prot_F-distichus_contig106765.577.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig106765.577.1
Unique Nameprot_F-distichus_contig106765.577.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length59
Homology
BLAST of mRNA_F-distichus_contig106765.577.1 vs. uniprot
Match: D8LEU3_ECTSI (Trafficking protein particle complex subunit 2-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEU3_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 3.710e-26
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 ELAKKRPSGVADASTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLKKV 59
            ++ +K  SG AD STDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRE +LK+V
Sbjct:   50 KVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRV 108          
BLAST of mRNA_F-distichus_contig106765.577.1 vs. uniprot
Match: K8YQL7_NANGC (Trafficking protein particle complex subunit 2-like protein (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YQL7_NANGC)

HSP 1 Score: 70.9 bits (172), Expect = 2.200e-14
Identity = 34/54 (62.96%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    7 PSGVADAST-DMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLKKV 59
            PS  + AST DMFLG+LCPI+E+RVYGY TST++K LA+L + N +RE+DLK V
Sbjct:   63 PSFPSPASTNDMFLGYLCPIEEFRVYGYKTSTQIKFLAILTENNPVRENDLKSV 116          
BLAST of mRNA_F-distichus_contig106765.577.1 vs. uniprot
Match: W7T3S0_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T3S0_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.090e-13
Identity = 34/54 (62.96%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    7 PSGVADAST-DMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLKKV 59
            PS  + AST DMFLG+LCPI+E+RVYGY TST++K LA+L + N +RE+DLK V
Sbjct:   58 PSFPSPASTNDMFLGYLCPIEEFRVYGYKTSTQIKFLAILTENNPVRENDLKSV 111          
BLAST of mRNA_F-distichus_contig106765.577.1 vs. uniprot
Match: A0A836CHF0_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHF0_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.310e-12
Identity = 29/44 (65.91%), Postives = 38/44 (86.36%), Query Frame = 0
Query:   13 ASTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDL 56
            A+ DMFLGHLCP+DEY VYGY+TST++K+LAVLE+    R+S+L
Sbjct:   66 ATRDMFLGHLCPMDEYEVYGYVTSTQVKILAVLEETVTSRKSEL 109          
BLAST of mRNA_F-distichus_contig106765.577.1 vs. uniprot
Match: A0A0G4ISZ6_PLABS (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4ISZ6_PLABS)

HSP 1 Score: 60.5 bits (145), Expect = 5.950e-10
Identity = 27/49 (55.10%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    9 GVADASTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLK 57
            GV+ A  D +LG+LCPIDEY+VYGYMT + +K + V++DV  +R+SD+K
Sbjct:   56 GVSPAPFDKYLGYLCPIDEYKVYGYMTVSDIKFIVVVQDVF-VRDSDMK 103          
BLAST of mRNA_F-distichus_contig106765.577.1 vs. uniprot
Match: K3WRF7_GLOUD (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRF7_GLOUD)

HSP 1 Score: 59.3 bits (142), Expect = 1.190e-9
Identity = 26/54 (48.15%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    4 KKRPSGVADASTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLK 57
            K R +G+  A  DM+LG L PI++YRVYGY+T+T +K +A+++D + +RES+L+
Sbjct:   42 KLRSAGIMAAKDDMYLGFLGPIEDYRVYGYVTNTSIKFVAIMQD-SPVRESELR 94          
BLAST of mRNA_F-distichus_contig106765.577.1 vs. uniprot
Match: A0A662X0I1_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X0I1_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.530e-9
Identity = 28/56 (50.00%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    4 KKRPSGVADASTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLKKV 59
            K R +G+  +  DM+LG L PI++YRVYGY+T+T +K +AVL D   +RES+L+ V
Sbjct:   72 KLRSAGITSSKEDMYLGFLGPIEDYRVYGYVTNTSVKFVAVLHDT-PVRESELRPV 126          
BLAST of mRNA_F-distichus_contig106765.577.1 vs. uniprot
Match: A0A7S3JXJ4_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JXJ4_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.690e-9
Identity = 25/43 (58.14%), Postives = 35/43 (81.40%), Query Frame = 0
Query:   16 DMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLKK 58
            D +LG LCPIDEY+V+GYMTST +K + +L D N ++ESDL++
Sbjct:   81 DRYLGFLCPIDEYQVFGYMTSTHIKFMVILFDENLVQESDLRE 123          
BLAST of mRNA_F-distichus_contig106765.577.1 vs. uniprot
Match: TPC2L_DICDI (Trafficking protein particle complex subunit 2-like protein n=2 Tax=Dictyosteliaceae TaxID=2058185 RepID=TPC2L_DICDI)

HSP 1 Score: 57.8 bits (138), Expect = 4.700e-9
Identity = 23/57 (40.35%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    1 ELAKKRPSGVADASTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLK 57
            ++ + +P       +DM+LG L P ++Y+VYGY+T+T++K + V+ D +DI++SDLK
Sbjct:   43 DIIEDKPGSNKKLPSDMYLGLLYPTEDYKVYGYLTNTKIKFIIVVLDTSDIKDSDLK 99          
BLAST of mRNA_F-distichus_contig106765.577.1 vs. uniprot
Match: D0N1W2_PHYIT (Trafficking protein particle complex subunit 2-like protein n=6 Tax=Peronosporaceae TaxID=4777 RepID=D0N1W2_PHYIT)

HSP 1 Score: 57.8 bits (138), Expect = 4.700e-9
Identity = 26/54 (48.15%), Postives = 40/54 (74.07%), Query Frame = 0
Query:    4 KKRPSGVADASTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLK 57
            K R +G+  +  DM+LG L PI++YRVYGY+T+T +K + VL+D   +RES+L+
Sbjct:   43 KLRGAGITSSKDDMYLGFLGPIEDYRVYGYVTNTSVKFVVVLQDA-PVRESELR 95          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig106765.577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEU3_ECTSI3.710e-2681.36Trafficking protein particle complex subunit 2-lik... [more]
K8YQL7_NANGC2.200e-1462.96Trafficking protein particle complex subunit 2-lik... [more]
W7T3S0_9STRA1.090e-1362.96Trafficking protein particle complex subunit 2-lik... [more]
A0A836CHF0_9STRA3.310e-1265.91Trafficking protein particle complex subunit 2-lik... [more]
A0A0G4ISZ6_PLABS5.950e-1055.10Trafficking protein particle complex subunit 2-lik... [more]
K3WRF7_GLOUD1.190e-948.15Trafficking protein particle complex subunit 2-lik... [more]
A0A662X0I1_9STRA1.530e-950.00Trafficking protein particle complex subunit 2-lik... [more]
A0A7S3JXJ4_9STRA1.690e-958.14Trafficking protein particle complex subunit 2-lik... [more]
TPC2L_DICDI4.700e-940.35Trafficking protein particle complex subunit 2-lik... [more]
D0N1W2_PHYIT4.700e-948.15Trafficking protein particle complex subunit 2-lik... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.70coord: 3..59
e-value: 2.2E-10
score: 41.9
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 14..51

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.70coord: 3..59
e-value: 2.2E-10
score: 41.9
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 14..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig106765contigF-distichus_contig106765:1680..1856 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig106765.577.1mRNA_F-distichus_contig106765.577.1Fucus distichus monoicousmRNAF-distichus_contig106765 1680..1856 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig106765.577.1 ID=prot_F-distichus_contig106765.577.1|Name=mRNA_F-distichus_contig106765.577.1|organism=Fucus distichus monoicous|type=polypeptide|length=59bp
ELAKKRPSGVADASTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVND
IRESDLKKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011012Longin-like_dom_sf