prot_F-distichus_contig10503.439.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig10503.439.1
Unique Nameprot_F-distichus_contig10503.439.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length141
Homology
BLAST of mRNA_F-distichus_contig10503.439.1 vs. uniprot
Match: D7FXB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXB5_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 1.540e-37
Identity = 63/102 (61.76%), Postives = 80/102 (78.43%), Query Frame = 0
Query:    7 SMVDSLPAMMYGAGDDEHPLPETVACMQHLVADYVRHVTSEACMAAEVKGRLDTECFVFAVRHDKPKFKRVKHILDSDLRTKNYMHMSFADDNLLAIFHPSF 108
            S+ DSLP MMYG GD++HPLPETVA MQ +V +YV++VT +AC AAEVKG+LDTECFV AVR+DK KFKRVK +LD ++  KN     + DDNL  ++HP+F
Sbjct:   23 SIADSLPMMMYGFGDEQHPLPETVAYMQEVVGEYVQYVTDKACKAAEVKGKLDTECFVLAVRNDKAKFKRVKELLDMNVHIKNCTRQRYVDDNL-TVYHPTF 123          
BLAST of mRNA_F-distichus_contig10503.439.1 vs. uniprot
Match: A0A3R7KXI2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KXI2_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 7.870e-16
Identity = 35/91 (38.46%), Postives = 58/91 (63.74%), Query Frame = 0
Query:    5 GESMVDSLPAMMYGAGDDEHPLPETVACMQHLVADYVRHVTSEACMAAEVKGRLDTECFVFAVRHDKPKFKRVKHILDSDLRTKNYMHMSF 95
            G  +V+S+  MM+G GD+  PL ET A M+ LV +YV  +T +A   A +KG+LDTECF+F +R D  +++R+  +L ++   +  ++  F
Sbjct:   76 GGELVESIKHMMFGFGDEAEPLDETAALMEDLVVEYVHAMTKKAMEMATIKGKLDTECFIFLIRKDPERYERISELLRANDEFRAVLNSGF 166          
BLAST of mRNA_F-distichus_contig10503.439.1 vs. uniprot
Match: Q8QN96_ESV1K (EsV-1-193 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN96_ESV1K)

HSP 1 Score: 73.9 bits (180), Expect = 4.880e-15
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0
Query:   15 MMYGAGDDEHPLPETVACMQHLVADYVRHVTSEACMAA 52
            MMYGAGDDEHPLPETVACMQ LVA+YV HVTSEAC+ +
Sbjct:    9 MMYGAGDDEHPLPETVACMQQLVAEYVSHVTSEACLVS 46          
BLAST of mRNA_F-distichus_contig10503.439.1 vs. uniprot
Match: F0WG55_9STRA (Uncharacterized protein AlNc14C88G5585 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG55_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 7.100e-15
Identity = 35/85 (41.18%), Postives = 54/85 (63.53%), Query Frame = 0
Query:   11 SLPAMMYGAGDDEHPLPETVACMQHLVADYVRHVTSEACMAAEVKGRLDTECFVFAVRHDKPKFKRVKHILDSDLRTKNYMHMSF 95
            S+  MM G GDD  P+ E+VA M+  V +Y+  +T +A   + VKG+LDTECF+F +R D+ K+ RVK +L ++   K  ++  F
Sbjct:   58 SVRDMMIGFGDDMEPMEESVAVMKEFVVEYIHCMTKKAVDVSAVKGKLDTECFIFTIRKDQEKYGRVKDLLQANDELKEVLNSGF 142          
BLAST of mRNA_F-distichus_contig10503.439.1 vs. uniprot
Match: D8LPL2_ECTSI (EsV-1-193/196 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL2_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 1.600e-14
Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 0
Query:   15 MMYGAGDDEHPLPETVACMQHLVADYVRHVTSEACMAA 52
            MMYGAGDDEHPLPETV CMQ LVA+YV HVTSEAC+ +
Sbjct:    1 MMYGAGDDEHPLPETVGCMQQLVAEYVSHVTSEACLVS 38          
BLAST of mRNA_F-distichus_contig10503.439.1 vs. uniprot
Match: A0A5D6XFL5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFL5_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.490e-14
Identity = 32/88 (36.36%), Postives = 57/88 (64.77%), Query Frame = 0
Query:    8 MVDSLPAMMYGAGDDEHPLPETVACMQHLVADYVRHVTSEACMAAEVKGRLDTECFVFAVRHDKPKFKRVKHILDSDLRTKNYMHMSF 95
            +++S+  MM+G GD+  PL ET A M+ +  +YV  +T +A   A+VKG+LDTECF+F +R D  +++R+  +L ++   +  ++  F
Sbjct:  116 LIESIKHMMFGFGDEVEPLDETAALMEDMTVEYVHAMTKKALDLAQVKGKLDTECFIFLIRKDPERYERIAELLRANDELRAVLNSGF 203          
BLAST of mRNA_F-distichus_contig10503.439.1 vs. uniprot
Match: Q8QN93_ESV1K (EsV-1-196 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN93_ESV1K)

HSP 1 Score: 72.0 bits (175), Expect = 4.790e-14
Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0
Query:   14 AMMYGAGDDEHPLPETVACMQHLVADYVRHVTSEACMAA 52
            +MMYGAGDDEHPLPETV CMQ LVA+YV HVTSEAC+ +
Sbjct:   31 SMMYGAGDDEHPLPETVDCMQQLVAEYVSHVTSEACLVS 69          
BLAST of mRNA_F-distichus_contig10503.439.1 vs. uniprot
Match: A0A8K1CG97_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG97_PYTOL)

HSP 1 Score: 74.7 bits (182), Expect = 6.030e-14
Identity = 32/88 (36.36%), Postives = 57/88 (64.77%), Query Frame = 0
Query:    8 MVDSLPAMMYGAGDDEHPLPETVACMQHLVADYVRHVTSEACMAAEVKGRLDTECFVFAVRHDKPKFKRVKHILDSDLRTKNYMHMSF 95
            +V+++  MM+G GD+  PL ET   M+ LV +Y + +T +A   + VKG+LDTECF+F +R D  +++R+K +L ++   +  ++  F
Sbjct:   91 LVETIKHMMFGFGDEAEPLDETAELMEDLVVEYAQSMTKKAMELSLVKGKLDTECFIFLIRKDPERYERIKELLRANDEFRAVLNSGF 178          
BLAST of mRNA_F-distichus_contig10503.439.1 vs. uniprot
Match: A0A2P4X0B0_9STRA (Transcription initiation factor TFIID subunit TAF13 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X0B0_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.420e-14
Identity = 31/74 (41.89%), Postives = 49/74 (66.22%), Query Frame = 0
Query:    8 MVDSLPAMMYGAGDDEHPLPETVACMQHLVADYVRHVTSEACMAAEVKGRLDTECFVFAVRHDKPKFKRVKHIL 81
            +V+S+  M++G GD+  PL ET   M+ LV +YV  +T +A   A +KG+LDTECF+F +R D  ++ R+  +L
Sbjct:   32 LVESIKHMLFGFGDEVEPLDETAELMEDLVVEYVHAMTKKAMELATIKGKLDTECFIFLIRKDPERYDRIAELL 105          
BLAST of mRNA_F-distichus_contig10503.439.1 vs. uniprot
Match: A0A024GE83_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GE83_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 7.820e-14
Identity = 34/88 (38.64%), Postives = 54/88 (61.36%), Query Frame = 0
Query:    8 MVDSLPAMMYGAGDDEHPLPETVACMQHLVADYVRHVTSEACMAAEVKGRLDTECFVFAVRHDKPKFKRVKHILDSDLRTKNYMHMSF 95
            + DS+  MM G GD   P+ E++  MQ  V +Y++ +T +A   A VKG+LDTECF+F +R D   ++RVK +L ++   K  ++  F
Sbjct:   55 LSDSVRDMMIGFGDHMEPMEESIIVMQDFVVEYIQCMTKKAVDIATVKGKLDTECFIFPIRKDHETYERVKDLLQANGELKEVLNSGF 142          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10503.439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXB5_ECTSI1.540e-3761.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A3R7KXI2_9STRA7.870e-1638.46Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
Q8QN96_ESV1K4.880e-1584.21EsV-1-193 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
F0WG55_9STRA7.100e-1541.18Uncharacterized protein AlNc14C88G5585 n=1 Tax=Alb... [more]
D8LPL2_ECTSI1.600e-1481.58EsV-1-193/196 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A5D6XFL5_9STRA2.490e-1436.36Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
Q8QN93_ESV1K4.790e-1479.49EsV-1-196 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
A0A8K1CG97_PYTOL6.030e-1436.36Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4X0B0_9STRA6.420e-1441.89Transcription initiation factor TFIID subunit TAF1... [more]
A0A024GE83_9STRA7.820e-1438.64Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003195Transcription initiation factor IID, subunit 13PFAMPF02269TFIID-18kDacoord: 12..88
e-value: 2.5E-16
score: 59.5
IPR003195Transcription initiation factor IID, subunit 13PANTHERPTHR11380TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATEDcoord: 9..86
IPR009072Histone-foldGENE3D1.10.20.10coord: 9..50
e-value: 7.0E-12
score: 46.7
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 11..49
NoneNo IPR availablePANTHERPTHR11380:SF5TRANSCRIPTION INITIATION PROTEIN SPT3 HOMOLOGcoord: 9..86

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003195Transcription initiation factor IID, subunit 13PFAMPF02269TFIID-18kDacoord: 12..88
e-value: 2.5E-16
score: 59.5
IPR003195Transcription initiation factor IID, subunit 13PANTHERPTHR11380TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATEDcoord: 9..86
IPR009072Histone-foldGENE3D1.10.20.10coord: 9..50
e-value: 7.0E-12
score: 46.7
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 11..49
NoneNo IPR availablePANTHERPTHR11380:SF5TRANSCRIPTION INITIATION PROTEIN SPT3 HOMOLOGcoord: 9..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10503contigF-distichus_contig10503:5904..6563 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10503.439.1mRNA_F-distichus_contig10503.439.1Fucus distichus monoicousmRNAF-distichus_contig10503 4910..6563 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig10503.439.1 ID=prot_F-distichus_contig10503.439.1|Name=mRNA_F-distichus_contig10503.439.1|organism=Fucus distichus monoicous|type=polypeptide|length=141bp
MEGDGESMVDSLPAMMYGAGDDEHPLPETVACMQHLVADYVRHVTSEACM
AAEVKGRLDTECFVFAVRHDKPKFKRVKHILDSDLRTKNYMHMSFADDNL
LAIFHPSFEAVSPPKPSSASVPASDGKATVPSSVAESKGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003195TFIID_TAF13
IPR009072Histone-fold