prot_F-distichus_contig96053.19060.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig96053.19060.1
Unique Nameprot_F-distichus_contig96053.19060.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length99
Homology
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BLAST of mRNA_F-distichus_contig96053.19060.1 vs. uniprot
Match: A0A6H5KC00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC00_9PHAE)

HSP 1 Score: 50.1 bits (118), Expect = 7.280e-5
Identity = 31/76 (40.79%), Postives = 45/76 (59.21%), Query Frame = 0 
Query:    9 IGNGQAAWNALEEKYNSHTREARRTYHEKLHSTKMEAGDDPDDFLYTMDGFHERLEDIGLPVPDERYEDIILQALS 84
            +G+G AAW AL E++++ T+EARR  H +L + +  AG DP DF         RL+ +G  V D  Y DI+L  L+
Sbjct:   89 MGDGTAAWRALNERFDAQTQEARRACHNELFNLRHLAGGDPIDFFTKGWDLKLRLKVLGEEVSDLVYLDIMLSGLT 164
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96053.19060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KC00_9PHAE7.280e-540.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 14..96
e-value: 5.4E-15
score: 55.3

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 14..96
e-value: 5.4E-15
score: 55.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig96053contigF-distichus_contig96053:1010..1306 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig96053.19060.1mRNA_F-distichus_contig96053.19060.1Fucus distichus monoicousmRNAF-distichus_contig96053 1010..1306 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig96053.19060.1 ID=prot_F-distichus_contig96053.19060.1|Name=mRNA_F-distichus_contig96053.19060.1|organism=Fucus distichus monoicous|type=polypeptide|length=99bp
MGKTREDGIGNGQAAWNALEEKYNSHTREARRTYHEKLHSTKMEAGDDPD
DFLYTMDGFHERLEDIGLPVPDERYEDIILQALSAKYERVRTASYERRD
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