prot_F-distichus_contig105158.452.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig105158.452.1
Unique Nameprot_F-distichus_contig105158.452.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length62
Homology
[Close]
BLAST of mRNA_F-distichus_contig105158.452.1 vs. uniprot
Match: D8LBW9_ECTSI (Novel cap binding protein nCBP n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBW9_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 4.440e-8
Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = 0 
Query:   29 SEDVISVWNRSASNTESIEKIREAVKRLIKIP 60
            SEDVISVWNRSASNTE IEKIR+ VKRL++IP
Sbjct:  218 SEDVISVWNRSASNTEGIEKIRDTVKRLLQIP 249
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig105158.452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBW9_ECTSI4.440e-884.38Novel cap binding protein nCBP n=2 Tax=Ectocarpus ... [more]
back to top
InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023398Translation Initiation factor eIF- 4e-likeSUPERFAMILY55418eIF4e-likecoord: 29..61

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023398Translation Initiation factor eIF- 4e-likeSUPERFAMILY55418eIF4e-likecoord: 29..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig105158contigF-distichus_contig105158:4..189 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig105158.452.1mRNA_F-distichus_contig105158.452.1Fucus distichus monoicousmRNAF-distichus_contig105158 4..189 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig105158.452.1 ID=prot_F-distichus_contig105158.452.1|Name=mRNA_F-distichus_contig105158.452.1|organism=Fucus distichus monoicous|type=polypeptide|length=62bp
PPHTAVPSVSLFGDTEWPVSWTGNCLSRSEDVISVWNRSASNTESIEKIR
EAVKRLIKIPPT
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023398TIF_eIF4e-like