prot_F-distichus_contig95038.18960.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig95038.18960.1
Unique Nameprot_F-distichus_contig95038.18960.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length269
Homology
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BLAST of mRNA_F-distichus_contig95038.18960.1 vs. uniprot
Match: D7FIJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ8_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 3.670e-57
Identity = 124/271 (45.76%), Postives = 165/271 (60.89%), Query Frame = 0 
Query:    1 VTHIKRWQYKWLGEITESFMAEKATP-----GQVAEADRPSIPKESEEKGFDEKKEEKAQQGKT-PRKPLGQPRFSLDNKNIYQLRVEKRERKEMFRQRNVLGILPRKEPKPKRPGKRALKRKRLEERRIAERESKIV-YVGKERKREWYSKFLRILWPSEESIRLSNLGWESGMGMPCLTTTVFEGGFRKSGDNFYLNRVMTELKPLLSRWTGAVGMNRDDAMPHLNTYCRYRELKRSDGGFFLRR-GIGRVLVGTRGDEMTLWRGLTRR 263
            + ++ R  YKWLGEITESFMAEK +      G+ A  D      E EE    + ++++  +GK  P+KPLGQ +    +K I + R E+ ER+E   +RNVLGILP K+                         + ++ +VGKERKR W+ KFLR++WP+EE++R SNLGWESG GMPCLTTT++EGG+RK   N+ LNRVM ELKPLL  WTGA GM+R +AMPHLNTY RYREL R+DG   + + G+   L+ +       W  L  R
Sbjct:  503 IMNLSRRPYKWLGEITESFMAEKTSSKDGKNGKKAIRDIDVGLAEEEEMRRKKXEQDERNKGKNQPKKPLGQRKDPWGDKGILEKRKERAERREAIHRRNVLGILPPKKXXXXXXXXXXXXXXXXXXXXXXXXXAALIKWVGKERKRNWFMKFLRVVWPTEEAVRTSNLGWESGAGMPCLTTTLYEGGYRKCETNYQLNRVMEELKPLLCTWTGAKGMDRGNAMPHLNTYYRYRELPRTDGSLKMSKDGLAYFLLASHSLHRIAWGYLEHR 773
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig95038.18960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIJ8_ECTSI3.670e-5745.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010347Tyrosyl-DNA phosphodiesterase IPFAMPF06087Tyr-DNA_phosphocoord: 139..228
e-value: 3.2E-5
score: 23.0
IPR027415Tyrosyl-DNA phosphodiesterase, C-terminalGENE3D3.30.870.20coord: 113..238
e-value: 4.6E-9
score: 38.1
NoneNo IPR availableSUPERFAMILY56024Phospholipase D/nucleasecoord: 145..228

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010347Tyrosyl-DNA phosphodiesterase IPFAMPF06087Tyr-DNA_phosphocoord: 139..228
e-value: 3.2E-5
score: 23.0
IPR027415Tyrosyl-DNA phosphodiesterase, C-terminalGENE3D3.30.870.20coord: 113..238
e-value: 4.6E-9
score: 38.1
NoneNo IPR availableSUPERFAMILY56024Phospholipase D/nucleasecoord: 145..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig95038contigF-distichus_contig95038:54..1894 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig95038.18960.1mRNA_F-distichus_contig95038.18960.1Fucus distichus monoicousmRNAF-distichus_contig95038 54..1894 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig95038.18960.1 ID=prot_F-distichus_contig95038.18960.1|Name=mRNA_F-distichus_contig95038.18960.1|organism=Fucus distichus monoicous|type=polypeptide|length=269bp
VTHIKRWQYKWLGEITESFMAEKATPGQVAEADRPSIPKESEEKGFDEKK
EEKAQQGKTPRKPLGQPRFSLDNKNIYQLRVEKRERKEMFRQRNVLGILP
RKEPKPKRPGKRALKRKRLEERRIAERESKIVYVGKERKREWYSKFLRIL
WPSEESIRLSNLGWESGMGMPCLTTTVFEGGFRKSGDNFYLNRVMTELKP
LLSRWTGAVGMNRDDAMPHLNTYCRYRELKRSDGGFFLRRGIGRVLVGTR
GDEMTLWRGLTRRRRRPDR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010347Tdp1
IPR027415TDP_C