mRNA_F-distichus_contig10624.533.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A6H5GI29_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GI29_9HEMI) HSP 1 Score: 66.6 bits (161), Expect = 2.170e-11 Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 1 IDEIIYIEIPEKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 177
++E IY+ P F E G V RL KA+YGL QAGRCWN K + + + F ++K+DPC+
Sbjct: 344 LNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCI 402
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI) HSP 1 Score: 66.6 bits (161), Expect = 2.180e-11 Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 1 IDEIIYIEIPEKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 177
++E IY+ P F E G V RL KA+YGL QAGRCWN K + + + F ++K+DPC+
Sbjct: 949 LNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCI 1007
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A6H5FUQ5_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5FUQ5_9HEMI) HSP 1 Score: 65.5 bits (158), Expect = 5.550e-11 Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 1 IDEIIYIEIPEKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 177
+DE IY++ P+ F + G V RL +++YGL QA RCWN +F D ++ IG ++ADPC+
Sbjct: 453 LDETIYMQQPDGFNDETGRVCRLTRSLYGLKQAPRCWNKRFVDYLSKIGLHASEADPCL 511
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A6H5GIQ8_9HEMI (Uncharacterized protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GIQ8_9HEMI) HSP 1 Score: 65.5 bits (158), Expect = 5.580e-11 Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 1 IDEIIYIEIPEKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 177
+DE IY++ P+ F + G V RL +++YGL QA RCWN +F D ++ IG ++ADPC+
Sbjct: 954 LDETIYMQQPDGFNDETGRVCRLTRSLYGLKQAPRCWNKRFVDYLSKIGLHASEADPCL 1012
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A8I6TLX8_CIMLE (Integrase catalytic domain-containing protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6TLX8_CIMLE) HSP 1 Score: 62.4 bits (150), Expect = 6.770e-10 Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 1 IDEIIYIEIPEKFQELP-GAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 177
ID+ IY+ PE+ + P G V L +A+YGL Q+GRCWN + +T +G +Q+KADPC+
Sbjct: 480 IDKEIYVIPPEEMKNKPKGKVWLLKRAMYGLKQSGRCWNQRLHTVMTGLGLQQSKADPCI 539
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A2S2NPY8_SCHGA (Copia protein (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2NPY8_SCHGA) HSP 1 Score: 62.0 bits (149), Expect = 9.190e-10 Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 1 IDEIIYIEIPEKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 177
++E IYIE P F E V RL+KA+YGL QA +CWNN+F +T IGF ++ D C+
Sbjct: 184 VNEEIYIEQPCGFSENNNLVCRLHKALYGLKQASKCWNNRFHQFLTKIGFTRSNTDHCL 242
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A0A9X2C2_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9X2C2_LYGHE) HSP 1 Score: 60.1 bits (144), Expect = 1.170e-9 Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 1 IDEIIYIEIPEKFQELP--GAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 177
I+E IY+ P + E G V RL+KA+YGL Q+GRCWNNK + +G +Q+ ADPC+
Sbjct: 100 IEEEIYVLPPPELLEPAENGKVWRLHKAMYGLKQSGRCWNNKIDSVLRELGLKQSSADPCI 160
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A0A9XEE3_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9XEE3_LYGHE) HSP 1 Score: 61.2 bits (147), Expect = 1.710e-9 Identity = 29/60 (48.33%), Postives = 38/60 (63.33%), Query Frame = 1
Query: 1 IDEIIYIEIP-EKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 177
+ E IY+ P E G V RL KAIYGL QAGRCWN K C + + F++++ADPC+
Sbjct: 96 LGEEIYVRPPPELLNPAEGKVWRLRKAIYGLKQAGRCWNAKICSVLKKMKFKKSEADPCI 155
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM) HSP 1 Score: 61.2 bits (147), Expect = 1.740e-9 Identity = 28/59 (47.46%), Postives = 37/59 (62.71%), Query Frame = 1
Query: 1 IDEIIYIEIPEKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 177
++E I++E PE F + G V RL +YGL QAGR WN K +T +GF + ADPCV
Sbjct: 976 LEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCV 1034
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Match: A0A0J7JZ17_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7JZ17_LASNI) HSP 1 Score: 60.8 bits (146), Expect = 2.230e-9 Identity = 25/59 (42.37%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 1 IDEIIYIEIPEKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFEQAKADPCV 177
++EIIY+ PE + + V +L K++YGL QA RCWN +F + + +GF+ ++ADPC+
Sbjct: 17 LEEIIYMRQPEGYDDSSSRVCQLKKSLYGLKQAPRCWNKRFGNFFSKLGFKVSEADPCL 75 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10624.533.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10624.533.1 >prot_F-distichus_contig10624.533.1 ID=prot_F-distichus_contig10624.533.1|Name=mRNA_F-distichus_contig10624.533.1|organism=Fucus distichus monoicous|type=polypeptide|length=59bp IDEIIYIEIPEKFQELPGAVGRLNKAIYGLVQAGRCWNNKFCDDVTAIGFback to top mRNA from alignment at F-distichus_contig10624:1637..1813- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10624.533.1 ID=mRNA_F-distichus_contig10624.533.1|Name=mRNA_F-distichus_contig10624.533.1|organism=Fucus distichus monoicous|type=mRNA|length=177bp|location=Sequence derived from alignment at F-distichus_contig10624:1637..1813- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10624:1637..1813- >mRNA_F-distichus_contig10624.533.1 ID=mRNA_F-distichus_contig10624.533.1|Name=mRNA_F-distichus_contig10624.533.1|organism=Fucus distichus monoicous|type=CDS|length=354bp|location=Sequence derived from alignment at F-distichus_contig10624:1637..1813- (Fucus distichus monoicous)back to top |