prot_F-distichus_contig9640.19097.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig9640.19097.1
Unique Nameprot_F-distichus_contig9640.19097.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length475
Homology
BLAST of mRNA_F-distichus_contig9640.19097.1 vs. uniprot
Match: A0A6H5KT61_9PHAE (Hira domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT61_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 9.740e-62
Identity = 146/262 (55.73%), Postives = 166/262 (63.36%), Query Frame = 0
Query:    1 MPLVMLASPGAFGGSLQAFALHQGMGTWIRVADGRFALSDFYSSGPCTSGASRGGVLSALQTGVRVASSPTPAVLLQASRAGTRPAGSSGTTLTEAAIAATGGVRRESLQSAVTRGHLEESLGNTVLFGSSQEFVDVLRAYAGHLAKSAGFGDGRIRALCDKLLLAANTHSQSGGMESMSGGVMAVAGCEAVESTRRGEILGLRLGNGPSVLGLSKIDLLKDVVLPALSGNRSLQRLVSEYYDTLEMSC----ELLPPPARP 258
            MPLVMLA  GA GGSLQAF  H G+ TW+RVADGR ALSDFYSSGPCTS ++RGGVLSALQ GVR  +SP+P  +LQAS+AG RPA         AA+A  G   RESL                       EF DVLRAYAGHLAKSAG+G+GR+R LCDKL+LA+    +   +    G             T  GE+ GLRL NGPS+LGL K+ LL  VVLPALSGNRSLQRLVSEYYD LE       + LPPPA P
Sbjct:  871 MPLVMLACHGAPGGSLQAFTFHLGLETWVRVADGRSALSDFYSSGPCTSPSTRGGVLSALQRGVRSGASPSPGAILQASKAGKRPA---------AAMA--GAPARESLXXXXXXXXXXXXXXXXXXXXXXXEFEDVLRAYAGHLAKSAGYGEGRVRTLCDKLMLASIGVGKGANIGGDGGSGXXXXXXXXXXXT--GELPGLRLCNGPSILGLDKLHLLSKVVLPALSGNRSLQRLVSEYYDNLEYVSKSRRQQLPPPAPP 1119          
BLAST of mRNA_F-distichus_contig9640.19097.1 vs. uniprot
Match: A0A836CIQ6_9STRA (Protein HIRA n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIQ6_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 4.220e-18
Identity = 89/231 (38.53%), Postives = 111/231 (48.05%), Query Frame = 0
Query:   27 TWIRVADGRFALSDFYSS---------GPCTSGASR------GGVLSALQTGVRVASSPTPAVLLQASRAGTRPAGSSGTTLTEAAIAATGGVRRESLQSAVTRGHLEESLGNTVLFGSSQEFVDVLRAYAGHLAKSAGFGDGRIRALCDKLLLAANTHSQSGGMESMSGGVMAVAGCEAVESTRRG-EILGLRLGNGPSVLGLSKIDLLKDVVLPALSGNRSLQRLVSEY 241
            TW+RVADGR ALS F++S          P TS A        G V+  LQ  VR  +  T + +   + A   P        T    AA GG     LQ +VTR HLEESL   +   S  EF  VL  YA HLA      + RIR+LCD+L   A   SQ+                 +  + R G  +LGLRLG G  VLG  +  LL+ +VLPALS N ++QRLV EY
Sbjct:  741 TWLRVADGRHALSSFHTSLATSTSSLAAPSTSSADAALDLQPGAVVERLQASVRRGARVTASGISSVATADIMPL-----LTTLPGEAAAGGA----LQHSVTRAHLEESLNCALALSSRLEFERVLGLYARHLAAPGRVDELRIRSLCDRLSAPAADASQT-----------------STSTERAGVPLLGLRLGPGFEVLGAPRQQLLERIVLPALSSNSAVQRLVQEY 945          
BLAST of mRNA_F-distichus_contig9640.19097.1 vs. uniprot
Match: A0A7S2UMJ9_9STRA (Protein HIRA n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMJ9_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 5.910e-13
Identity = 80/231 (34.63%), Postives = 108/231 (46.75%), Query Frame = 0
Query:   13 GGSLQAFALHQGMGTWIRVADGRFALSDFYSSGPCTSGASRGGVLSALQTGVRVASSPTPAVLLQASRAGTRPAGSSGTTLTEAAIAATGGVRRESLQSAV-TRGHLEESLGNTVLFGSSQEFVDVLRAYAGHLAKSAGFGDGR--IRALCDKLLLAANTHSQSGGMESMSGGVMAVAGCEAVESTRRGEILGLRLGNGPSVLGLSKIDLLKDVVLPALSGNRSLQRLVSE 240
            GGSLQAF   + M  WIRV+D RF+LSDFYSS P    A    VLS +    RV          +AS   +R  G   ++L E       G  RES  SAV TR H E+ +   +   S  EF   L  Y   L         R  +  L  +LL ++NT  +S   ++          C               L +  SV GL+K+DL++D+V+P +S NR+LQRLV+E
Sbjct:  570 GGSLQAFVYDRQMELWIRVSDSRFSLSDFYSSRPSLK-AGTTAVLSQIDDSTRV----------EASAFSSRRGGDITSSLYE------NGEERESSTSAVITRSHCEDRMACALALSSVLEFKHWLSLYVRQLTVEGNIAHLRFVVDMLIGRLLASSNTSEESDKPQAQY--------C-------------WWLSSADSVFGLAKMDLVRDIVVPEMSKNRALQRLVNE 762          
BLAST of mRNA_F-distichus_contig9640.19097.1 vs. uniprot
Match: A0A7S2WVS7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVS7_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 7.340e-13
Identity = 76/235 (32.34%), Postives = 100/235 (42.55%), Query Frame = 0
Query:    7 ASPGAFGGSLQAFALHQGMGTWIRVADGRFALSDFYSSGPCTSGASRGGVLSALQTGVRVASSPTPAVLLQASRAGTRPAGSSGTTLTEAAIAATGGVRRESLQSAVTRGHLEESLGNTVLFGSSQEFVDVLRAYAGHLAKSAGFGDGRIRALCDKLLLAANTHSQSGGMESMSGGVMAVAGCEAVESTRRGEILGLRLGNGPSVLGLSKIDLLKDVVLPALSGNRSLQRLVSEY 241
            +SP     S++AF LHQG+GTW+RV DGRF  SDF+S  P  S   + G    LQ     +SSP PA  L    +   P+G                      Q+ +T  HLEE L  T    SS EF +  + Y   L    G  + R+R +CD LL ++   S   G                   T  G + GL   +G         +LL+ VV PA +G  S QRL  EY
Sbjct:  488 SSPARTHSSVEAFVLHQGLGTWLRVGDGRFFASDFFSMLPPVS---KSGPAERLQAECAASSSPPPASALLRLDSHGEPSG---------------------FQAGLTLAHLEERLAATAALRSSHEFREWFQRYVRALVAMGG--ESRLRLVCDVLLSSSLQGSFPPG-------------------TLLGTLSGLATDSGH--------ELLEKVVFPACAGTSSFQRLALEY 669          
BLAST of mRNA_F-distichus_contig9640.19097.1 vs. uniprot
Match: A0A1Y2GTF8_9FUNG (Protein HIR n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GTF8_9FUNG)

HSP 1 Score: 66.6 bits (161), Expect = 6.570e-8
Identity = 67/231 (29.00%), Postives = 93/231 (40.26%), Query Frame = 0
Query:   17 QAFALHQGMGTWIRVADGRFALSDFYSSGPCTSGASRGGVLSALQTGVRVASSPTPAVLLQASRAGTRPAGSSGTTLTEAAIAATGGVRRESLQSAVTRGHLEESLGNTVLFGSSQEFVDVLRAYAGHLAKSAGFGDGRIRALCDKLLLAANTHSQSGGMESMSGGVMAVAGCEAVESTRRGEILGLRLGNGPSVLGLSKIDLLKDVVLPALSGNRSLQRLVSEYYDTLEM 247
            Q +  H+ M TW++V D  FA+S F+ + P   G    G ++A         S    +L Q   A T      G    + A A       +S+Q  VT  HLE  +    + GSS E+   LR Y   LA  +     R+  LC  LL          G +                               P++LG  K +LL+++ LP LS NRSLQR+V EY   LEM
Sbjct:  768 QGYTYHEMMRTWVKVVDPWFAISSFFGTDPMLGGRDSFGDIAAPSV------SQKKGILSQLQAAAT-----GGRLEKDVAFAQELLNVEDSVQGVVTLTHLENQMAAAQVLGSSTEYKQWLRCYVQRLADESSVA--RVEELCKFLLGPVYQGGDKSGWQ-------------------------------PTILGFQKHELLREL-LPVLSSNRSLQRIVKEYLSGLEM 953          
BLAST of mRNA_F-distichus_contig9640.19097.1 vs. uniprot
Match: A0A7R9XM61_9CHLO (Hypothetical protein n=1 Tax=Polyblepharides amylifera TaxID=1486889 RepID=A0A7R9XM61_9CHLO)

HSP 1 Score: 59.7 bits (143), Expect = 2.620e-7
Identity = 48/129 (37.21%), Postives = 61/129 (47.29%), Query Frame = 0
Query:  117 HLEESLGNTVLFGSSQEFVDVLRAYAGHLAKSAGFGDGRIRALCDKLLLAANTHSQSGGMESMSGGVMAVAGCEAVESTRRGEILGLRLGNGPSVLGLSKIDLLKDVVLPALSGNRSLQRLVSEYYDTL 245
            HLE  + +  +  S  E+   L  YA HLAK A   + R+R LC  L+        +G                   ST  G I     G  P++LGLSK DLLK  VLPA+S NR +QRL+SE  D L
Sbjct:    7 HLESLIASANVLNSPHEYSKWLITYARHLAKDAD--ENRLRELCLDLIGPVRQFRSNG----------------VGPSTWSGSIDVSEDGWKPNILGLSKRDLLKRGVLPAMSTNRQMQRLLSEISDML 117          
BLAST of mRNA_F-distichus_contig9640.19097.1 vs. uniprot
Match: A0A1Y1I787_KLENI (Protein HIRA n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I787_KLENI)

HSP 1 Score: 63.9 bits (154), Expect = 4.590e-7
Identity = 66/238 (27.73%), Postives = 93/238 (39.08%), Query Frame = 0
Query:   17 QAFALHQGMGTWIRVADGRFALSDFYS-SGPCTSGASRGGVLSALQTGVRVASSPTPAVLLQASRAGTRPAGSSGTTLTEAAIAATGGVRRESLQ----------SAVTRGHLEESLGNTVLFGSSQEFVDVLRAYAGHLAKSAGFGDGRIRALCDKLLLAANTHSQSGGMESMSGGVMAVAGCEAVESTRRGEILGLRLGNGPSVLGLSKIDLLKDVVLPALSGNRSLQRLVSEYYD 243
            +A   H GM  W+R+AD  F  S+F S  G   SG  +  +                                   T+ +A +AA G  RR               A +R HLE  L   V   S  E+   L AYA HL + A   +GR+R LC + L    + S+                                   G SVLG+SK +LL+ V+LPA+S NR++QRL++E+ D
Sbjct:  786 EAHMYHLGMRCWLRIADESFPASEFTSVRGADASGHEKEDL-----------------------------------TVLQAEVAAQGRGRRGLFNPLLDISAAEGQAQSRAHLESQLAAAVTMNSPTEYKRWLTAYARHLTREAD--EGRLRELCQEFLAPTGSGSE-----------------------------------GASVLGMSKRELLQAVILPAMSANRAVQRLLNEFLD 951          
BLAST of mRNA_F-distichus_contig9640.19097.1 vs. uniprot
Match: A0A7S1VV58_9STRA (Protein HIRA n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV58_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 7.210e-7
Identity = 71/228 (31.14%), Postives = 100/228 (43.86%), Query Frame = 0
Query:   13 GGSLQAFALHQGMGTWIRVADGRFALSDFYSSGPCTSGASRGGVLSALQTGVRVASSPTPAVLLQASRAGTRPAGSSGTTLTEAAIAATGGVRRESLQSAVTRGHLEESLGNTVLFGSSQEFVDVLRAYAGHLAKSAGFGDGRIRALCDKLLLAANTHSQSGGMESMSGGVMAVAGCEAVESTRRGEILGLRLGNGPSVLGLSKIDLLKDVVLPALSGNRSLQRLVSE 240
            GGSLQAF   + +  W+R+AD RF LSDFYS  P    ASR G L+ +   VR  SS      ++A R     +   G    E  + A             +R H E+ +   V  GSS EF   L  Y    A S G  + ++R L D ++          G +S           EA+  T         L +   +LG ++  L++  V+P +S NRSLQRL +E
Sbjct:  542 GGSLQAFLYDRSLELWMRMADSRFVLSDFYSILPSVRTASRKGDLAGMDDAVRGGSSSGS---IRAKRRNHDTSAMYGAPSGEGNLLA-------------SRSHCEDRMACAVALGSSHEFESWLVNYV--RALSIGGFEDQLRLLVDLIV----------GDDSR----------EALSKTPSC----WWLSSATQLLGFNRKTLVRKAVIPEMSKNRSLQRLTNE 727          
BLAST of mRNA_F-distichus_contig9640.19097.1 vs. uniprot
Match: A0A0M0JKY7_9EUKA (Protein hira-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JKY7_9EUKA)

HSP 1 Score: 59.7 bits (143), Expect = 1.330e-6
Identity = 70/222 (31.53%), Postives = 94/222 (42.34%), Query Frame = 0
Query:   25 MGTWIRVADGRFALSDFYSSGPCTSGASRGGVLSALQTGVRVASSPTPAVLLQASRAGTRPAGSSGTTLTEAAIAATGGVRRESLQSAVTRGHLEESLGNTVLFGSSQEFVDVLRAYAGHLAKSAG-FGDGRIRALCDKLLLAANTHSQSGGMESMSGGVMAVAGCEAVESTRRGEILGLRLGNGPSVLGLSKIDLLKDVVLPALSGNRSLQRLVSEYYDTL 245
            M  W+ + D  F  S++ SS P T G   GG  SA+  G   + S            G   A ++    + AAI           Q  V+  HLE  L          E+   LR YA  LA   G   + ++R LCD+LL   +  S S   +    G    A   A E           L   P VLGL K  LL++VVLP L+ NR+LQR+++EY D L
Sbjct:    1 MQAWLALGDEAFGASEYRSSLPSTFGP--GG--SAVMGGSAASDSXXXXXXXXXXXXGRHEASAARLAASLAAIP-------PDEQRLVSFAHLEHQLAACREIRQPAEYSAWLRVYAHALADKGGQLAERQVRELCDELLGPLDQPSLSSHSQPSLDGAPTAAHTPAAEMAETAP-----LAWQPGVLGLCKRMLLREVVLPELTTNRALQRILTEYLDQL 206          
BLAST of mRNA_F-distichus_contig9640.19097.1 vs. uniprot
Match: A0A1Z5JDQ7_FISSO (Protein HIRA n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDQ7_FISSO)

HSP 1 Score: 57.8 bits (138), Expect = 4.020e-5
Identity = 71/235 (30.21%), Postives = 97/235 (41.28%), Query Frame = 0
Query:   13 GGSLQAFALHQGMGTWIRVADGRFALSDFYSSGPCTSGASR------GGVLSALQTGVRVASSPTPAVLLQASRAGTRPAGSSGTTLTEAAIAATGGVRRESLQSAVTRGHLEESLGNTVLFGSSQEFVDVLRAYAGHLAKSAGF-GDGRIRALCDKLLLAANTHSQSGGMESMSGGVMAVAGCEAVESTRRGEILGLRLGNGPSVLGLSKIDLLKDVVLPALSGNRSLQRLVSE 240
            GGS+Q+F  +     W+R+AD RF LSDFYSS P  S A R         L AL++ ++ +     A+ LQ S         SG  L                    TR H E+ L   V F S  E+    R + G L +     GD     L  +++L        G   S++ GV     C               L   P VL   + +L++ VVLP +S NRSLQRL +E
Sbjct:  889 GGSVQSFVYNDMSELWMRLADSRFVLSDFYSSLPSRSPAGRLTEIDDSVKLGALESTLKASHRNASAIYLQGSE-------KSGNFL-------------------ATRAHCEDRLACAVAFESGPEY----RLWLGRLVRILSITGDETGLRLLTEMIL--------GRGPSLTNGVGNDDSC-------------WWLSLSPEVLKQDRKELIQSVVLPEMSKNRSLQRLTNE 1072          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9640.19097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5KT61_9PHAE9.740e-6255.73Hira domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836CIQ6_9STRA4.220e-1838.53Protein HIRA n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S2UMJ9_9STRA5.910e-1334.63Protein HIRA n=2 Tax=Attheya septentrionalis TaxID... [more]
A0A7S2WVS7_9STRA7.340e-1332.34Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Y2GTF8_9FUNG6.570e-829.00Protein HIR n=1 Tax=Lobosporangium transversale Ta... [more]
A0A7R9XM61_9CHLO2.620e-737.21Hypothetical protein n=1 Tax=Polyblepharides amyli... [more]
A0A1Y1I787_KLENI4.590e-727.73Protein HIRA n=1 Tax=Klebsormidium nitens TaxID=10... [more]
A0A7S1VV58_9STRA7.210e-731.14Protein HIRA n=1 Tax=Grammatophora oceanica TaxID=... [more]
A0A0M0JKY7_9EUKA1.330e-631.53Protein hira-like protein n=1 Tax=Chrysochromulina... [more]
A0A1Z5JDQ7_FISSO4.020e-530.21Protein HIRA n=1 Tax=Fistulifera solaris TaxID=151... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011494TUP1-like enhancer of splitPFAMPF07569Hiracoord: 17..163
e-value: 2.5E-11
score: 43.7
IPR031120WD repeat HIR1PANTHERPTHR13831MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINScoord: 16..247
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..474

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011494TUP1-like enhancer of splitPFAMPF07569Hiracoord: 17..163
e-value: 2.5E-11
score: 43.7
IPR031120WD repeat HIR1PANTHERPTHR13831MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINScoord: 16..247
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..474

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9640contigF-distichus_contig9640:8320..11309 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9640.19097.1mRNA_F-distichus_contig9640.19097.1Fucus distichus monoicousmRNAF-distichus_contig9640 7421..11338 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig9640.19097.1 ID=prot_F-distichus_contig9640.19097.1|Name=mRNA_F-distichus_contig9640.19097.1|organism=Fucus distichus monoicous|type=polypeptide|length=475bp
MPLVMLASPGAFGGSLQAFALHQGMGTWIRVADGRFALSDFYSSGPCTSG
ASRGGVLSALQTGVRVASSPTPAVLLQASRAGTRPAGSSGTTLTEAAIAA
TGGVRRESLQSAVTRGHLEESLGNTVLFGSSQEFVDVLRAYAGHLAKSAG
FGDGRIRALCDKLLLAANTHSQSGGMESMSGGVMAVAGCEAVESTRRGEI
LGLRLGNGPSVLGLSKIDLLKDVVLPALSGNRSLQRLVSEYYDTLEMSCE
LLPPPARPLVPASIAPASRRLENGAPPPLTSSSAGGGSEPSQSISNTSAI
TPVAGRDGSTRPAPRSNPDAESSLGSSSAIGIAIDNDKLPLGSVEYGRDR
ADPDPGRSYKQKRLQLKEGGNNAAAVDMRRPADSASRGLGANSLSRDIND
SYAAGCNTDVGNIAQENGRTCADVGSSGGPEGVQKGVSRGNGSLETAGKS
GVYAEGGAPPSGDSVNAATVMATR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011494Hira
IPR031120HIR1