prot_F-distichus_contig10624.533.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig10624.533.1
Unique Nameprot_F-distichus_contig10624.533.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length59
Homology
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A6H5GI29_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GI29_9HEMI)

HSP 1 Score: 66.6 bits (161), Expect = 2.170e-11
Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    1 IDEIIYIEIPEKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 59
            ++E IY+  P  F E  G V RL KA+YGL QAGRCWN K  + +  + F ++K+DPC+
Sbjct:  344 LNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCI 402          
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI)

HSP 1 Score: 66.6 bits (161), Expect = 2.180e-11
Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    1 IDEIIYIEIPEKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 59
            ++E IY+  P  F E  G V RL KA+YGL QAGRCWN K  + +  + F ++K+DPC+
Sbjct:  949 LNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCI 1007          
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A6H5FUQ5_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5FUQ5_9HEMI)

HSP 1 Score: 65.5 bits (158), Expect = 5.550e-11
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    1 IDEIIYIEIPEKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 59
            +DE IY++ P+ F +  G V RL +++YGL QA RCWN +F D ++ IG   ++ADPC+
Sbjct:  453 LDETIYMQQPDGFNDETGRVCRLTRSLYGLKQAPRCWNKRFVDYLSKIGLHASEADPCL 511          
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A6H5GIQ8_9HEMI (Uncharacterized protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GIQ8_9HEMI)

HSP 1 Score: 65.5 bits (158), Expect = 5.580e-11
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    1 IDEIIYIEIPEKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 59
            +DE IY++ P+ F +  G V RL +++YGL QA RCWN +F D ++ IG   ++ADPC+
Sbjct:  954 LDETIYMQQPDGFNDETGRVCRLTRSLYGLKQAPRCWNKRFVDYLSKIGLHASEADPCL 1012          
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A5S6Q7L0_TRIMR (Integrase catalytic domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6Q7L0_TRIMR)

HSP 1 Score: 63.5 bits (153), Expect = 2.630e-10
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    1 IDEIIYIEIPEKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 59
            ++E IY++ PE F +  G V +L +++YGL QA RCWNN+F + +   G EQ+ ADPC+
Sbjct:  450 LEEEIYMKQPEGFDDGSGRVCKLQRSLYGLKQAPRCWNNRFKEFIRMQGLEQSNADPCL 508          
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A0A9YG03_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YG03_LYGHE)

HSP 1 Score: 61.6 bits (148), Expect = 5.040e-10
Identity = 27/59 (45.76%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    1 IDEIIYIEIPEKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 59
            ++E IYI+ PE F +    V +LN+++YGL QA RCWN +F   +  IGF+Q+ AD C+
Sbjct:   17 LEEEIYIKQPEGFDDGSNKVCKLNRSLYGLKQAPRCWNQRFAAYLLKIGFKQSNADTCL 75          
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A8I6TLX8_CIMLE (Integrase catalytic domain-containing protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6TLX8_CIMLE)

HSP 1 Score: 62.4 bits (150), Expect = 6.770e-10
Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    1 IDEIIYIEIPEKFQELP-GAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 59
            ID+ IY+  PE+ +  P G V  L +A+YGL Q+GRCWN +    +T +G +Q+KADPC+
Sbjct:  480 IDKEIYVIPPEEMKNKPKGKVWLLKRAMYGLKQSGRCWNQRLHTVMTGLGLQQSKADPCI 539          
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A2S2NPY8_SCHGA (Copia protein (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2NPY8_SCHGA)

HSP 1 Score: 62.0 bits (149), Expect = 9.190e-10
Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    1 IDEIIYIEIPEKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 59
            ++E IYIE P  F E    V RL+KA+YGL QA +CWNN+F   +T IGF ++  D C+
Sbjct:  184 VNEEIYIEQPCGFSENNNLVCRLHKALYGLKQASKCWNNRFHQFLTKIGFTRSNTDHCL 242          
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A0A9X2C2_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9X2C2_LYGHE)

HSP 1 Score: 60.1 bits (144), Expect = 1.170e-9
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 0
Query:    1 IDEIIYIEIPEKFQELP--GAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 59
            I+E IY+  P +  E    G V RL+KA+YGL Q+GRCWNNK    +  +G +Q+ ADPC+
Sbjct:  100 IEEEIYVLPPPELLEPAENGKVWRLHKAMYGLKQSGRCWNNKIDSVLRELGLKQSSADPCI 160          
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A146LHR9_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A146LHR9_LYGHE)

HSP 1 Score: 61.6 bits (148), Expect = 1.260e-9
Identity = 27/59 (45.76%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    1 IDEIIYIEIPEKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 59
            ++E IYI+ PE F +    V +LN+++YGL QA RCWN +F   +  IGF+Q+ AD C+
Sbjct:  363 LEEEIYIKQPEGFDDGSNKVCKLNRSLYGLKQAPRCWNQRFAAFLLKIGFKQSNADTCL 421          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5GI29_9HEMI2.170e-1147.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5GGZ1_9HEMI2.180e-1147.46Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5FUQ5_9HEMI5.550e-1145.76Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5GIQ8_9HEMI5.580e-1145.76Uncharacterized protein (Fragment) n=2 Tax=Nesidio... [more]
A0A5S6Q7L0_TRIMR2.630e-1045.76Integrase catalytic domain-containing protein n=1 ... [more]
A0A0A9YG03_LYGHE5.040e-1045.76Retrovirus-related Pol polyprotein from transposon... [more]
A0A8I6TLX8_CIMLE6.770e-1046.67Integrase catalytic domain-containing protein n=1 ... [more]
A0A2S2NPY8_SCHGA9.190e-1049.15Copia protein (Fragment) n=1 Tax=Schizaphis gramin... [more]
A0A0A9X2C2_LYGHE1.170e-947.54Retrovirus-related Pol polyprotein from transposon... [more]
A0A146LHR9_LYGHE1.260e-945.76Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..55
e-value: 1.5E-8
score: 34.6

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..55
e-value: 1.5E-8
score: 34.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10624contigF-distichus_contig10624:1637..1813 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10624.533.1mRNA_F-distichus_contig10624.533.1Fucus distichus monoicousmRNAF-distichus_contig10624 1637..1813 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig10624.533.1 ID=prot_F-distichus_contig10624.533.1|Name=mRNA_F-distichus_contig10624.533.1|organism=Fucus distichus monoicous|type=polypeptide|length=59bp
IDEIIYIEIPEKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGF
EQAKADPCV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2