prot_F-distichus_contig107843.670.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig107843.670.1
Unique Nameprot_F-distichus_contig107843.670.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length64
Homology
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BLAST of mRNA_F-distichus_contig107843.670.1 vs. uniprot
Match: A0A6H5K843_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K843_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 8.280e-23
Identity = 49/64 (76.56%), Postives = 54/64 (84.38%), Query Frame = 0 
Query:    1 MLLNTSLSAKLQSPGNRIDLKDRRMARGAGAPRPNPAPCLNPSENLDMIVEQTLEELGMHTLRV 64
            +L+N SLSAKLQSP  R+DL+DRR ARGA   RPNPAP L+PSENLDMIVE TLEELG HTLRV
Sbjct:   88 VLVNASLSAKLQSPTGRVDLEDRRTARGASVSRPNPAPLLSPSENLDMIVEHTLEELGTHTLRV 151
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BLAST of mRNA_F-distichus_contig107843.670.1 vs. uniprot
Match: D8LQ16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ16_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 1.370e-22
Identity = 49/64 (76.56%), Postives = 54/64 (84.38%), Query Frame = 0 
Query:    1 MLLNTSLSAKLQSPGNRIDLKDRRMARGAGAPRPNPAPCLNPSENLDMIVEQTLEELGMHTLRV 64
            +L+N SLSAKLQSP  R+DL+DRR ARGA   RPNPAP L+PSENLDMIVE TLEELG HTLRV
Sbjct:   88 VLVNASLSAKLQSPTGRVDLEDRRTARGASVSRPNPAPLLSPSENLDMIVEHTLEELGTHTLRV 151
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig107843.670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K843_9PHAE8.280e-2376.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ16_ECTSI1.370e-2276.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010378Trafficking protein particle complex subunit 13PFAMPF06159DUF974coord: 4..64
e-value: 3.1E-6
score: 27.2

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010378Trafficking protein particle complex subunit 13PFAMPF06159DUF974coord: 4..64
e-value: 3.1E-6
score: 27.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig107843contigF-distichus_contig107843:927..1118 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig107843.670.1mRNA_F-distichus_contig107843.670.1Fucus distichus monoicousmRNAF-distichus_contig107843 927..1118 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig107843.670.1 ID=prot_F-distichus_contig107843.670.1|Name=mRNA_F-distichus_contig107843.670.1|organism=Fucus distichus monoicous|type=polypeptide|length=64bp
MLLNTSLSAKLQSPGNRIDLKDRRMARGAGAPRPNPAPCLNPSENLDMIV
EQTLEELGMHTLRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010378TRAPPC13