prot_F-distichus_contig105159.453.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig105159.453.1
Unique Nameprot_F-distichus_contig105159.453.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length71
Homology
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BLAST of mRNA_F-distichus_contig105159.453.1 vs. uniprot
Match: A0A6H5JG00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG00_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 2.240e-25
Identity = 45/66 (68.18%), Postives = 57/66 (86.36%), Query Frame = 0 
Query:    4 AEVAFKQSIQEDPSLSDAWNGLGA-VSRDPLMSQHCWVRAVQLGHNPSAWANLGMLYIRWGLDEQV 68
            AE AF++S++ DP+ S+AWNGLGA +S+ PL+ QHCWVR+VQL HNPSAWANLGMLY+RWG+D Q 
Sbjct:  448 AEEAFRRSVEADPAYSEAWNGLGATMSQKPLVQQHCWVRSVQLEHNPSAWANLGMLYVRWGMDIQA 513
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BLAST of mRNA_F-distichus_contig105159.453.1 vs. uniprot
Match: D7G059_ECTSI (Similar to Tetratricopeptide repeat protein 37 (TPR repeat protein 37) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G059_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 7.790e-25
Identity = 45/66 (68.18%), Postives = 56/66 (84.85%), Query Frame = 0 
Query:    4 AEVAFKQSIQEDPSLSDAWNGLGA-VSRDPLMSQHCWVRAVQLGHNPSAWANLGMLYIRWGLDEQV 68
            AE AF++S++ DP+ S+AWNGLGA +S  PL+ QHCWVR+VQL HNPSAWANLGMLY+RWG+D Q 
Sbjct:  969 AEEAFRRSVEADPAYSEAWNGLGATMSGRPLVQQHCWVRSVQLEHNPSAWANLGMLYVRWGMDIQA 1034
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BLAST of mRNA_F-distichus_contig105159.453.1 vs. uniprot
Match: A0A484DT53_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DT53_BRELC)

HSP 1 Score: 70.5 bits (171), Expect = 1.610e-12
Identity = 28/57 (49.12%), Postives = 42/57 (73.68%), Query Frame = 0 
Query:    4 AEVAFKQSIQEDPSLSDAWNGLGAVSRDPLMSQHCWVRAVQLGHNPSAWANLGMLYI 60
            A   FK ++++DPS + AWNGL  VS++ L+ Q CW RA+Q G++ ++WANLGM Y+
Sbjct:  892 ASTNFKLALKKDPSCALAWNGLALVSKNVLVKQFCWARAIQSGNSDASWANLGMFYL 948
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BLAST of mRNA_F-distichus_contig105159.453.1 vs. uniprot
Match: A0A293MWB5_ORNER (Tetratricopeptide repeat protein 37 (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MWB5_ORNER)

HSP 1 Score: 50.8 bits (120), Expect = 1.350e-5
Identity = 25/63 (39.68%), Postives = 42/63 (66.67%), Query Frame = 0 
Query:    4 AEVAFKQSIQEDPSLSDAWNGLGAVS-----RDPLMSQHCWVRAVQLGH-NPSAWANLGMLYI 60
            A V+ ++++  +P+   AWN LG V+     ++  ++QHC +++VQL   NP+AWANLG LY+
Sbjct:  484 ALVSVQKAVSLNPADPAAWNMLGVVALAKDIKNGALAQHCLIKSVQLESCNPTAWANLGALYL 546
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig105159.453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JG00_9PHAE2.240e-2568.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G059_ECTSI7.790e-2568.18Similar to Tetratricopeptide repeat protein 37 (TP... [more]
A0A484DT53_BRELC1.610e-1249.12Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A293MWB5_ORNER1.350e-539.68Tetratricopeptide repeat protein 37 (Fragment) n=1... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..68
e-value: 1.3E-6
score: 29.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..67
IPR039226Ski3/TTC37PANTHERPTHR15704SUPERKILLER 3 PROTEIN-RELATEDcoord: 1..61
NoneNo IPR availablePANTHERPTHR15704:SF7TETRATRICOPEPTIDE REPEAT PROTEIN 37coord: 1..61

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..68
e-value: 1.3E-6
score: 29.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..67
IPR039226Ski3/TTC37PANTHERPTHR15704SUPERKILLER 3 PROTEIN-RELATEDcoord: 1..61
NoneNo IPR availablePANTHERPTHR15704:SF7TETRATRICOPEPTIDE REPEAT PROTEIN 37coord: 1..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig105159contigF-distichus_contig105159:394..606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig105159.453.1mRNA_F-distichus_contig105159.453.1Fucus distichus monoicousmRNAF-distichus_contig105159 394..606 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig105159.453.1 ID=prot_F-distichus_contig105159.453.1|Name=mRNA_F-distichus_contig105159.453.1|organism=Fucus distichus monoicous|type=polypeptide|length=71bp
LSLAEVAFKQSIQEDPSLSDAWNGLGAVSRDPLMSQHCWVRAVQLGHNPS
AWANLGMLYIRWGLDEQVTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR039226Ski3/TTC37