prot_F-distichus_contig94965.18949.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig94965.18949.1
Unique Nameprot_F-distichus_contig94965.18949.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length84
Homology
BLAST of mRNA_F-distichus_contig94965.18949.1 vs. uniprot
Match: D8LPR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR0_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 1.490e-21
Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 0
Query:    1 GGEAVFIPKKPDDDVLGGIGEEDDGFLVTFRRADTRNMSELRVWNAKTLDAKPVARVKLPTRVPLGFHALFVSEAELSVQ 80
            GGE +F+P  PD     G+G+EDDGFLVTF        SELRVW+AKT+   PVA VKLP RVPLGFHA+ ++EA+L+ Q
Sbjct:  449 GGEGLFVPSNPD-----GVGDEDDGFLVTFVSPKDGGNSELRVWDAKTMSPDPVASVKLPARVPLGFHAIHITEADLATQ 523          
BLAST of mRNA_F-distichus_contig94965.18949.1 vs. uniprot
Match: D8LGA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGA3_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 3.930e-21
Identity = 50/84 (59.52%), Postives = 61/84 (72.62%), Query Frame = 0
Query:    1 GGEAVFIPKKPDDDVLGG--IGEEDDGFLVTF-RRADTRNMSELRVWNAKTLDAKPVARVKLPTRVPLGFHALFVSEAELSVQK 81
            GGE +FIP KPDD    G   G EDDG+L TF  R D    SELRV++AKT++++PVA VKLP RVP GFHA+FV EAEL+ Q+
Sbjct:  458 GGECIFIPSKPDDGDGDGELAGGEDDGYLATFVSRKDGTGTSELRVFDAKTMNSEPVAAVKLPARVPAGFHAIFVPEAELATQR 541          
BLAST of mRNA_F-distichus_contig94965.18949.1 vs. uniprot
Match: D8LGA2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGA2_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 4.890e-20
Identity = 52/91 (57.14%), Postives = 63/91 (69.23%), Query Frame = 0
Query:    1 GGEAVFIPKKPDD--------DVLGGI-GEEDDGFLVTF-RRADTRNMSELRVWNAKTLDAKPVARVKLPTRVPLGFHALFVSEAELSVQK 81
            GGE +FIP KPDD        D  G + G EDDG+L TF  R D    SELRV+NAKT+ ++PVA VKLP RVP GFHA+FVSEA+L+ Q+
Sbjct:  457 GGECIFIPSKPDDHAGHDGDSDSDGELEGGEDDGYLATFVSRKDGTGNSELRVFNAKTMSSEPVAIVKLPARVPAGFHAIFVSEADLAKQQ 547          
BLAST of mRNA_F-distichus_contig94965.18949.1 vs. uniprot
Match: A0A139AG79_GONPJ (Carotenoid oxygenase n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AG79_GONPJ)

HSP 1 Score: 85.9 bits (211), Expect = 1.010e-17
Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    1 GGEAVFIPKKPDDDVLGGIGE-EDDGFLVTFRRADTRNMSELRVWNAKTLDAKPVARVKLPTRVPLGFHALFVSEAELSVQK 81
            GGEAVF+P+K     L G  E EDDGFLV F R +    SEL V++AK++DAKPVAR+ LP RVP GFH L+V++ ++  Q+
Sbjct:  447 GGEAVFVPRKTS---LSGTEEVEDDGFLVVFVRNEEAETSELHVYDAKSMDAKPVARITLPHRVPFGFHGLWVTQEQIEKQR 525          
BLAST of mRNA_F-distichus_contig94965.18949.1 vs. uniprot
Match: A0A804II93_MUSAM ((wild Malaysian banana) hypothetical protein n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804II93_MUSAM)

HSP 1 Score: 80.1 bits (196), Expect = 1.080e-15
Identity = 42/80 (52.50%), Postives = 52/80 (65.00%), Query Frame = 0
Query:    1 GGEAVFIPKKPDDDVLGGIGEEDDGFLVTFRRADTRNMSELRVWNAKTLDAKPVARVKLPTRVPLGFHALFVSEAELSVQ 80
            G EAVF+P KP     G   EEDDG+L+ F   +    SE+ V +AKT+ A PVA V+LPTRVP GFHA FV+E +L  Q
Sbjct:  470 GSEAVFVPHKP-----GFSSEEDDGYLIFFVHDENTGKSEVNVIDAKTMSADPVAVVELPTRVPYGFHAFFVTEEQLQRQ 544          
BLAST of mRNA_F-distichus_contig94965.18949.1 vs. uniprot
Match: A0A1D1ZCR7_9ARAE (Carotenoid 9,10(9',10')-cleavage dioxygenase n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZCR7_9ARAE)

HSP 1 Score: 80.1 bits (196), Expect = 1.080e-15
Identity = 41/80 (51.25%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    1 GGEAVFIPKKPDDDVLGGIGEEDDGFLVTFRRADTRNMSELRVWNAKTLDAKPVARVKLPTRVPLGFHALFVSEAELSVQ 80
            G EAVF+P+KP     G   +EDDG+L+ F   D    SE+ V +AKT+ A PVA V+LP+RVP GFHA FV+E +L  Q
Sbjct:  479 GSEAVFVPRKP-----GVCSDEDDGYLIFFVHDDNTGKSEVNVIDAKTMSADPVAVVELPSRVPHGFHAFFVTEEQLKQQ 553          
BLAST of mRNA_F-distichus_contig94965.18949.1 vs. uniprot
Match: A0A0N7CLN0_9ASPA (Carotenoid cleavage dioxygenase n=3 Tax=Crocus TaxID=58949 RepID=A0A0N7CLN0_9ASPA)

HSP 1 Score: 79.7 bits (195), Expect = 1.490e-15
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 0
Query:    1 GGEAVFIPKKPDDDVLGGIGEEDDGFLVTFRRADTRNMSELRVWNAKTLDAKPVARVKLPTRVPLGFHALFVSEAELSVQKLE 83
            G EA+F+P +P     G   +EDDG+L+ F   +    SE+ V NAKT+ A+PVA V+LP+RVP GFHALF++E EL   + E
Sbjct:  513 GSEAIFVPCQP-----GITSDEDDGYLIFFVHDENNGKSEVNVINAKTMSAEPVAVVELPSRVPYGFHALFLNEEELQKHQAE 590          
BLAST of mRNA_F-distichus_contig94965.18949.1 vs. uniprot
Match: A0A7C9EI78_OPUST (9-cis-epoxycarotenoid dioxygenase n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9EI78_OPUST)

HSP 1 Score: 75.9 bits (185), Expect = 1.950e-15
Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 0
Query:    1 GGEAVFIPKKPDDDVLGGIGEEDDGFLVTFRRADTRNMSELRVWNAKTLDAKPVARVKLPTRVPLGFHALFVSEAELSVQ 80
            G EA+F+P++PD        EEDDGFL+ F   +    S + V +AKT+ A PVA V+LP+RVP GFHA FV+E +L  Q
Sbjct:   89 GSEAIFVPREPDTAT-----EEDDGFLIFFVHDENIGKSFVNVIDAKTMSADPVAVVELPSRVPYGFHAFFVTEEQLKDQ 163          
BLAST of mRNA_F-distichus_contig94965.18949.1 vs. uniprot
Match: A0A0C9QLD5_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_28436_2071 transcribed RNA sequence n=1 Tax=Wollemia nobilis TaxID=56998 RepID=A0A0C9QLD5_9SPER)

HSP 1 Score: 79.3 bits (194), Expect = 2.010e-15
Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    1 GGEAVFIPKKPDDDVLGGIGEEDDGFLVTFRRADTRNMSELRVWNAKTLDAKPVARVKLPTRVPLGFHALFVSEAELSVQ 80
            G EA+F+P+  D ++     EEDDG+L+ F   +    SE+ V++AKT+  +PVA V LPTRVP GFHA FVSE +L  Q
Sbjct:  462 GSEAIFVPRDSDSNL-----EEDDGYLICFVHDENTRKSEVNVFDAKTMSPEPVAIVHLPTRVPYGFHAFFVSEEQLQNQ 536          
BLAST of mRNA_F-distichus_contig94965.18949.1 vs. uniprot
Match: A0A8J9WKN2_9CHLO (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WKN2_9CHLO)

HSP 1 Score: 79.0 bits (193), Expect = 2.720e-15
Identity = 39/80 (48.75%), Postives = 51/80 (63.75%), Query Frame = 0
Query:    1 GGEAVFIPKKPDDDVLGGIGEEDDGFLVTFRRADTRNMSELRVWNAKTLDAKPVARVKLPTRVPLGFHALFVSEAELSVQ 80
            GGEAVF+P  PD   L G   EDDG+L T+   + +N SE  V++A +  A+PVARVKLP RVP GFH   ++ A+   Q
Sbjct:  425 GGEAVFVPSSPDPSALKG---EDDGYLATYVYDEAKNSSEFVVYDACSFSAEPVARVKLPQRVPFGFHGKHINVAQFQAQ 501          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig94965.18949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPR0_ECTSI1.490e-2157.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LGA3_ECTSI3.930e-2159.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LGA2_ECTSI4.890e-2057.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A139AG79_GONPJ1.010e-1753.66Carotenoid oxygenase n=1 Tax=Gonapodya prolifera (... [more]
A0A804II93_MUSAM1.080e-1552.50(wild Malaysian banana) hypothetical protein n=1 T... [more]
A0A1D1ZCR7_9ARAE1.080e-1551.25Carotenoid 9,10(9',10')-cleavage dioxygenase n=1 T... [more]
A0A0N7CLN0_9ASPA1.490e-1548.19Carotenoid cleavage dioxygenase n=3 Tax=Crocus Tax... [more]
A0A7C9EI78_OPUST1.950e-1548.759-cis-epoxycarotenoid dioxygenase n=1 Tax=Opuntia ... [more]
A0A0C9QLD5_9SPER2.010e-1548.75TSA: Wollemia nobilis Ref_Wollemi_Transcript_28436... [more]
A0A8J9WKN2_9CHLO2.720e-1548.75Carotenoid 9,10(9',10')-cleavage dioxygenase 1 n=1... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004294Carotenoid oxygenasePFAMPF03055RPE65coord: 2..73
e-value: 5.9E-15
score: 55.4
IPR004294Carotenoid oxygenasePANTHERPTHR10543BETA-CAROTENE DIOXYGENASEcoord: 1..77
NoneNo IPR availablePANTHERPTHR10543:SF89CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1coord: 1..77

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004294Carotenoid oxygenasePFAMPF03055RPE65coord: 2..73
e-value: 5.9E-15
score: 55.4
IPR004294Carotenoid oxygenasePANTHERPTHR10543BETA-CAROTENE DIOXYGENASEcoord: 1..77
NoneNo IPR availablePANTHERPTHR10543:SF89CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1coord: 1..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig94965contigF-distichus_contig94965:156..738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig94965.18949.1mRNA_F-distichus_contig94965.18949.1Fucus distichus monoicousmRNAF-distichus_contig94965 156..738 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig94965.18949.1 ID=prot_F-distichus_contig94965.18949.1|Name=mRNA_F-distichus_contig94965.18949.1|organism=Fucus distichus monoicous|type=polypeptide|length=84bp
GGEAVFIPKKPDDDVLGGIGEEDDGFLVTFRRADTRNMSELRVWNAKTLD
AKPVARVKLPTRVPLGFHALFVSEAELSVQKLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004294Carotenoid_Oase