prot_F-distichus_contig95037.18959.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig95037.18959.1
Unique Nameprot_F-distichus_contig95037.18959.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length92
Homology
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BLAST of mRNA_F-distichus_contig95037.18959.1 vs. uniprot
Match: D7G2R5_ECTSI (DUF2040 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R5_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 9.960e-30
Identity = 62/84 (73.81%), Postives = 71/84 (84.52%), Query Frame = 0 
Query:    7 GKAKPIGSKPPPRRRPAGSTAVFDVDSD-EDRGPQEDPRGVAAVNKRLSAISAKQERQAKKNFEDALQADPSVFDYDSVYDGMK 89
            G+ +PIGSKP PRRRPAGST+VFD +SD E+   + D  GV AVNKRL+AISAKQE+QAKK +EDALQADPSVFDYD VYDGMK
Sbjct:   29 GRGRPIGSKPAPRRRPAGSTSVFDANSDDEEEDSKGDLSGVTAVNKRLAAISAKQEKQAKKEYEDALQADPSVFDYDRVYDGMK 112
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BLAST of mRNA_F-distichus_contig95037.18959.1 vs. uniprot
Match: A0A835YZI8_9STRA (Coiled-coil domain-containing protein 55-domain containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZI8_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.530e-8
Identity = 37/72 (51.39%), Postives = 45/72 (62.50%), Query Frame = 0 
Query:   18 PRRRPAGSTAV--FDVDSDEDRGP-QEDPRGVAAVNKRLSAISAKQERQAKKNFEDALQADPSVFDYDSVYD 86
            PR+ PA   AV  F  DSD D G   EDP   AAVN+RL+A  A++ R+ +K    A+  DPSVFDYD VYD
Sbjct:   26 PRKAPARGPAVAAFGDDSDSDGGAGAEDPTSRAAVNRRLAAEQAERARRMEKVAVQAVMDDPSVFDYDGVYD 97
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BLAST of mRNA_F-distichus_contig95037.18959.1 vs. uniprot
Match: W7TFP5_9STRA (DUF2040 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFP5_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.100e-5
Identity = 32/81 (39.51%), Postives = 46/81 (56.79%), Query Frame = 0 
Query:    7 GKAKPIGSKPPPRRRPAGSTAVFDVDSDEDRGPQEDP-RGVAAVNKRLSAISAKQERQAKKNFEDALQADPSVFDYDSVYD 86
            G+ +P  + P   RRPAGS    D D  +D G +ED     A+ NK L A S K ++  ++    A  +DPS++DYD+VYD
Sbjct:   26 GRPRPASAAP---RRPAGSAFSLDDDDSDDNGQEEDGLASKASFNKMLQAQSIKAQKSLEEAEAAARASDPSIYDYDAVYD 103
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BLAST of mRNA_F-distichus_contig95037.18959.1 vs. uniprot
Match: A0A1Y1YCI8_9FUNG (DUF2040 domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YCI8_9FUNG)

HSP 1 Score: 49.7 bits (117), Expect = 7.130e-5
Identity = 26/64 (40.62%), Postives = 39/64 (60.94%), Query Frame = 0 
Query:   26 TAVFDVDSDEDRGPQEDPRGVAAVNKRLSAISAKQERQAKKNFEDALQADPSVFDYDSVYDGMK 89
            T++F+ D D++  P      V+  NK L+   + + ++ KK  E+AL+ D SVFDYD VYD MK
Sbjct:   29 TSIFNNDEDDEEVPAS---SVSVTNKELARNFSFESKKTKKQQEEALEIDSSVFDYDGVYDEMK 89
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig95037.18959.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G2R5_ECTSI9.960e-3073.81DUF2040 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835YZI8_9STRA3.530e-851.39Coiled-coil domain-containing protein 55-domain co... [more]
W7TFP5_9STRA1.100e-539.51DUF2040 domain-containing protein n=2 Tax=Monodops... [more]
A0A1Y1YCI8_9FUNG7.130e-540.63DUF2040 domain-containing protein n=1 Tax=Basidiob... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018612Domain of unknown function DUF2040PFAMPF09745DUF2040coord: 65..90
e-value: 2.0E-6
score: 27.9

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018612Domain of unknown function DUF2040PFAMPF09745DUF2040coord: 65..90
e-value: 2.0E-6
score: 27.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig95037contigF-distichus_contig95037:1764..2039 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig95037.18959.1mRNA_F-distichus_contig95037.18959.1Fucus distichus monoicousmRNAF-distichus_contig95037 1764..2039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig95037.18959.1 ID=prot_F-distichus_contig95037.18959.1|Name=mRNA_F-distichus_contig95037.18959.1|organism=Fucus distichus monoicous|type=polypeptide|length=92bp
SLKNEGGKAKPIGSKPPPRRRPAGSTAVFDVDSDEDRGPQEDPRGVAAVN
KRLSAISAKQERQAKKNFEDALQADPSVFDYDSVYDGMKNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018612DUF2040