prot_F-distichus_contig105560.480.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig105560.480.1
Unique Nameprot_F-distichus_contig105560.480.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length82
Homology
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: D7FTG3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTG3_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 7.490e-36
Identity = 62/82 (75.61%), Postives = 73/82 (89.02%), Query Frame = 0
Query:    1 RSVGEHPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRKLQFETGHTRNILGVRILPSTNDQV 82
            R++G+HPS+I+RLRHTATLRGH+ CVNRLCWND GT IASGSDDTTVCLFDAA+ KR +QF+TGH RNIL V+ LP TNDQ+
Sbjct:   84 RNLGQHPSMIQRLRHTATLRGHSGCVNRLCWNDAGTRIASGSDDTTVCLFDAASGKRDVQFQTGHRRNILSVKFLPCTNDQI 165          
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: A0A485LQN6_9STRA (Aste57867_24505 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQN6_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.140e-16
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0
Query:    1 RSVGEHPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRKLQFETGHTRNILGVRILPSTNDQV 82
            R +  H ++++RL   + L  H  CVNRLCWN +GT +ASGSDDT V L+D  T   +   ETGH+ NI GV  +P TND +
Sbjct:   27 RQLQAHAALVKRLVCDSVLNKHDGCVNRLCWNQSGTTLASGSDDTRVILWDYNTRTARHVIETGHSMNIFGVCFVPGTNDHI 108          
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: M2XUM7_GALSU (WD and tetratricopeptide repeats protein 1 isoform 1 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XUM7_GALSU)

HSP 1 Score: 80.5 bits (197), Expect = 7.440e-16
Identity = 37/81 (45.68%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    2 SVGEHPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRKLQFETGHTRNILGVRILPSTNDQV 82
            ++  H S  ++L + ATL+GH+ CVNRL +N+ G+ + SGSDD  + ++D A    + Q ETGH RNI GVR +P TND++
Sbjct:   31 NILSHSSFFQKLENIATLKGHSGCVNRLSFNEEGSLLLSGSDDCRLLVWDVAEGTLRDQVETGHDRNIFGVRFIPCTNDRL 111          
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: A0A1V9Z7T1_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z7T1_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.400e-15
Identity = 39/82 (47.56%), Postives = 50/82 (60.98%), Query Frame = 0
Query:    1 RSVGEHPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRKLQFETGHTRNILGVRILPSTNDQV 82
            R +  H +++ RL   A L+ H  CVNRLCWN  GT +ASGSDDT V L+D    K +    TGH+ NI GV  +P TND +
Sbjct:  253 RLIQGHGALVRRLVCDAVLQTHDGCVNRLCWNQQGTILASGSDDTRVVLWDYQRRKPRHVITTGHSMNIFGVAFVPGTNDHI 334          
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: A0A2P6TIU3_CHLSO (WD and tetratricopeptide repeats 1-like n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TIU3_CHLSO)

HSP 1 Score: 77.0 bits (188), Expect = 1.260e-14
Identity = 39/71 (54.93%), Postives = 48/71 (67.61%), Query Frame = 0
Query:   11 ERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRK-LQFETGHTRNILGVRILPSTND 80
            +RL   A LRGH+ CVNRLCWN++G+ +ASGSDD  V L+    T+R+ L  ET H  NI GVR LP T D
Sbjct:   32 KRLSIEAVLRGHSGCVNRLCWNESGSLLASGSDDRKVMLWSYPDTQRQPLSIETEHQANIFGVRFLPQTGD 102          
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: A0A7S0E4J1_9CRYP (Hypothetical protein n=2 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E4J1_9CRYP)

HSP 1 Score: 76.3 bits (186), Expect = 2.300e-14
Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 0
Query:    6 HPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRKLQFETGHTRNILGVRILPSTND 80
            H ++I++L     LRGH  CVNRLCWNDTGT +AS SDD    L+D       ++  TGH RNI GV  +P +ND
Sbjct:   29 HRALIDKLTLDQELRGHTGCVNRLCWNDTGTKLASVSDDCKCILWDV-NRHTHVEISTGHERNIFGVAFIPESND 102          
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: A0A024FVU5_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FVU5_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 5.860e-14
Identity = 36/77 (46.75%), Postives = 46/77 (59.74%), Query Frame = 0
Query:    6 HPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRKLQFETGHTRNILGVRILPSTNDQV 82
            H + I+RL+    L GH  CVN LCWN TGT +ASGSDD  V +++  T KR    +T H  N+  V  +P TND V
Sbjct:   60 HQAFIQRLQCDNVLEGHLGCVNHLCWNQTGTLLASGSDDANVIVWNYQTKKRLEVIQTKHRLNVFAVCFVPGTNDHV 136          
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: L1JDY1_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JDY1_GUITC)

HSP 1 Score: 73.9 bits (180), Expect = 1.490e-13
Identity = 36/75 (48.00%), Postives = 46/75 (61.33%), Query Frame = 0
Query:    6 HPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRKLQFETGHTRNILGVRILPSTND 80
            H S++++L     LRGHA CVNRLCWN+TGT +AS SDD    ++D       L+  T H RNI GV  +P  ND
Sbjct:   13 HKSLVDKLTLHKELRGHAGCVNRLCWNETGTKLASVSDDCKCIIWDVNRNSH-LEISTEHERNIFGVAFIPERND 86          
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: A0A2P6V1B7_9CHLO (WD and tetratricopeptide repeats 1-like n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V1B7_9CHLO)

HSP 1 Score: 73.9 bits (180), Expect = 1.500e-13
Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    8 SIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRK-LQFETGHTRNILGVRILPSTND 80
            S  +RL   A LRGH  CVNR+CWN++G+ +ASGSDD  V L+    T+R+ +  +T H  NI GVR LP T D
Sbjct:   30 SAAQRLSLEAVLRGHNGCVNRMCWNESGSLLASGSDDRKVLLWSYPDTQRQPIALQTEHQANIFGVRFLPQTGD 103          
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: A0A2D4CB75_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CB75_PYTIN)

HSP 1 Score: 73.2 bits (178), Expect = 2.790e-13
Identity = 35/81 (43.21%), Postives = 48/81 (59.26%), Query Frame = 0
Query:    2 SVGEHPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRKLQFETGHTRNILGVRILPSTNDQV 82
            ++  H +++ RL   ATL  H  CVN L WN+ GT +ASGSDDT + L+D AT + +    TGH  NI  V  +P T D +
Sbjct:   54 TLQSHGALLRRLAVDATLESHRGCVNHLRWNEQGTLLASGSDDTRLILWDYATHRVRADIATGHVLNIFAVCFVPGTQDHI 134          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTG3_ECTSI7.490e-3675.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A485LQN6_9STRA2.140e-1647.56Aste57867_24505 protein n=1 Tax=Aphanomyces stella... [more]
M2XUM7_GALSU7.440e-1645.68WD and tetratricopeptide repeats protein 1 isoform... [more]
A0A1V9Z7T1_9STRA1.400e-1547.56Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A2P6TIU3_CHLSO1.260e-1454.93WD and tetratricopeptide repeats 1-like n=1 Tax=Ch... [more]
A0A7S0E4J1_9CRYP2.300e-1449.33Hypothetical protein n=2 Tax=Hanusia phi TaxID=303... [more]
A0A024FVU5_9STRA5.860e-1446.75Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
L1JDY1_GUITC1.490e-1348.00Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A2P6V1B7_9CHLO1.500e-1350.00WD and tetratricopeptide repeats 1-like n=1 Tax=Mi... [more]
A0A2D4CB75_PYTIN2.790e-1343.21Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 12..51
e-value: 7.0E-7
score: 38.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 15..51
e-value: 4.3E-7
score: 30.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 19..60
score: 10.408
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 6..82
e-value: 4.0E-14
score: 54.3
NoneNo IPR availablePANTHERPTHR15574WD REPEAT DOMAIN-CONTAINING FAMILYcoord: 4..81
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 19..82
score: 10.838
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 13..77

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 12..51
e-value: 7.0E-7
score: 38.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 15..51
e-value: 4.3E-7
score: 30.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 19..60
score: 10.408
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 6..82
e-value: 4.0E-14
score: 54.3
NoneNo IPR availablePANTHERPTHR15574WD REPEAT DOMAIN-CONTAINING FAMILYcoord: 4..81
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 19..82
score: 10.838
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 13..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig105560contigF-distichus_contig105560:1001..1597 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig105560.480.1mRNA_F-distichus_contig105560.480.1Fucus distichus monoicousmRNAF-distichus_contig105560 1001..1597 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig105560.480.1 ID=prot_F-distichus_contig105560.480.1|Name=mRNA_F-distichus_contig105560.480.1|organism=Fucus distichus monoicous|type=polypeptide|length=82bp
RSVGEHPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLF
DAATTKRKLQFETGHTRNILGVRILPSTNDQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf