prot_F-distichus_contig9695.19145.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-distichus_contig9695.19145.1
Unique Name	prot_F-distichus_contig9695.19145.1
Type	polypeptide
Organism	Fucus distichus monoicous (Fucus distichus monoicous)
Sequence length	193

Homology

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BLAST of mRNA_F-distichus_contig9695.19145.1 vs. uniprot
Match: D7FRU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU6_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 7.980e-41
Identity = 91/193 (47.15%), Postives = 112/193 (58.03%), Query Frame = 0

Query:    1 KQLGKRWRCTIPLWWPYRTNRRWFAAWDLLRRTLLTGLLTLVPVDEGGAERVTVACAIAGLSLVVAEVARPHRDPWIGWIYRMGGVMILLVDMLGVLQQVSSAGSATPSVATVXXXXXXXXXXXXXXXXICCGWRLSCAEQREGTFTAAAAIPWPESASYRRHPSGVGEGAGNSPDHGDNDSDQVKCSSNFPP 193
            K+  +RWR TIP+W PY+  R+ FAAW++ RR LLTG LT VP  EG   RV VACA+AG+SLVV EV RPHRDPWIGW+YR GG  ILL ++ G+ Q++ +A + +P V  V                +C GWRLSCAEQ      AAA IP  +S S    PS VG   G     GD  S   +     PP
Sbjct: 1132 KRNNRRWRSTIPVWSPYKAGRQGFAAWEIGRRLLLTGFLTAVPPGEGFM-RVAVACALAGVSLVVGEVVRPHRDPWIGWVYRGGGFAILLANLTGLAQKIGAADTGSPWV--VVSAGIFISLVLALAVCLCGGWRLSCAEQGSSAAAAAAIIPRRDSRSA--FPSVVGPSVGGDHHDGDLGSSSTRGRQKAPP 1319

[Close]

BLAST of mRNA_F-distichus_contig9695.19145.1 vs. uniprot
Match: A0A6H5KU24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU24_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 5.000e-40
Identity = 90/179 (50.28%), Postives = 109/179 (60.89%), Query Frame = 0

Query:    1 KQLGKRWRCTIPLWWPYRTNRRWFAAWDLLRRTLLTGLLTLVPVDEGGAERVTVACAIAGLSLVVAEVARPHRDPWIGWIYRMGGVMILLVDMLGVLQQVSSAGSATPSVATVXXXXXXXXXXXXXXXXICCGWRLSCAEQREGTFTAAAAIPWPESASYRRHPSGVGEGAGNSPDHGD 179
            K+  +RWR TIP+W PY+  R+ FAAW+L RR LLTG LT VP  EG   RV VACA+AG+SLVV EV RPHRDPWIGW+YR GG+ ILL ++ G+ Q+  +A + +P V  V                +C GWRLSCAEQ  G+  AAAA   P   S    PS VG   G   DH D
Sbjct:  454 KRNNRRWRSTIPVWSPYKAGRQGFAAWELGRRLLLTGFLTAVPPGEGFM-RVAVACALAGVSLVVGEVVRPHRDPWIGWVYRGGGLAILLANLTGLAQKTGAADTGSPLV--VVSAGIFISLMLALAVCLCGGWRLSCAEQ--GSSAAAAAAIIPRRDSRPAFPSVVGPSVGG--DHHD 625

The following BLAST results are available for this feature:

BLAST of mRNA_F-distichus_contig9695.19145.1 vs. uniprot

BLAST of mRNA_F-distichus_contig9695.19145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FRU6_ECTSI	7.980e-41	47.15	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KU24_9PHAE	5.000e-40	50.28	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 99..109
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 79..98
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 135..193
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..78
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 110..134
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..49 score: 0.469
None	No IPR available	TMHMM	TMhelix		coord: 110..132
None	No IPR available	TMHMM	TMhelix		coord: 78..100

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 99..109
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 79..98
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 135..193
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..78
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 110..134
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..49 score: 0.469
None	No IPR available	TMHMM	TMhelix		coord: 110..132
None	No IPR available	TMHMM	TMhelix		coord: 78..100

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-distichus_contig9695	contig	F-distichus_contig9695:9343..10865 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Fucus distichus monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-distichus_contig9695.19145.1	mRNA_F-distichus_contig9695.19145.1	Fucus distichus monoicous	mRNA	F-distichus_contig9695 9343..10865 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-distichus_contig9695.19145.1 ID=prot_F-distichus_contig9695.19145.1|Name=mRNA_F-distichus_contig9695.19145.1|organism=Fucus distichus monoicous|type=polypeptide|length=193bp
KQLGKRWRCTIPLWWPYRTNRRWFAAWDLLRRTLLTGLLTLVPVDEGGAE
RVTVACAIAGLSLVVAEVARPHRDPWIGWIYRMGGVMILLVDMLGVLQQV
SSAGSATPSVATVTVSVIFLLFLSLMLLCICCGWRLSCAEQREGTFTAAA
AIPWPESASYRRHPSGVGEGAGNSPDHGDNDSDQVKCSSNFPP