prot_F-distichus_contig9651.19109.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig9651.19109.1
Unique Nameprot_F-distichus_contig9651.19109.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length503
Homology
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BLAST of mRNA_F-distichus_contig9651.19109.1 vs. uniprot
Match: D8LNR2_ECTSI (Zinc finger, C2H2 type family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNR2_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 8.810e-14
Identity = 82/192 (42.71%), Postives = 98/192 (51.04%), Query Frame = 0 
Query:  257 GRG--KREGYRSQMTPNPSRGSFKL-HRGAVTGIGGVKWKSGPTGEE-VAVDKHQLRRNLTLLKKKMHSAQTGTFADRRRSQSAGSRSGELSGDPDGADVIKA-VDRRYPGYGGGHQHLHPPHTTSGTAPAVMSTMSKSTMPMSTTPISVMLEASCRDGFSMAREPR-VDGQSRPPA--EGPGSPYTVDSSS 440
            GRG   R GYR+QM P+PS G+    +RG     GG      P  E  V  +K QLRRNL+LLKKKMH  Q G+    RRSQSAG R+GEL GDP+ A      VD    G  GG QHLH    T+GTAPA+M             P         RD    A   R V G +R     +GPGSPY +D ++
Sbjct:  502 GRGGAPRLGYRTQMMPSPSTGNLTAAYRGGGDRFGGDDEGMNPPVERGVPAEKEQLRRNLSLLKKKMHG-QAGS----RRSQSAGPRAGELFGDPNAAPSGPGGVDSHLEG--GGRQHLH---MTTGTAPAMM-------------PADPGAFLRDRDAAERALGRRGVGGGARXXXXPDGPGSPYAIDPNA 670
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9651.19109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNR2_ECTSI8.810e-1442.71Zinc finger, C2H2 type family protein n=2 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9651contigF-distichus_contig9651:6656..11033 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9651.19109.1mRNA_F-distichus_contig9651.19109.1Fucus distichus monoicousmRNAF-distichus_contig9651 6656..11034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig9651.19109.1 ID=prot_F-distichus_contig9651.19109.1|Name=mRNA_F-distichus_contig9651.19109.1|organism=Fucus distichus monoicous|type=polypeptide|length=503bp
FREDPRDWSERDLLGTVASRRRDSYGTGEGIVYPAAMSLPDGNGRSVGHV
VCGSNGKEAGTSDNEAFAWSISGEGGRCRRSQNGDSKRGARRQAKRPEWN
SETAEAGPLSGPPGNLTDNSSAAVQRRTSASRNGSSKNHTTDCSSNNNFG
EDSGNRRSSNGGYTRYTGSRNVDDDYHGYLYSNSAGETVLEDRHARAYSN
SNSTAELAADLAAQEEDLECRKGGGSGERMTGLGSSRVPPTLSAGGHGHG
HGHGAAGRGKREGYRSQMTPNPSRGSFKLHRGAVTGIGGVKWKSGPTGEE
VAVDKHQLRRNLTLLKKKMHSAQTGTFADRRRSQSAGSRSGELSGDPDGA
DVIKAVDRRYPGYGGGHQHLHPPHTTSGTAPAVMSTMSKSTMPMSTTPIS
VMLEASCRDGFSMAREPRVDGQSRPPAEGPGSPYTVDSSSCTNVHRDLHR
DAMERGLADHASRNGKILLVKRGSSHAAKASTTHGGQSESGSIELKGRGG
FMS
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