prot_F-distichus_contig105865.500.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig105865.500.1
Unique Nameprot_F-distichus_contig105865.500.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length106
Homology
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BLAST of mRNA_F-distichus_contig105865.500.1 vs. uniprot
Match: A0A6H5JNH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNH0_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 5.150e-26
Identity = 63/113 (55.75%), Postives = 71/113 (62.83%), Query Frame = 0 
Query:    6 PLLCGSVPADLPGEGSVGGDWEEVDENY------------EGDEKEEDDDLGEAGREAWGEDTMVSGDPATIARAFGHAVDFVVDAGVLEVGGFSTIVDAVGAEPVVLREGIG 106
            PLLCGSVP+ +PG+G    DW E                 EG+            R AWG+D  VSGDPA I  A+GHAVDFVVDAG LEVGGFST+VDAVGAEPVVLREG+G
Sbjct:   37 PLLCGSVPSGVPGDG----DWGEXXXXXXXXXXXXXXXXVEGE---------RVSRGAWGDDAAVSGDPAAIEAAWGHAVDFVVDAGPLEVGGFSTVVDAVGAEPVVLREGLG 136
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig105865.500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JNH0_9PHAE5.150e-2655.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.870.10coord: 50..106
e-value: 5.6E-7
score: 30.8
IPR017945DHBP synthase RibB-like alpha/beta domain superfamilySUPERFAMILY55821YrdC/RibBcoord: 60..105

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.870.10coord: 50..106
e-value: 5.6E-7
score: 30.8
IPR017945DHBP synthase RibB-like alpha/beta domain superfamilySUPERFAMILY55821YrdC/RibBcoord: 60..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig105865contigF-distichus_contig105865:4..693 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig105865.500.1mRNA_F-distichus_contig105865.500.1Fucus distichus monoicousmRNAF-distichus_contig105865 4..1326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig105865.500.1 ID=prot_F-distichus_contig105865.500.1|Name=mRNA_F-distichus_contig105865.500.1|organism=Fucus distichus monoicous|type=polypeptide|length=106bp
MNASRPLLCGSVPADLPGEGSVGGDWEEVDENYEGDEKEEDDDLGEAGRE
AWGEDTMVSGDPATIARAFGHAVDFVVDAGVLEVGGFSTIVDAVGAEPVV
LREGIG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017945DHBP_synth_RibB-like_a/b_dom