prot_F-distichus_contig105907.503.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig105907.503.1
Unique Nameprot_F-distichus_contig105907.503.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length58
Homology
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BLAST of mRNA_F-distichus_contig105907.503.1 vs. uniprot
Match: A0A6H5KBR4_9PHAE (Protein CASP (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR4_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 6.740e-13
Identity = 40/58 (68.97%), Postives = 47/58 (81.03%), Query Frame = 0 
Query:    1 MSAQQHRERQRQRVDTLEDCLRQRDAEMTKLKDEVSSLKTKNEYLTARVLQLEAEAGE 58
            MSAQQHRERQRQRVDTLEDCLR RD E+ KL+ +V+SL  +N+ L  RVLQLE+  GE
Sbjct:  240 MSAQQHRERQRQRVDTLEDCLRLRDNEIAKLEKQVASLTERNKELAERVLQLESVGGE 297
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BLAST of mRNA_F-distichus_contig105907.503.1 vs. uniprot
Match: D7FWU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU5_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 1.610e-6
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 0 
Query:    1 MSAQQHRERQRQRVDTLEDCLRQRDAEMTKLKDEVSSLKTKNEYLTA 47
            MSAQQHRERQRQRVDTLEDCLR RD E+ +L+ +++S  +  E ++A
Sbjct:    1 MSAQQHRERQRQRVDTLEDCLRLRDNEIARLEKQLASSSSSAEGVSA 47
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig105907.503.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KBR4_9PHAE6.740e-1368.97Protein CASP (Fragment) n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWU5_ECTSI1.610e-661.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 21..48
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 2..50

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 21..48
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 2..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig105907contigF-distichus_contig105907:935..1863 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig105907.503.1mRNA_F-distichus_contig105907.503.1Fucus distichus monoicousmRNAF-distichus_contig105907 935..1890 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig105907.503.1 ID=prot_F-distichus_contig105907.503.1|Name=mRNA_F-distichus_contig105907.503.1|organism=Fucus distichus monoicous|type=polypeptide|length=58bp
MSAQQHRERQRQRVDTLEDCLRQRDAEMTKLKDEVSSLKTKNEYLTARVL
QLEAEAGE
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