prot_F-distichus_contig105908.504.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-distichus_contig105908.504.1
Unique Name	prot_F-distichus_contig105908.504.1
Type	polypeptide
Organism	Fucus distichus monoicous (Fucus distichus monoicous)
Sequence length	110

Homology

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BLAST of mRNA_F-distichus_contig105908.504.1 vs. uniprot
Match: D8LM73_ECTSI (MCM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM73_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 1.430e-59
Identity = 97/110 (88.18%), Postives = 105/110 (95.45%), Query Frame = 0

Query:    1 ELLRRWKPVFEGVRCDVQVTLKANSVIVQSGLDQGTSQVSEEIRQEFVDLWKVNAHRPLAVRNHIVASVCPQIFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVV 110
            ELLRRW PVFEGVRCDVQVTL+ANSV VQSG DQG+SQVSEE+RQEFV+LW+ N HRPLAVRNH++ASVCPQ+FGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVV
Sbjct:  249 ELLRRWMPVFEGVRCDVQVTLRANSVTVQSGADQGSSQVSEELRQEFVELWEANTHRPLAVRNHVIASVCPQVFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVV 358

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BLAST of mRNA_F-distichus_contig105908.504.1 vs. uniprot
Match: A0A6H5JSZ1_9PHAE (MCM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ1_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 2.080e-39
Identity = 65/72 (90.28%), Postives = 71/72 (98.61%), Query Frame = 0

Query:   39 VSEEIRQEFVDLWKVNAHRPLAVRNHIVASVCPQIFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVV 110
            VSEE+RQEFV+LW+ NAHRPLAVRNH++ASVCPQ+FGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVV
Sbjct:  172 VSEELRQEFVELWEANAHRPLAVRNHVIASVCPQVFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVV 243

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BLAST of mRNA_F-distichus_contig105908.504.1 vs. uniprot
Match: H3GDF8_PHYRM (MCM domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GDF8_PHYRM)

HSP 1 Score: 120 bits (301), Expect = 2.080e-29
Identity = 55/111 (49.55%), Postives = 78/111 (70.27%), Query Frame = 0

Query:    2 LLRRWKPVFEGVRCDVQVTLKANSVIVQSGLDQGTSQV--SEEIRQEFVDLWKVNAHRPLAVRNHIVASVCPQIFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVV 110
            L+R WKP   GVRCD++ T+KANS+ +++     TSQV  +EE+R EF   W  +   P+  RN IVAS+CP+++GLF VKLA+ LT+IGGV+  D  GM+ RG PH+L++
Sbjct:  607 LMRTWKPCVRGVRCDLETTIKANSIRIKNA---STSQVLVTEELRAEFAQFWAKHKRNPMRARNEIVASICPKVYGLFIVKLAVALTVIGGVSYVDETGMKTRGEPHMLLI 714

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BLAST of mRNA_F-distichus_contig105908.504.1 vs. uniprot
Match: UPI00077A6424 (DNA helicase MCM9-like n=2 Tax=Acropora TaxID=6127 RepID=UPI00077A6424)

HSP 1 Score: 120 bits (300), Expect = 2.800e-29
Identity = 55/109 (50.46%), Postives = 76/109 (69.72%), Query Frame = 0

Query:    2 LLRRWKPVFEGVRCDVQVTLKANSVIVQSGLDQGTSQVSEEIRQEFVDLWKVNAHRPLAVRNHIVASVCPQIFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVV 110
            ++RRWKPV+   RCD+++ LKAN V V +G   G   V+EE+++EF + W+ +   PL  RNHI+AS CPQ++GL+ VKLA+ L +IGGV   DP G R RG  HLL+V
Sbjct:  248 VMRRWKPVYADSRCDLELVLKANHVSVNNGQRAGVV-VTEELKREFAEFWEKHKDSPLQARNHILASFCPQVYGLYVVKLAVALVIIGGVQRIDPSGTRVRGESHLLLV 355

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BLAST of mRNA_F-distichus_contig105908.504.1 vs. uniprot
Match: D0N2F2_PHYIT (DNA replication licensing factor MCM9 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N2F2_PHYIT)

HSP 1 Score: 119 bits (297), Expect = 7.140e-29
Identity = 55/111 (49.55%), Postives = 78/111 (70.27%), Query Frame = 0

Query:    2 LLRRWKPVFEGVRCDVQVTLKANSVIVQSGLDQGTSQV--SEEIRQEFVDLWKVNAHRPLAVRNHIVASVCPQIFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVV 110
            L+R WKP   GVRCD++ T+KANS+ +++     TSQV  +EE+R EF   W  +   P+  RN IVAS+CP+++GLF VKLA+ LT+IGGV+  D  GM+ RG PH+L++
Sbjct:  409 LMRTWKPCVRGVRCDLETTIKANSIRIKNAT---TSQVLVTEELRAEFAQFWSKHKRHPVRGRNEIVASICPKVYGLFIVKLAVALTVIGGVSYVDETGMKTRGEPHMLLI 516

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BLAST of mRNA_F-distichus_contig105908.504.1 vs. uniprot
Match: A0A218UEY1_9PASE (DNA helicase MCM9 n=2 Tax=Passeriformes TaxID=9126 RepID=A0A218UEY1_9PASE)

HSP 1 Score: 116 bits (291), Expect = 1.240e-28
Identity = 56/109 (51.38%), Postives = 75/109 (68.81%), Query Frame = 0

Query:    2 LLRRWKPVFEGVRCDVQVTLKANSVIVQSGLDQGTSQVSEEIRQEFVDLWKVNAHRPLAVRNHIVASVCPQIFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVV 110
            +++RWKP  EG RCD+++ LKAN V V +    G   + EE+R+EF D WK + + PLA RN I+AS+CPQ+FGL+ VKLA+ + L GGV  TD  G R RG  HLL+V
Sbjct:  256 VMQRWKPFHEGARCDLELVLKANYVKVNNEQLAGVV-IDEEVRKEFEDFWKRHKNDPLAGRNEILASLCPQVFGLYLVKLAVAMVLAGGVQRTDAAGTRTRGESHLLLV 363

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BLAST of mRNA_F-distichus_contig105908.504.1 vs. uniprot
Match: A0A2P4Y5F4_9STRA (DNA replication licensing factor MCM9 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y5F4_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.310e-28
Identity = 55/111 (49.55%), Postives = 78/111 (70.27%), Query Frame = 0

Query:    2 LLRRWKPVFEGVRCDVQVTLKANSVIVQSGLDQGTSQV--SEEIRQEFVDLWKVNAHRPLAVRNHIVASVCPQIFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVV 110
            L+R WKP   GVRCD++ T+KANS+ +++     TSQV  +EE+R EF   W  +   P+  RN IVAS+CP+++GLF VKLA+ LT+IGGV+  D  GM+ RG PH+L++
Sbjct:  482 LMRTWKPCVRGVRCDLETTIKANSIRIKNA---STSQVFVTEELRAEFTQFWAKHKRDPVRGRNEIVASICPKVYGLFIVKLAVALTVIGGVSYVDDTGMKTRGEPHMLLI 589

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BLAST of mRNA_F-distichus_contig105908.504.1 vs. uniprot
Match: G4YSN4_PHYSP (MCM domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=G4YSN4_PHYSP)

HSP 1 Score: 118 bits (295), Expect = 1.320e-28
Identity = 55/111 (49.55%), Postives = 78/111 (70.27%), Query Frame = 0

Query:    2 LLRRWKPVFEGVRCDVQVTLKANSVIVQSGLDQGTSQV--SEEIRQEFVDLWKVNAHRPLAVRNHIVASVCPQIFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVV 110
            L+R WKP   GVRCD++ T+KANS+ +++     TSQV  +EE+R EF   W  +   P+  RN IVAS+CP+++GLF VKLA+ LT+IGGV+  D  GM+ RG PH+L++
Sbjct:  287 LMRTWKPCVRGVRCDLETTIKANSIRIKNAT---TSQVLVTEELRAEFAQFWAKHKRDPIRGRNEIVASICPKVYGLFIVKLAVALTVIGGVSYVDETGMKTRGEPHMLLI 394

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BLAST of mRNA_F-distichus_contig105908.504.1 vs. uniprot
Match: A0A225WGV4_9STRA (DNA replication licensing factor (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WGV4_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.340e-28
Identity = 55/111 (49.55%), Postives = 78/111 (70.27%), Query Frame = 0

Query:    2 LLRRWKPVFEGVRCDVQVTLKANSVIVQSGLDQGTSQV--SEEIRQEFVDLWKVNAHRPLAVRNHIVASVCPQIFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVV 110
            L+R WKP   GVRCD++ T+KANS+ +++     TSQV  +EE+R EF   W  +   P+  RN IVAS+CP+++GLF VKLA+ LT+IGGV+  D  GM+ RG PH+L++
Sbjct:  582 LMRTWKPCVRGVRCDLETTIKANSIRIKNAT---TSQVLVTEELRAEFAQFWARHKRDPVRGRNEIVASICPKVYGLFIVKLAVALTVIGGVSHVDEAGMKTRGEPHMLLI 689

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BLAST of mRNA_F-distichus_contig105908.504.1 vs. uniprot
Match: UPI000529B013 (DNA helicase MCM9-like n=1 Tax=Colius striatus TaxID=57412 RepID=UPI000529B013)

HSP 1 Score: 111 bits (278), Expect = 1.850e-28
Identity = 54/109 (49.54%), Postives = 74/109 (67.89%), Query Frame = 0

Query:    2 LLRRWKPVFEGVRCDVQVTLKANSVIVQSGLDQGTSQVSEEIRQEFVDLWKVNAHRPLAVRNHIVASVCPQIFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVV 110
            +++RWKP  E  RCD+++ LKAN V V +    G   + EE+R+EF D W+ + + PLA RN I+AS+CPQ+FGL+ VKLA+ + L GGV  TD  G R RG  HLL+V
Sbjct:   37 VMQRWKPFREDARCDLELVLKANYVKVNNEQLAGVV-IDEEVRKEFEDFWEKHRNDPLAGRNEILASLCPQVFGLYVVKLAVAMVLAGGVQRTDATGTRIRGESHLLLV 144

The following BLAST results are available for this feature:

BLAST of mRNA_F-distichus_contig105908.504.1 vs. uniprot

BLAST of mRNA_F-distichus_contig105908.504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LM73_ECTSI	1.430e-59	88.18	MCM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JSZ1_9PHAE	2.080e-39	90.28	MCM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
H3GDF8_PHYRM	2.080e-29	49.55	MCM domain-containing protein n=1 Tax=Phytophthora...	[more]
UPI00077A6424	2.800e-29	50.46	DNA helicase MCM9-like n=2 Tax=Acropora TaxID=6127...	[more]
D0N2F2_PHYIT	7.140e-29	49.55	DNA replication licensing factor MCM9 n=2 Tax=Phyt...	[more]
A0A218UEY1_9PASE	1.240e-28	51.38	DNA helicase MCM9 n=2 Tax=Passeriformes TaxID=9126...	[more]
A0A2P4Y5F4_9STRA	1.310e-28	49.55	DNA replication licensing factor MCM9 n=1 Tax=Phyt...	[more]
G4YSN4_PHYSP	1.320e-28	49.55	MCM domain-containing protein n=7 Tax=Phytophthora...	[more]
A0A225WGV4_9STRA	1.340e-28	49.55	DNA replication licensing factor (Fragment) n=1 Ta...	[more]
UPI000529B013	1.850e-28	49.54	DNA helicase MCM9-like n=1 Tax=Colius striatus Tax...	[more]

Pages

InterPro

Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 52..110 e-value: 1.4E-10 score: 42.9
None	No IPR available	PANTHER	PTHR11630:SF48	DNA HELICASE MCM9	coord: 3..110
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 73..92
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 93..110
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..72
IPR001208	MCM domain	PFAM	PF00493	MCM	coord: 60..110 e-value: 1.1E-7 score: 31.2
IPR031327	Mini-chromosome maintenance protein	PANTHER	PTHR11630	DNA REPLICATION LICENSING FACTOR	coord: 3..110

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 52..110 e-value: 1.4E-10 score: 42.9
None	No IPR available	PANTHER	PTHR11630:SF48	DNA HELICASE MCM9	coord: 3..110
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 73..92
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 93..110
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..72
IPR001208	MCM domain	PFAM	PF00493	MCM	coord: 60..110 e-value: 1.1E-7 score: 31.2
IPR031327	Mini-chromosome maintenance protein	PANTHER	PTHR11630	DNA REPLICATION LICENSING FACTOR	coord: 3..110

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-distichus_contig105908	contig	F-distichus_contig105908:639..1867 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Fucus distichus monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-distichus_contig105908.504.1	mRNA_F-distichus_contig105908.504.1	Fucus distichus monoicous	mRNA	F-distichus_contig105908 637..1867 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-distichus_contig105908.504.1 ID=prot_F-distichus_contig105908.504.1|Name=mRNA_F-distichus_contig105908.504.1|organism=Fucus distichus monoicous|type=polypeptide|length=110bp
ELLRRWKPVFEGVRCDVQVTLKANSVIVQSGLDQGTSQVSEEIRQEFVDL
WKVNAHRPLAVRNHIVASVCPQIFGLFTVKLAILLTLIGGVTETDPRGMR
RRGTPHLLVV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001208	MCM_dom
IPR031327	MCM