prot_F-distichus_contig96952.19146.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig96952.19146.1
Unique Nameprot_F-distichus_contig96952.19146.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length281
Homology
BLAST of mRNA_F-distichus_contig96952.19146.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 5.510e-37
Identity = 89/270 (32.96%), Postives = 136/270 (50.37%), Query Frame = 0
Query:    2 EVHRRLAHPSEDITRKTVEMVGIETTDQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPKKYSSLGGNSYVVIFVDDCTHFEDVKFVNKKSDTAAALLSLVADYITPQKLS-TKCIRTDNCGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERTLRRLREKAIILMEELDNVINVLR----EKLWAQAMLFACDVTNKSVTTSTDEGKSSYELWFGKLPIADHLRPFGAVGYARQSMREHKMTPKGEECVFMGIPRNFP 265
            E H   AH  E + R T + +G +      AC  C   KA R  + ++T+ R+  +  R F D+GG K  +S+GG  Y +I  DD T    + F+  KSD  +A  + +A        S  + +R+DN G+F  G+F    +   I  E TP  +PQYNGVAER L  + E A+    +   +   ++    +KLWA+AM +AC+  N +  ++  +  S YE+W+G+ P      PF    Y R   R  K+ PKGE C ++G  R+ P
Sbjct:   36 EFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFADLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFSKPAYCRWQ-RPSKLLPKGESCFYVGPSRDHP 303          
BLAST of mRNA_F-distichus_contig96952.19146.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.110e-36
Identity = 98/279 (35.13%), Postives = 144/279 (51.61%), Query Frame = 0
Query:    2 EVHRRLAHPSEDITRKTVEMVGIETTDQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPKKYSSLGGNSYVVIFVDDCTHFEDVKFVNKKSDTAAALLSLVADYITPQKLS-TKCIRTDNCGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERTLRRLREKAIILMEELDNVINVLR----EKLWAQAMLFACDVTNKSVTTSTDEGKSSYELWFGKLPIADHLRPFGAV--GYARQSMREHKMTPKGEECVFMGIPRNFPTGTVSVL 272
            E H   AH  E + R T + +GIE T +  AC  C   KA +  +  +T+ R+  +  R FVD+GG K  +S+GG  Y +I  DD T    + F+  KSD A+A  S +A        S  + +R+DN GEF  GEF    +   I  E TP  +PQYNGVAER L  +   A+    +   +   ++    ++LWA+AM +AC+  N +  ++  + KS YE+W G+   A H RP+  +   Y R   R  K+ PKGE C ++G  R+ P     VL
Sbjct:  574 EFHNIYAHSHEGLLRTTAKRLGIELTGKMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRADGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGE---ASHARPYPFLKPAYCRWQ-RPSKLLPKGEACFYVGPSRDHPRDCHRVL 848          
BLAST of mRNA_F-distichus_contig96952.19146.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 5.750e-36
Identity = 94/277 (33.94%), Postives = 139/277 (50.18%), Query Frame = 0
Query:    2 EVHRRLAHPSEDITRKTVEMVGIETTDQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPKKYSSLGGNSYVVIFVDDCTHFEDVKFVNKKSDTAAALLSLVADYITPQKLS-TKCIRTDNCGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERTLRRLREKAIILMEELDNVINVLR----EKLWAQAMLFACDVTNKSVTTSTDEGKSSYELWFGKLPIADHLRPFGAVGYARQSMREHKMTPKGEECVFMGIPRNFPTGTVSVL 272
            E H   AH  + + R T + +G E   +   C  C   KA +  + ++T+ R+  +  R FVD+GG K  +S+GG  Y +I  DD T    + F+  KSD   A  S +A        S  + +R+DN GEF  GEF    +   I  E TP  +PQYNGVAER L  + E A+    +   +   ++    +KLWA+AM +AC+  N +  ++  + KS YE+W+G+ P      PF    Y R   R  K+ PKGE C ++G  R+ P     VL
Sbjct:  668 EFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQ-RPSKLLPKGESCFYVGPSRDHPRDCHRVL 942          
BLAST of mRNA_F-distichus_contig96952.19146.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 5.830e-36
Identity = 94/277 (33.94%), Postives = 139/277 (50.18%), Query Frame = 0
Query:    2 EVHRRLAHPSEDITRKTVEMVGIETTDQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPKKYSSLGGNSYVVIFVDDCTHFEDVKFVNKKSDTAAALLSLVADYITPQKLS-TKCIRTDNCGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERTLRRLREKAIILMEELDNVINVLR----EKLWAQAMLFACDVTNKSVTTSTDEGKSSYELWFGKLPIADHLRPFGAVGYARQSMREHKMTPKGEECVFMGIPRNFPTGTVSVL 272
            E H   AH  + + R T + +G E   +   C  C   KA +  + ++T+ R+  +  R FVD+GG K  +S+GG  Y +I  DD T    + F+  KSD   A  S +A        S  + +R+DN GEF  GEF    +   I  E TP  +PQYNGVAER L  + E A+    +   +   ++    +KLWA+AM +AC+  N +  ++  + KS YE+W+G+ P      PF    Y R   R  K+ PKGE C ++G  R+ P     VL
Sbjct:  375 EFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQ-RPSKLLPKGESCFYVGPSRDHPRDCHRVL 649          
BLAST of mRNA_F-distichus_contig96952.19146.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 6.180e-36
Identity = 97/286 (33.92%), Postives = 144/286 (50.35%), Query Frame = 0
Query:    2 EVHRRLAHPSEDITRKTVEMVGIETTDQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPKKYSSLGGNSYVVIFVDDCTHFEDVKFVNKKSDTAAALLSLVADY---ITPQKLSTKCIRTDNCGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERTLRRLREKAIILMEELDNVINVLR----EKLWAQAMLFACDVTNKSVTTSTDEGKSSYELWFGKLPIADHLRPFGAVGYARQSMREHKMTPKGEECVFMGIPRNFPTGTVSVLLVRSRNI 279
            E H   AH  E + R T + +G +      AC  C   KA R  + ++T+ R+  +  R FVD+GG K  +S+GG  Y +I  DD T    + F+  +SD   A  + +A     I P  +  + +R+DN GEF  GEF    +   I  E TP  +PQYNGVAER L  + E A+    +   +   ++    +KLWA+AM +AC+  N +  ++  +  S YE+W+G+ P      PF    Y R   R  K+ PKGE C ++G  R+ P     VL  R+R I
Sbjct:  256 EFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPSFV--EIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQ-RPTKLLPKGESCFYVGPSRDHPRDCHRVL-TRARTI 536          
BLAST of mRNA_F-distichus_contig96952.19146.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 6.640e-35
Identity = 94/277 (33.94%), Postives = 138/277 (49.82%), Query Frame = 0
Query:    2 EVHRRLAHPSEDITRKTVEMVGIETTDQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPKKYSSLGGNSYVVIFVDDCTHFEDVKFVNKKSDTAAALLSLVADYITPQKLS-TKCIRTDNCGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERTLRRLREKAIILMEELDNVINVLR----EKLWAQAMLFACDVTNKSVTTSTDEGKSSYELWFGKLPIADHLRPFGAVGYARQSMREHKMTPKGEECVFMGIPRNFPTGTVSVL 272
            E H   AH  E + R T + +G +      AC  C   KA R  +  +T+ R+  +  R FVD+GG K  +S+GG  Y +I  DD T    + F+  KSD  +A  + +A        S  + +R+DN GEF  GEF    +   I  E TP  +PQYNGVAER L  + E A+    +   +   ++    +KLWA+AM +AC+  N +  ++  +  S YE+W+G+ P      PF    Y R   R  K+ PKGE C ++G  R+ P     VL
Sbjct:  189 EFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVGETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQ-RPTKLLPKGESCFYVGPSRDHPRDCHRVL 463          
BLAST of mRNA_F-distichus_contig96952.19146.1 vs. uniprot
Match: B1PJ47_PHATR (Gag-pol polyprotein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B1PJ47_PHATR)

HSP 1 Score: 143 bits (360), Expect = 9.350e-35
Identity = 95/282 (33.69%), Postives = 148/282 (52.48%), Query Frame = 0
Query:    2 EVHRRLAHPSEDITRKTVEMVGIETTDQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPKKYSSLGGNSYVVIFVDDCTHFEDVKFVNKKSDTAAALLSLVADYITPQKLSTKCIRTDNCGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERTLRRLREKAIILMEELDNVINVLREKLWAQAMLFACDVTNKSVTTSTDEGKSSYELWFGKLP-IADHLRPFGAVGYARQSMR-EHKMTPKGEECVFMGIPRNFPTGTVSVLLVRSRNIVE 281
            E H +L H  E + +KT++   I+ T +  +CE C   KAK+ +V K T  RA   G+R FVD+ GP   + LG   Y +  VDD T    + FV K+SD +  L   V   +   +  TK +R DN GE +   ++  D++ +T E T PDTPQ NGV ER +  L+++A  +M   D +    R  LWA+A+  A D+ N S+ T +D  KS  +L+  +L  + D L  FG +GYA    + + K   K    + +G  +N    T  +   ++++I+E
Sbjct:  571 EAHDKLGHKGEVLLKKTLKHHSIKVTGELQSCEGCCLAKAKQKSVSKTTNIRAKSPGERLFVDMSGPFTATILGSR-YQIQVVDDATRKGFIGFVKKRSDLSQWLEENVLSKLEGMQKQTKYLRADNAGENKNPLEKLCDKKGMTLELTAPDTPQQNGVVERRIAVLQQRANAMMMAAD-LTPEARALLWAEALNTANDLENISLNTMSD--KSPDKLFSNELTKLMDRLVEFGRIGYATIRRKFKGKWKEKSLRVIMVGYAKNHSADTYRLYNPQNKSIIE 848          
BLAST of mRNA_F-distichus_contig96952.19146.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.510e-34
Identity = 93/277 (33.57%), Postives = 138/277 (49.82%), Query Frame = 0
Query:    2 EVHRRLAHPSEDITRKTVEMVGIETTDQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPKKYSSLGGNSYVVIFVDDCTHFEDVKFVNKKSDTAAALLSLVADYITPQKLS-TKCIRTDNCGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERTLRRLREKAIILMEELDNVINVLR----EKLWAQAMLFACDVTNKSVTTSTDEGKSSYELWFGKLPIADHLRPFGAVGYARQSMREHKMTPKGEECVFMGIPRNFPTGTVSVL 272
            E H   AH  E + R T + +G +      AC  C   KA R  + ++T+ R+  +  R FVD+GG K  +S+GG  Y +I  DD T    + F+  KSD  +A  + +A        S  + +R+DN GEF  GEF    +   I  E TP  +PQYNGVAER L  + E A+    +   +   ++    +KLWA+AM +AC+  N +  ++  +    YE+W+G+ P      PF    Y R   R  K+ PKGE C ++G  R+ P     VL
Sbjct:  134 EFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMPPYEMWYGE-PRPARPYPFLKPAYCRWQ-RPTKLLPKGESCFYVGPSRDHPRDCHRVL 408          
BLAST of mRNA_F-distichus_contig96952.19146.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 4.230e-34
Identity = 92/275 (33.45%), Postives = 139/275 (50.55%), Query Frame = 0
Query:    4 HRRLAHPSEDITRKTVEMVGIETTDQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPKKYSSLGGNSYVVIFVDDCTHFEDVKFVNKKSDTAAALLSLVADYITPQKLST-KCIRTDNCGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERTLRRLREKAIILMEELDNVINVLR----EKLWAQAMLFACDVTNKSVTTSTDEGKSSYELWFGKLPIADHLRPFGAVGYARQSMREHKMTPKGEECVFMGIPRNFPTGTVSVL 272
            H    H  E + R T + +GIE T +  AC  C   KA R A+   T   +  +  R FV++GG K  +S+GG  Y +I  DD T    + F+  KSD  +A  S +A+       S  + +R+DN GEF  GEF    +   I  E TP  +P++NGVAER L  + E A+    +   +   ++    ++LWA+AM +AC+  N +  ++  + KS YE+W+G+   A    PF    Y +   R  K+ PKGE C ++G  R+ P     VL
Sbjct:  397 HNIYGHAHEGMLRTTAKRLGIELTGKMHACSGCSMGKAIRKAIAHVTTNSSDKKLGRVFVNLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY-PFLKPAYCKWQ-RPSKLLPKGESCFYVGPSRDHPRDCHRVL 669          
BLAST of mRNA_F-distichus_contig96952.19146.1 vs. uniprot
Match: A0A6H5LL52_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL52_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 3.800e-33
Identity = 89/269 (33.09%), Postives = 132/269 (49.07%), Query Frame = 0
Query:    4 HRRLAHPSEDITRKTVEMVGIETTD-QWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPKKYSSLGGNSYVVIFVDDCTHFEDVKFVNKKSDTAAALLSLVADYITPQKLSTKC----IRTDNCGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERTLRRLREKAIILMEELDNVIN--VLREKLWAQAMLFACDVTNKSVTTSTDEGKSSYELWFGKLPIADHLRPFGAVGYARQSMREHKMTPKGEECVFMGIPRNFP 265
            H    H  E++ +KT +  G++ T      C  C   K +   + K T+ RA+ +  R F+++GG  ++ S+GGN Y +I  DDCT +  V F+  KSD AAA    +ADY   +  +  C     RTD  GEF+G+F     R  I  E TPP+TP+YNGVAER L  L + A+    +   +     +   LWA+A+  AC   N + TT     KS  EL+ G  P      PF       +S R+ +  P+  +   +G+P   P
Sbjct:  139 HNSHGHTHEELLQKTAKQQGVQLTGGPLLPCLGCSMSKGQVKPISKSTDTRAANKLFRLFLNLGGRMQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEQYLADY---RAETVPCEVFVARTDGGGEFQGQFAEVCRRSGIKQEFTPPNTPKYNGVAERALGLLADSALASRIQAKEMFPDAPVSPGLWAEAISCACHQMNCTATTGNPGHKSPEELFHGTPPPVGSTHPF-LKPLVFKSRRKARSQPRARKDGTLGLPTITP 403          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96952.19146.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVR5_9PHAE5.510e-3732.96Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K2M6_9PHAE1.110e-3635.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBA7_9PHAE5.750e-3633.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE5.830e-3633.94Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV76_9PHAE6.180e-3633.92Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JRL9_9PHAE6.640e-3533.94Integrase catalytic domain-containing protein n=2 ... [more]
B1PJ47_PHATR9.350e-3533.69Gag-pol polyprotein n=1 Tax=Phaeodactylum tricornu... [more]
A0A6H5L3Y0_9PHAE1.510e-3433.57Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JH25_9PHAE4.230e-3433.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LL52_9PHAE3.800e-3333.09Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..189
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 4..170
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 47..247
e-value: 1.8E-21
score: 78.2
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 58..170
e-value: 1.4E-12
score: 47.8
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 43..224
score: 16.512
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 4..170
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 59..232

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..189
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 4..170
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 47..247
e-value: 1.8E-21
score: 78.2
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 58..170
e-value: 1.4E-12
score: 47.8
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 43..224
score: 16.512
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 4..170
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 59..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig96952contigF-distichus_contig96952:419..1261 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig96952.19146.1mRNA_F-distichus_contig96952.19146.1Fucus distichus monoicousmRNAF-distichus_contig96952 419..1273 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig96952.19146.1 ID=prot_F-distichus_contig96952.19146.1|Name=mRNA_F-distichus_contig96952.19146.1|organism=Fucus distichus monoicous|type=polypeptide|length=281bp
MEVHRRLAHPSEDITRKTVEMVGIETTDQWGACETCFQVKAKRHAVPKKT
EERASVRGQRFFVDVGGPKKYSSLGGNSYVVIFVDDCTHFEDVKFVNKKS
DTAAALLSLVADYITPQKLSTKCIRTDNCGEFEGEFQRELDRRSITHEHT
PPDTPQYNGVAERTLRRLREKAIILMEELDNVINVLREKLWAQAMLFACD
VTNKSVTTSTDEGKSSYELWFGKLPIADHLRPFGAVGYARQSMREHKMTP
KGEECVFMGIPRNFPTGTVSVLLVRSRNIVE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf