prot_F-distichus_contig105684.483.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig105684.483.1
Unique Nameprot_F-distichus_contig105684.483.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length137
Homology
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BLAST of mRNA_F-distichus_contig105684.483.1 vs. uniprot
Match: A0A6H5JCT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT8_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 5.910e-41
Identity = 76/130 (58.46%), Postives = 91/130 (70.00%), Query Frame = 0 
Query:    8 ASSTKELDPNHARVLVVGPILSGKTTLVESLCRACGGDTVASRRNRRPPPTVGCNVEVKLLAGGRPYRSVEFWDVGGNPEAAPARRMFYEDSSISGVLLVYDVTNPRRAFLSWSLRELHAWAAELASAGV 137
            AS+ K  DP+HAR+LVVGP+ +GKTTLV S C    G+ V   R     PTVGC+V+VKLLAGG P RS+EFWDVGG P+AA AR MF+E    +GVLLVYDV+ PR      SLR+L  W AEL SAG+
Sbjct:    3 ASAGKNFDPHHARILVVGPMAAGKTTLVHSFCHGGVGNGVPGNRL----PTVGCSVDVKLLAGGHPNRSIEFWDVGGRPDAALARGMFFEGCEAAGVLLVYDVSTPR------SLRDLRVWVAELDSAGI 122
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BLAST of mRNA_F-distichus_contig105684.483.1 vs. uniprot
Match: D8LGP2_ECTSI (LIP1, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP2_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 1.150e-39
Identity = 77/130 (59.23%), Postives = 92/130 (70.77%), Query Frame = 0 
Query:    8 ASSTKELDPNHARVLVVGPILSGKTTLVESLCRACGGDTVASRRNRRPPPTVGCNVEVKLLAGGRPYRSVEFWDVGGNPEAAPARRMFYEDSSISGVLLVYDVTNPRRAFLSWSLRELHAWAAELASAGV 137
            AS+ K  DP+HARVLVVGP+ +GKTTLV S C   GG+ V         PTVGC+V+VKLLAGG P RS+EFWDVGG+P+AA AR MF+E    +GVLLVYDV+ PR      SLR+L  W AEL SAG+
Sbjct:    3 ASAGKNFDPHHARVLVVGPMAAGKTTLVHSFCHGGGGNGVPGNTL----PTVGCSVDVKLLAGGHPNRSIEFWDVGGSPDAALARGMFFEGCEAAGVLLVYDVSIPR------SLRDLRVWVAELDSAGI 122
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig105684.483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JCT8_9PHAE5.910e-4158.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGP2_ECTSI1.150e-3959.23LIP1, Ras superfamily GTPase n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 8..136
e-value: 1.8E-15
score: 58.6
NoneNo IPR availablePFAMPF08477Roccoord: 20..131
e-value: 1.7E-7
score: 31.4
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 19..119
NoneNo IPR availablePANTHERPTHR24073:SF128RAB-LIKE PROTEIN 3coord: 19..119
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 17..118

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 8..136
e-value: 1.8E-15
score: 58.6
NoneNo IPR availablePFAMPF08477Roccoord: 20..131
e-value: 1.7E-7
score: 31.4
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 19..119
NoneNo IPR availablePANTHERPTHR24073:SF128RAB-LIKE PROTEIN 3coord: 19..119
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 17..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig105684contigF-distichus_contig105684:23..1582 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig105684.483.1mRNA_F-distichus_contig105684.483.1Fucus distichus monoicousmRNAF-distichus_contig105684 23..1582 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig105684.483.1 ID=prot_F-distichus_contig105684.483.1|Name=mRNA_F-distichus_contig105684.483.1|organism=Fucus distichus monoicous|type=polypeptide|length=137bp
MYSFPEGASSTKELDPNHARVLVVGPILSGKTTLVESLCRACGGDTVASR
RNRRPPPTVGCNVEVKLLAGGRPYRSVEFWDVGGNPEAAPARRMFYEDSS
ISGVLLVYDVTNPRRAFLSWSLRELHAWAAELASAGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase