prot_F-distichus_contig105365.463.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-distichus_contig105365.463.1
Unique Name	prot_F-distichus_contig105365.463.1
Type	polypeptide
Organism	Fucus distichus monoicous (Fucus distichus monoicous)
Sequence length	70

Homology

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BLAST of mRNA_F-distichus_contig105365.463.1 vs. uniprot
Match: D8LB75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB75_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 1.410e-19
Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 0

Query:    3 ILDADGTNDLDIDEFTTTMMKLMTDGPDEATLERGRRVVVTEAFKKADTDHSGSLDVDEVTALLKEAD 70
            +LDADGT  LDIDEFT+TMM+LMTDGPDE TL R RR  +T+AF +ADTD SGSLD  E+  LLK +D
Sbjct: 1265 LLDADGTETLDIDEFTSTMMRLMTDGPDEVTLARARRQALTKAFDEADTDGSGSLDAGEILELLKSSD 1332

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BLAST of mRNA_F-distichus_contig105365.463.1 vs. uniprot
Match: A0A6H5K9E5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E5_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.500e-17
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 0

Query:    7 DGTNDLDIDEFTTTMMKLMTDGPDEATLERGRRVVVTEAFKKADTDHSGSLDVDEVTALLKEAD 70
            DGT+ LDIDEFT+TMM+LMTDGPDE TL R RR  +T+AF +ADTD SGSLD  E+  LLK +D
Sbjct: 1296 DGTDTLDIDEFTSTMMRLMTDGPDEVTLARARRQALTKAFDEADTDGSGSLDAGEILELLKSSD 1359

The following BLAST results are available for this feature:

BLAST of mRNA_F-distichus_contig105365.463.1 vs. uniprot

BLAST of mRNA_F-distichus_contig105365.463.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LB75_ECTSI	1.410e-19	67.65	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K9E5_9PHAE	1.500e-17	67.19	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13405	EF-hand_6	coord: 44..67 e-value: 4.5E-5 score: 23.1
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 37..70 score: 11.166
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 1..27 score: 8.488
None	No IPR available	GENE3D	1.10.238.10		coord: 1..69 e-value: 1.4E-10 score: 43.0
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 50..62
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 5..17
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 2..69

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13405	EF-hand_6	coord: 44..67 e-value: 4.5E-5 score: 23.1
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 37..70 score: 11.166
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 1..27 score: 8.488
None	No IPR available	GENE3D	1.10.238.10		coord: 1..69 e-value: 1.4E-10 score: 43.0
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 50..62
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 5..17
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 2..69

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-distichus_contig105365	contig	F-distichus_contig105365:1378..1587 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Fucus distichus monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-distichus_contig105365.463.1	mRNA_F-distichus_contig105365.463.1	Fucus distichus monoicous	mRNA	F-distichus_contig105365 1378..1587 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-distichus_contig105365.463.1 ID=prot_F-distichus_contig105365.463.1|Name=mRNA_F-distichus_contig105365.463.1|organism=Fucus distichus monoicous|type=polypeptide|length=70bp
YRILDADGTNDLDIDEFTTTMMKLMTDGPDEATLERGRRVVVTEAFKKAD
TDHSGSLDVDEVTALLKEAD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR018247	EF_Hand_1_Ca_BS
IPR011992	EF-hand-dom_pair