prot_F-distichus_contig107875.674.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig107875.674.1
Unique Nameprot_F-distichus_contig107875.674.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length106
Homology
BLAST of mRNA_F-distichus_contig107875.674.1 vs. uniprot
Match: D7FK14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK14_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 6.360e-44
Identity = 77/102 (75.49%), Postives = 85/102 (83.33%), Query Frame = 0
Query:    1 SRYSKGRVDVEHLGPRTKIVWNKAQPPLTSKLHDFCTLMHVEPLAD--GSFMLVTRATEHPQARATAEAPLLDGHVRSEILLGVTILRPVDDGCASRTEMTT 100
            +RYSKGR D+EHLGP TKIVWNKAQPPL+ KLHDFCTLMH++PL D  GSFML+TRATEHP+A      PLLDGHVRSEILLGVTILRP   G  +RTEMTT
Sbjct:  114 NRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKA------PLLDGHVRSEILLGVTILRPAK-GDPTRTEMTT 208          
BLAST of mRNA_F-distichus_contig107875.674.1 vs. uniprot
Match: A0A835Z8H4_9STRA (START domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H4_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.150e-27
Identity = 54/96 (56.25%), Postives = 67/96 (69.79%), Query Frame = 0
Query:    1 SRYSKGRVDVEHLGPRTKIVWNKAQPPLTSKLHDFCTLMHVEPLADGSFMLVTRATEHPQARATAEAPLLDGHVRSEILLGVTILRPVDDGCASRT 96
            +RYS+GR DV  LGP TKIVWN+ QPPLT K+HDFCTLMHV+    G   + TRAT+H +A      P L G VRSEI+LGVT++ P+  G A+ T
Sbjct:   77 NRYSRGRDDVARLGPHTKIVWNRTQPPLTGKVHDFCTLMHVDRRDGGGATVTTRATDHERA------PRLRGAVRSEIVLGVTVVEPLAPGRATVT 166          
BLAST of mRNA_F-distichus_contig107875.674.1 vs. uniprot
Match: A0A4D9DEU8_9STRA (START domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEU8_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.280e-20
Identity = 50/106 (47.17%), Postives = 66/106 (62.26%), Query Frame = 0
Query:    1 SRYSKGRVDVEHLGPRTKIVWNKAQPPLTSKLHDFCTLMHVEPLADGSFMLVTRATEHPQARATAEAPLLDGHVRSEILLGVTILRP--VDDGCASRTEMTTVRGA 104
            ++YSKGR DV  +GP TKIVWN+  PPL  K H+FCT+MHV    DGS +++T+ T+HP      E P      RSEI+LGVT +RP   D   A  T ++ V+ A
Sbjct:  281 NKYSKGRDDVARVGPHTKIVWNRTLPPLQKKAHEFCTIMHVVRRPDGSQVMLTKFTDHP------EVPRSSRFARSEIILGVTEVRPHPTDPNRAHLTTISHVKSA 380          
BLAST of mRNA_F-distichus_contig107875.674.1 vs. uniprot
Match: A0A6U6KS53_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6KS53_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 8.100e-7
Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 0
Query:    9 DVEHLGPR----TKIVWNKAQPPLTSKLHDFCTLMHVEPLADGS-FMLVTRATEHPQARATAEAPLLDGHV-RSEILLGVTILRPV--DDGCASRTEMTTVR 102
            D+E+ GP     TK+V + ++PPL  K  +F TLMHV  L DG+ +++V+RA    +     EA   DG V RSEIL+GV I+R V  DD  A    +  +R
Sbjct:  345 DLENDGPFGQSITKVVRSASKPPLVRKSLEFVTLMHVRKLEDGNGYLIVSRAVTQAE-----EAINSDGKVMRSEILMGVNIIRNVEGDDNRAIMINVNHIR 441          
BLAST of mRNA_F-distichus_contig107875.674.1 vs. uniprot
Match: B7G311_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G311_PHATC)

HSP 1 Score: 53.5 bits (127), Expect = 5.140e-6
Identity = 35/89 (39.33%), Postives = 49/89 (55.06%), Query Frame = 0
Query:   17 TKIVWNKAQPPLTSKLHDFCTLMHVEPLADGSFMLVTRATE----HPQARATAEAPLLDGHVRSEILLGVTILRPVDDGCASRTEMTTV 101
            +KIV N+ QPPL SK+    TL+H + L DG++MLV+RA      H  +   A         +S+ILLGV +L P  D  +  T +T V
Sbjct:  295 SKIVRNRTQPPLGSKVMVATTLLHAQQLDDGAWMLVSRAVGGDVYHDSSDKNAS--------KSDILLGVNLLEPYSDHSSVLTAVTHV 375          
BLAST of mRNA_F-distichus_contig107875.674.1 vs. uniprot
Match: A0A7S2K4D5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K4D5_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 5.410e-6
Identity = 42/123 (34.15%), Postives = 61/123 (49.59%), Query Frame = 0
Query:    1 SRYSKGRVDV-----------EHLGPRTKIVWNKAQPPLTSKLHDFCTLMHVEPL----ADGS-FMLVTRATEHPQARATAEAPLLDGHV------RSEILLGVTILRPVDDGCASRTEMTTV 101
            ++ S GR DV           E      K+V N  +PPLT +  +F TLMH   L     +G  +++V+RA      R  AE P     V      RSEILLGV +LR ++ G  ++T++T+V
Sbjct:  103 NKMSLGRTDVKVFQAGVDAVGEFGDGEAKVVQNLTKPPLTKRTLEFVTLMHARKLNPDHGEGEGYLVVSRAVNDRLERDAAENPTTASDVTTMERLRSEILLGVNVLRAIE-GEPNKTDLTSV 224          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig107875.674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FK14_ECTSI6.360e-4475.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z8H4_9STRA2.150e-2756.25START domain-containing protein (Fragment) n=1 Tax... [more]
A0A4D9DEU8_9STRA1.280e-2047.17START domain-containing protein n=2 Tax=Monodopsid... [more]
A0A6U6KS53_9STRA8.100e-741.18Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
B7G311_PHATC5.140e-639.33Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2K4D5_9STRA5.410e-634.15Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 2..102
e-value: 1.9E-11
score: 46.1
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 10..99

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 2..102
e-value: 1.9E-11
score: 46.1
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 10..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig107875contigF-distichus_contig107875:423..1160 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig107875.674.1mRNA_F-distichus_contig107875.674.1Fucus distichus monoicousmRNAF-distichus_contig107875 423..1160 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig107875.674.1 ID=prot_F-distichus_contig107875.674.1|Name=mRNA_F-distichus_contig107875.674.1|organism=Fucus distichus monoicous|type=polypeptide|length=106bp
SRYSKGRVDVEHLGPRTKIVWNKAQPPLTSKLHDFCTLMHVEPLADGSFM
LVTRATEHPQARATAEAPLLDGHVRSEILLGVTILRPVDDGCASRTEMTT
VRGAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf