prot_F-distichus_contig96096.19065.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig96096.19065.1
Unique Nameprot_F-distichus_contig96096.19065.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length147
Homology
BLAST of mRNA_F-distichus_contig96096.19065.1 vs. uniprot
Match: D8LF40_ECTSI (Putative two-pore calcium channel (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF40_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 5.720e-73
Identity = 122/147 (82.99%), Postives = 133/147 (90.48%), Query Frame = 0
Query:    1 RTAILSLRTRPFRRFYAVVSNMLPGFLRVCLPVLFFLLLSASYAALAFGRAKQDFEDPTAAGYAIWILMVCADNYETLVNEPSRHPVYVPFVVMIIVVGSMFLLSLLLGVTYDVFIEHTTEQVKSERLKELKGLNMAFATLDPTVRG 147
            R AILS+RTR  RRFYAVVS MLPGFLRVCLPV+FFLLLSASYAAL+FGRAK DFEDP+ AGYAIWILMVCADNYE LV++ S HP YVPF+VM+IVVGSMFLLSLLLGVTYDVFIEHTTEQV  ER+KELKGLN+AFAT+DPT  G
Sbjct:  232 RPAILSVRTRHIRRFYAVVSQMLPGFLRVCLPVVFFLLLSASYAALSFGRAKSDFEDPSTAGYAIWILMVCADNYEALVHDRSTHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTEQVNQERMKELKGLNVAFATMDPTGTG 378          
BLAST of mRNA_F-distichus_contig96096.19065.1 vs. uniprot
Match: A0A6H5KF87_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF87_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 6.660e-69
Identity = 119/151 (78.81%), Postives = 133/151 (88.08%), Query Frame = 0
Query:    1 RTAILSLRTRPFRRFYAVVSNMLPGFLRVCLPVLFFLLLSASYAALAFGRAKQDFEDPTAAGYAIWILMVCADNYETLVNEPSRHPVYVPFVVMIIVVGSMFLLSLLLGVTYDVFIEHTTEQVKS----ERLKELKGLNMAFATLDPTVRG 147
            R AILS+RTR  RRFYAVVS MLPGFLRVCLP++FFLLLSASYAAL+FGRAK +FEDP+ AGYAIWILMVCADNYE LV++ S HP YVPF+VM+IVVGSMFLLSLLLGVTYDVFIEHTTEQ +S    ER+KELKGLN+AFAT+DP   G
Sbjct:  232 RPAILSVRTRHIRRFYAVVSQMLPGFLRVCLPIVFFLLLSASYAALSFGRAKSEFEDPSTAGYAIWILMVCADNYEALVHDRSTHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTEQARSTVNQERMKELKGLNVAFATMDPMGTG 382          
BLAST of mRNA_F-distichus_contig96096.19065.1 vs. uniprot
Match: A0A7S3M3M3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M3M3_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 5.540e-19
Identity = 52/142 (36.62%), Postives = 81/142 (57.04%), Query Frame = 0
Query:    7 LRTRPFRRFYAVVSNMLPGFLRVCLPVLFFLLLSASYAALAFGRAKQDFEDPTAAGYAIWILMVCADNYETLV-NEPSRHPVYVPFVVMIIVVGSMFLLSLLLGVTYDVFIEHTTEQVKSERLKELKGLNMAFATLDPTVRG 147
            LR R  RRF+ V+  M+PG     +P+LFF+++    +AL F    QD  +P    Y  + L+   DN++ ++ +E   +  Y+ F    I VG  FLLSL++G TY+ +     +Q+K ERLKE++GL  AF++LD    G
Sbjct:   48 LRARKGRRFFEVLKKMMPGMTHSLVPLLFFIVIVMVLSALMFDGTIQDLANPMFTSYNWFFLIFTNDNFDRILPDEVMMNMSYLLFFFPCIYVGQQFLLSLIIGDTYETYKAFVKKQLKKERLKEMQGLTKAFSSLDDQKHG 189          
BLAST of mRNA_F-distichus_contig96096.19065.1 vs. uniprot
Match: A0A482T0I9_9ARCH (Ion transporter n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T0I9_9ARCH)

HSP 1 Score: 87.4 bits (215), Expect = 2.870e-17
Identity = 48/137 (35.04%), Postives = 79/137 (57.66%), Query Frame = 0
Query:    7 LRTRPFRRFYAVVSNMLPGFLRVCLPVLFFLLLSASYAALAFGRAKQDFEDPTAAGYAIWILMVCADNYETLV-NEPSRHPVYVPFVVMIIVVGSMFLLSLLLGVTYDVFIEHTTEQVKSERLKELKGLNMAFATLD 142
            LR R  R+F+ V+  M+PG +   +P++FF+L+    ++L+F    ++F+      Y    L+   DN++ L+      +  Y+ F    I VG  FLLSL++G TY+ F  +  +Q+K E+LKE++GL  AFA LD
Sbjct:    5 LRARRGRKFFEVLKKMVPGMMHSLVPIVFFVLIIMGMSSLSFDNLIEEFKSTAYTSYNWLFLIFTNDNFDRLLPGSIMVNMSYLLFFFPAIYVGQRFLLSLIIGDTYETFRSYVKKQLKKEKLKEMQGLTKAFAALD 141          
BLAST of mRNA_F-distichus_contig96096.19065.1 vs. uniprot
Match: L1J300_GUITC (EF-hand domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J300_GUITC)

HSP 1 Score: 55.5 bits (132), Expect = 4.050e-6
Identity = 47/158 (29.75%), Postives = 73/158 (46.20%), Query Frame = 0
Query:    1 RTAILSLRTRPFRRFYAVVSNMLPGFLRVC-LPVLFFLLLSASYAALAFGR---------AKQDFEDPTAAGYAIWILMVCADNYETLVNEP-SRHPVYVPFVVMIIVVGSMFLLSLLLGVTYDVFIEHTTEQVKSERLKELKGLNMAFATLDPTVRG 147
            R  +L+ R R  RR  +    M    + V  LP+L  L   +      +GR          +  F     A   +++L    DN++ +V E   +HPV   F +  IV  S FL+S+ LGV +D+++E   + VK+E  KE K +  AF  LD   +G
Sbjct:  174 RLTVLAARHRDVRRLISFFPTMCVKLVTVFFLPLLGVLAFFSILCVRIYGRLPAEHSLDLGEDSFSSVMPAIRTLFLLSTI-DNFDPVVTEAYKQHPVSFFFFLAFIVFASFFLMSVALGVMFDLYLEDHEKTVKAEAKKEEKSMAKAFQKLDVEEQG 330          
BLAST of mRNA_F-distichus_contig96096.19065.1 vs. uniprot
Match: A0A7S0F1K7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F1K7_9CRYP)

HSP 1 Score: 52.8 bits (125), Expect = 3.020e-5
Identity = 44/148 (29.73%), Postives = 70/148 (47.30%), Query Frame = 0
Query:    1 RTAILSLRTRPFRRFYAVVSNMLPGFLRVC-LPVLFFLLLSASYAALAFGRAKQDF-----EDPTAA---GYAIWILMVCADNYETLVNEP-SRHPVYVPFVVMIIVVGSMFLLSLLLGVTYDVFIEHTTEQVKSERLKELKGLNMAF 138
            R  +L+ R R  RR  +    M    + V  LP+L  L   +      +GR  Q+      ED  ++         L+   DN++ +V E   +HP+   F +  IV  S FL+S+ LGV +D+++E   + VK+E  KE K +  AF
Sbjct:  195 RLTVLAARHRDVRRLISFFPTMCVKLVTVFFLPLLGVLAFFSILCVRIYGRLPQEHSLDLGEDSFSSVLPAIRTLFLLSTIDNFDPVVTEAYKQHPISFFFFLAFIVFASFFLMSVALGVMFDLYLEDHEKTVKAEAKKEEKSVAKAF 342          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96096.19065.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LF40_ECTSI5.720e-7382.99Putative two-pore calcium channel (Partial) (Fragm... [more]
A0A6H5KF87_9PHAE6.660e-6978.81Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S3M3M3_9STRA5.540e-1936.62Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A482T0I9_9ARCH2.870e-1735.04Ion transporter n=1 Tax=archaeon TaxID=1906665 Rep... [more]
L1J300_GUITC4.050e-629.75EF-hand domain-containing protein n=1 Tax=Guillard... [more]
A0A7S0F1K7_9CRYP3.020e-529.73Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.70coord: 12..121
e-value: 4.5E-5
score: 25.2
NoneNo IPR availablePANTHERPTHR46988FAMILY NOT NAMEDcoord: 2..143
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 29..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 109..147
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..75
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 40..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..108
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..44
NoneNo IPR availableTMHMMTMhelixcoord: 88..110
NoneNo IPR availableTMHMMTMhelixcoord: 25..47
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 8..119
e-value: 9.5E-7
score: 28.3

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.70coord: 12..121
e-value: 4.5E-5
score: 25.2
NoneNo IPR availablePANTHERPTHR46988FAMILY NOT NAMEDcoord: 2..143
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 29..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 109..147
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..75
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 40..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..108
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..44
NoneNo IPR availableTMHMMTMhelixcoord: 88..110
NoneNo IPR availableTMHMMTMhelixcoord: 25..47
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 8..119
e-value: 9.5E-7
score: 28.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig96096contigF-distichus_contig96096:372..1916 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig96096.19065.1mRNA_F-distichus_contig96096.19065.1Fucus distichus monoicousmRNAF-distichus_contig96096 372..1916 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig96096.19065.1 ID=prot_F-distichus_contig96096.19065.1|Name=mRNA_F-distichus_contig96096.19065.1|organism=Fucus distichus monoicous|type=polypeptide|length=147bp
RTAILSLRTRPFRRFYAVVSNMLPGFLRVCLPVLFFLLLSASYAALAFGR
AKQDFEDPTAAGYAIWILMVCADNYETLVNEPSRHPVYVPFVVMIIVVGS
MFLLSLLLGVTYDVFIEHTTEQVKSERLKELKGLNMAFATLDPTVRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom