prot_F-distichus_contig106304.538.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig106304.538.1
Unique Nameprot_F-distichus_contig106304.538.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length108
Homology
BLAST of mRNA_F-distichus_contig106304.538.1 vs. uniprot
Match: A0A8H7PJ54_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PJ54_MORIS)

HSP 1 Score: 66.2 bits (160), Expect = 2.030e-10
Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 0
Query:   68 RSQHKPGDWDCPSCQFHNFASRQVCFRCDENRPRGP 103
            R+QH+PGDWDCP+C FHNFASR+ CF+C+   P  P
Sbjct:  418 RTQHRPGDWDCPNCSFHNFASRKHCFKCNAENPDAP 453          
BLAST of mRNA_F-distichus_contig106304.538.1 vs. uniprot
Match: UPI001E672EAC (RNA-binding protein cabeza-like isoform X7 n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E672EAC)

HSP 1 Score: 63.5 bits (153), Expect = 5.160e-10
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 0
Query:   57 DSYAPSPRENARSQHKPGDWDCPSCQFHNFASRQVCFRC 95
            D Y+   R ++RS  KPGDWDCPSCQF NFASR  CF+C
Sbjct:   67 DRYSDQDRYSSRSSSKPGDWDCPSCQFSNFASRTACFKC 105          
BLAST of mRNA_F-distichus_contig106304.538.1 vs. uniprot
Match: A0A813K9Q7_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813K9Q7_POLGL)

HSP 1 Score: 62.8 bits (151), Expect = 1.990e-9
Identity = 39/112 (34.82%), Postives = 52/112 (46.43%), Query Frame = 0
Query:    1 CNGCGHHVFASRQACPRCNMAKQYHHRDDDHNHLDDEGTGQYGNHEGQHGGTTSWADS---------YAPSPRENARSQHKPGDWDCPSCQFHNFASRQVCFRCDENRPRGP 103
            C  CG+H FASR+ C +C+ AK              +  G YG      GG      +         YAP+P + A+   +PGDW CPSC  HN+ASR+ C RC   +   P
Sbjct:  145 CEACGNHNFASREVCNKCSGAKT-------------DAGGGYG---AVRGGXXXXRPAPSPYQLPQMYAPAPLQ-AQGNMRPGDWACPSCNNHNYASRENCNRCQRPKNTPP 239          
BLAST of mRNA_F-distichus_contig106304.538.1 vs. uniprot
Match: A0A0P4WHM5_SCYOL (Uncharacterized protein n=2 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4WHM5_SCYOL)

HSP 1 Score: 60.5 bits (145), Expect = 4.060e-9
Identity = 26/46 (56.52%), Postives = 30/46 (65.22%), Query Frame = 0
Query:   55 WADSYAPSP-----RENARSQHKPGDWDCPSCQFHNFASRQVCFRC 95
            W D Y+        R ++RS  KPGDWDCPSCQF NFASR  CF+C
Sbjct:   19 WGDRYSDHDSGSRDRYSSRSNVKPGDWDCPSCQFSNFASRTACFKC 64          
BLAST of mRNA_F-distichus_contig106304.538.1 vs. uniprot
Match: UPI001C48D0E0 (RNA-binding protein cabeza-like isoform X6 n=1 Tax=Homarus americanus TaxID=6706 RepID=UPI001C48D0E0)

HSP 1 Score: 61.2 bits (147), Expect = 4.240e-9
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 0
Query:   50 GGTTSWADSYAPSPRENARSQHKPGDWDCPSCQFHNFASRQVCFRC 95
            GG   +++      R ++RS  KPGDWDCPSCQF NFASR  CF+C
Sbjct:   58 GGWDRYSEDSGSRDRYSSRSSSKPGDWDCPSCQFSNFASRTACFKC 103          
BLAST of mRNA_F-distichus_contig106304.538.1 vs. uniprot
Match: A0A0P4WEJ4_SCYOL (Uncharacterized protein n=2 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4WEJ4_SCYOL)

HSP 1 Score: 60.5 bits (145), Expect = 7.950e-9
Identity = 26/46 (56.52%), Postives = 30/46 (65.22%), Query Frame = 0
Query:   55 WADSYAPSP-----RENARSQHKPGDWDCPSCQFHNFASRQVCFRC 95
            W D Y+        R ++RS  KPGDWDCPSCQF NFASR  CF+C
Sbjct:   19 WGDRYSDHDSGSRDRYSSRSNVKPGDWDCPSCQFSNFASRTACFKC 64          
BLAST of mRNA_F-distichus_contig106304.538.1 vs. uniprot
Match: A0A8H7Q4G1_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q4G1_9FUNG)

HSP 1 Score: 61.6 bits (148), Expect = 8.450e-9
Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 0
Query:   68 RSQHKPGDWDCPSCQFHNFASRQVCFRCDENRP 100
            R+ H+PGDWDCP+C FHNFASR  CF+C+   P
Sbjct:  419 RTSHRPGDWDCPNCYFHNFASRHHCFKCNAENP 451          
BLAST of mRNA_F-distichus_contig106304.538.1 vs. uniprot
Match: A0A5B7FD34_PORTR (Zinc finger protein VAR3, chloroplastic n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=A0A5B7FD34_PORTR)

HSP 1 Score: 60.5 bits (145), Expect = 9.870e-9
Identity = 26/46 (56.52%), Postives = 30/46 (65.22%), Query Frame = 0
Query:   55 WADSYAPSP-----RENARSQHKPGDWDCPSCQFHNFASRQVCFRC 95
            W D Y+        R ++RS  KPGDWDCPSCQF NFASR  CF+C
Sbjct:   19 WGDRYSDHDSGSRDRYSSRSNVKPGDWDCPSCQFSNFASRTACFKC 64          
BLAST of mRNA_F-distichus_contig106304.538.1 vs. uniprot
Match: UPI001E1CCFA7 (E3 SUMO-protein ligase RanBP2-like isoform X1 n=4 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CCFA7)

HSP 1 Score: 60.5 bits (145), Expect = 1.830e-8
Identity = 26/46 (56.52%), Postives = 30/46 (65.22%), Query Frame = 0
Query:   55 WADSYAPSP-----RENARSQHKPGDWDCPSCQFHNFASRQVCFRC 95
            W D Y+        R ++RS  KPGDWDCPSCQF NFASR  CF+C
Sbjct:  140 WGDRYSDHDSGSRDRYSSRSNVKPGDWDCPSCQFSNFASRTACFKC 185          
BLAST of mRNA_F-distichus_contig106304.538.1 vs. uniprot
Match: A0A068RJJ2_9FUNG (Rna binding protein n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RJJ2_9FUNG)

HSP 1 Score: 60.5 bits (145), Expect = 2.130e-8
Identity = 21/38 (55.26%), Postives = 29/38 (76.32%), Query Frame = 0
Query:   66 NARSQHKPGDWDCPSCQFHNFASRQVCFRCDENRPRGP 103
            N+R + +PGDW+CP+C FHNFASR+ CF+C+   P  P
Sbjct:  391 NSRRRVRPGDWNCPNCSFHNFASRRNCFKCNAENPNPP 428          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig106304.538.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8H7PJ54_MORIS2.030e-1063.89Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
UPI001E672EAC5.160e-1064.10RNA-binding protein cabeza-like isoform X7 n=1 Tax... [more]
A0A813K9Q7_POLGL1.990e-934.82Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A0P4WHM5_SCYOL4.060e-956.52Uncharacterized protein n=2 Tax=Scylla olivacea Ta... [more]
UPI001C48D0E04.240e-954.35RNA-binding protein cabeza-like isoform X6 n=1 Tax... [more]
A0A0P4WEJ4_SCYOL7.950e-956.52Uncharacterized protein n=2 Tax=Scylla olivacea Ta... [more]
A0A8H7Q4G1_9FUNG8.450e-963.64Uncharacterized protein n=1 Tax=Umbelopsis vinacea... [more]
A0A5B7FD34_PORTR9.870e-956.52Zinc finger protein VAR3, chloroplastic n=1 Tax=Po... [more]
UPI001E1CCFA71.830e-856.52E3 SUMO-protein ligase RanBP2-like isoform X1 n=4 ... [more]
A0A068RJJ2_9FUNG2.130e-855.26Rna binding protein n=2 Tax=Lichtheimia TaxID=6883... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 1..21
e-value: 13.0
score: 3.2
coord: 74..98
e-value: 9.7E-7
score: 38.4
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 72..96
e-value: 8.7E-11
score: 41.0
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 76..95
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 72..101
score: 10.489
NoneNo IPR availableGENE3D4.10.1060.10coord: 65..106
e-value: 5.9E-14
score: 53.0
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 1..102
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 65..102

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 1..21
e-value: 13.0
score: 3.2
coord: 74..98
e-value: 9.7E-7
score: 38.4
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 72..96
e-value: 8.7E-11
score: 41.0
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 76..95
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 72..101
score: 10.489
NoneNo IPR availableGENE3D4.10.1060.10coord: 65..106
e-value: 5.9E-14
score: 53.0
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 1..102
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 65..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig106304contigF-distichus_contig106304:1611..1934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig106304.538.1mRNA_F-distichus_contig106304.538.1Fucus distichus monoicousmRNAF-distichus_contig106304 1611..1934 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig106304.538.1 ID=prot_F-distichus_contig106304.538.1|Name=mRNA_F-distichus_contig106304.538.1|organism=Fucus distichus monoicous|type=polypeptide|length=108bp
CNGCGHHVFASRQACPRCNMAKQYHHRDDDHNHLDDEGTGQYGNHEGQHG
GTTSWADSYAPSPRENARSQHKPGDWDCPSCQFHNFASRQVCFRCDENRP
RGPGVHQG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf