prot_F-distichus_contig106581.558.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig106581.558.1
Unique Nameprot_F-distichus_contig106581.558.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length302
Homology
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BLAST of mRNA_F-distichus_contig106581.558.1 vs. uniprot
Match: D8LL70_ECTSI (DUF4524 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL70_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 2.290e-49
Identity = 156/374 (41.71%), Postives = 183/374 (48.93%), Query Frame = 0 
Query:    1 LTDFCRRDLLPQLAAVANFRNAHSSRPYLSRRLHVD-----KSFQGTS-----------TPPPSRRLSRLALWPE------RPPSSGNSKRCTVH-ADGRVVVRAAGGNARLVLSSSRNVCEVDFAAQVPGGRRGAHAGRVWVNRQFLVV-RAAPP----PAEFAHALGVALRAFPAR--------------------GGEEDGGNRPAAV---------GDEDEVVASKLPVPLGRPDRARWDTVQTSPTFGSSTGAWPSAFDHHRPLG-----EWTD----------VTYSSAASSGGGPANVTPEQRLLAADAMKLAKGTGFAGPLAAVVESFAGCIYRVVDDGGGFGAGSISGERGAGRGEQGVTVHVRA 302
            L+DFCRRDL+P +AAV++FRNAHS RPYLS+R+H        S  GT            TP      SR+A WP       R  +S +S    V  ADG V VRAAGGNARL LS+S  V EVD+A  +P G   A  GRVWV R+FLV   AAPP    P EF+HAL VA+R   +                     G    G   PAA          G E  +VA +LP P  RPD A WDTVQ  P+  S         D   PLG      W D           T S++A++ GG        RLL+ D MKLA G G+AG LAAVVES   C YR+V  GGG         RGAG G  GV V V A
Sbjct:   61 LSDFCRRDLIPHVAAVSSFRNAHSPRPYLSQRIHATLEQETHSSNGTXXXXXXXXXXXXTP------SRIAHWPAAAEPTCRHSTSNSSSTFVVRGADGSVEVRAAGGNARLALSASGTVAEVDYAVALPPGPGAAGGGRVWVTRRFLVGGSAAPPFDDVPPEFSHALSVAVRESRSAXXXXXXXXXXXXXXXXXXXXGDVSLGRVSPAAAAAGGTVSGKGGERGLVAVELPRPEERPDHASWDTVQQGPSLDSHR-------DPLAPLGYYGDRRWCDGAAPTFATRAATASASAAAAGG--------RLLSVDVMKLAGGQGYAGELAAVVESTGCCTYRIVVGGGGH-------HRGAGEGGVGVHVVVHA 406
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BLAST of mRNA_F-distichus_contig106581.558.1 vs. uniprot
Match: A0A6H5KVD6_9PHAE (DUF4524 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD6_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 2.500e-15
Identity = 56/126 (44.44%), Postives = 71/126 (56.35%), Query Frame = 0 
Query:    1 LTDFCRRDLLPQLAAVANFRNAHSSRPYLSRRLH--VDKSFQGTSTPPPSRRL--------SRLALWPERPPSSGN-------SKRCTVHADGRVVVRAAGGNARLVLSSSRNVCEVDFAAQVPGG 109
            L+DFCRRDL+P +AA ++FRNAHS RPYLS+R+H  +++    +S                SR+A WP               S      ADGRV VRAAGGNARL LS+S  V EVD+A  +P G
Sbjct:   81 LSDFCRRDLIPHVAAASSFRNAHSPRPYLSQRIHATLEQGPHNSSXXXXXXXXXXXXXXXPSRIAHWPAAAEPXXXXXXXXXXSTFVVRGADGRVEVRAAGGNARLTLSASGTVAEVDYAVALPPG 206
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig106581.558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LL70_ECTSI2.290e-4941.71DUF4524 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KVD6_9PHAE2.500e-1544.44DUF4524 domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 302..302
IPR027830Domain of unknown function DUF4524PFAMPF15025DUF4524coord: 1..106
e-value: 1.1E-19
score: 70.7

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 302..302
IPR027830Domain of unknown function DUF4524PFAMPF15025DUF4524coord: 1..106
e-value: 1.1E-19
score: 70.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig106581contigF-distichus_contig106581:2..1653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig106581.558.1mRNA_F-distichus_contig106581.558.1Fucus distichus monoicousmRNAF-distichus_contig106581 2..1653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig106581.558.1 ID=prot_F-distichus_contig106581.558.1|Name=mRNA_F-distichus_contig106581.558.1|organism=Fucus distichus monoicous|type=polypeptide|length=302bp
LTDFCRRDLLPQLAAVANFRNAHSSRPYLSRRLHVDKSFQGTSTPPPSRR
LSRLALWPERPPSSGNSKRCTVHADGRVVVRAAGGNARLVLSSSRNVCEV
DFAAQVPGGRRGAHAGRVWVNRQFLVVRAAPPPAEFAHALGVALRAFPAR
GGEEDGGNRPAAVGDEDEVVASKLPVPLGRPDRARWDTVQTSPTFGSSTG
AWPSAFDHHRPLGEWTDVTYSSAASSGGGPANVTPEQRLLAADAMKLAKG
TGFAGPLAAVVESFAGCIYRVVDDGGGFGAGSISGERGAGRGEQGVTVHV
RA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027830DUF4524