prot_F-distichus_contig103963.350.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig103963.350.1
Unique Nameprot_F-distichus_contig103963.350.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length118
Homology
BLAST of mRNA_F-distichus_contig103963.350.1 vs. uniprot
Match: D7G0D5_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0D5_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 1.260e-52
Identity = 82/117 (70.09%), Postives = 95/117 (81.20%), Query Frame = 0
Query:    1 IVAAQSGIYFPGLGYEAVPWYQQFDEFVAKNPVGLLQLVLFFAVMEGYYYPGEFWSGGGDREAGDLGLYLKKPTQEKLDQLRLSELKNGRLAIFAVAAFTSEHWISGSVPALSGQGF 117
            I AAQSG  FPGLGY+AVPWY QF EF +KNP GL QL+LFFAV EG  Y G+FWSGGG+REAGDLGLYLKKP +  +++LRL ELKNGRLA+ +VAA  SEHWI G+VP L GQG+
Sbjct:  100 IWAAQSGFVFPGLGYDAVPWYDQFHEFASKNPGGLAQLMLFFAVAEGATYCGDFWSGGGEREAGDLGLYLKKPGKAAVEKLRLQELKNGRLAMISVAACASEHWIKGAVPFLEGQGY 216          
BLAST of mRNA_F-distichus_contig103963.350.1 vs. uniprot
Match: A0A836CLY0_9STRA (Light harvesting complex protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLY0_9STRA)

HSP 1 Score: 107 bits (268), Expect = 3.280e-27
Identity = 55/118 (46.61%), Postives = 75/118 (63.56%), Query Frame = 0
Query:    6 SGIYFPGLGYEAVPWYQQFDEFVAKNPVGLLQLVLFFAVMEGYY--YPGEFWSGGGDREAGDLGL----YLKKPTQEKLDQLRLSELKNGRLAIFAVAAFTSEHWISGSVPALSGQGF 117
            +GI+ PGL Y    WY  F EF AKNP+GL Q++    + EG+Y    G  W+G G R  G+LG      +K  ++  ++ ++L E+KNGRLA+ A+A F SEH+I GSVP LSGQGF
Sbjct:   63 AGIHIPGLDY-TTDWYNSFPEFAAKNPLGLAQVMAGLTIWEGHYGTEAGLMWTGEGTRNPGELGFDPLNLMKGKSEADVNTMKLKEIKNGRLAMIAMAGFASEHFIPGSVPLLSGQGF 179          
BLAST of mRNA_F-distichus_contig103963.350.1 vs. uniprot
Match: A0A7S2SV94_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV94_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.340e-26
Identity = 56/120 (46.67%), Postives = 76/120 (63.33%), Query Frame = 0
Query:    2 VAAQSGIYFPG-LG---YEAVPWYQQFDEFVAKNPVGLLQLVLFFAVMEGYYYPGEFWSGGGDREAGDLGLYL---KKPTQEKLDQLRLSELKNGRLAIFAVAAFTSEHWISGSVPALSG 114
            +AA +G+ FPG LG   YE   WY      V+ N  G+ QL +  A++EG  +PGEFW+GGG+REAGDLG       K     LD++++SELKNGRLA+ A+A   +EH + GSVP + G
Sbjct:   96 MAAATGVVFPGDLGGFHYEPCAWYDGLASAVSTNSFGMAQLFIAIALVEGNAFPGEFWTGGGEREAGDLGFLPFGDAKKNNRDLDEMKISELKNGRLAMIAMAGLFAEHQLPGSVPLIPG 215          
BLAST of mRNA_F-distichus_contig103963.350.1 vs. uniprot
Match: A0A7S2BU75_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BU75_9STRA)

HSP 1 Score: 103 bits (256), Expect = 7.490e-25
Identity = 56/116 (48.28%), Postives = 73/116 (62.93%), Query Frame = 0
Query:    4 AQSGIYFPG-LG---YEAVPWYQQFDEFVAKNPVGLLQLVLFFAVMEGYYYPGEFWSGGGDREAGDLGLYLKKPTQEK---LDQLRLSELKNGRLAIFAVAAFTSEHWISGSVPAL 112
            A +G+ FPG LG   YEA  WY      ++ N  G+ QL++   ++EG+ +P EFW GGGDREAGDLG        +     D+LRLSELKNGRLA+ A+A F S+H + GSVP L
Sbjct:  113 AANGVVFPGDLGGFHYEACAWYDGLASGLSTNSFGMAQLLMTIGLIEGFSFPAEFWVGGGDREAGDLGFLPFGDAAKNGRDFDELRLSELKNGRLAMIAMAGFFSQHQLPGSVPFL 228          
BLAST of mRNA_F-distichus_contig103963.350.1 vs. uniprot
Match: Q9ATC4_VAULI (Light harvesting complex protein 2 (Fragment) n=4 Tax=Eukaryota TaxID=2759 RepID=Q9ATC4_VAULI)

HSP 1 Score: 100 bits (248), Expect = 1.580e-24
Identity = 54/118 (45.76%), Postives = 74/118 (62.71%), Query Frame = 0
Query:    6 SGIYFPGLGYEAVPWYQQFDEFVAKNPVGLLQLVLFFAVMEGYY--YPGEFWSGGGDREAGDLGLYL----KKPTQEKLDQLRLSELKNGRLAIFAVAAFTSEHWISGSVPALSGQGF 117
            +GI+ P LGY +  WY  F EFVAKNP+GL Q++    + EG++    G  W+G  +R+ G L   L    K   + +L  ++L E+KNGRLA+ A+AAF SEH+ISGSVP L   GF
Sbjct:   34 AGIHIPNLGYTS-DWYNSFPEFVAKNPLGLAQVIAGLTIWEGFHGTETGLMWTGEANRKPGHLNFDLLNLMKGKNESQLKSIQLKEIKNGRLAMVAMAAFASEHFISGSVPLLDLFGF 150          
BLAST of mRNA_F-distichus_contig103963.350.1 vs. uniprot
Match: I2CR44_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR44_NANGC)

HSP 1 Score: 99.4 bits (246), Expect = 1.050e-23
Identity = 53/116 (45.69%), Postives = 71/116 (61.21%), Query Frame = 0
Query:    1 IVAAQSGIYFPGLGYEAVPWYQQFDEFVAKNPVGLLQLVLFFAVMEGYYYPGEFWSGGGDREAGDLGL----YLKKPTQEKLDQLRLSELKNGRLAIFAVAAFTSEHWISGSVPAL 112
            IV    G+Y P    E   + Q F + +  NP+G+ Q+ L  A++EG+YY G+FW+GGGDRE G  G     + K  ++  L  +RL ELKNGRLA+ A+AAF SE  I GSVP L
Sbjct:   74 IVPGSLGVYVPTYPQEP-DFTQAFYKALQNNPLGMAQIALAIAIIEGHYYAGDFWTGGGDREVGAFGFDPLGFSKGKSEAALKSMRLKELKNGRLAMIAMAAFASEKLIPGSVPLL 188          
BLAST of mRNA_F-distichus_contig103963.350.1 vs. uniprot
Match: A0A7S0NXV2_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NXV2_9EUKA)

HSP 1 Score: 87.0 bits (214), Expect = 1.410e-18
Identity = 51/120 (42.50%), Postives = 67/120 (55.83%), Query Frame = 0
Query:    1 IVAAQSGIYFPGLGYEAVPWYQQFDEFVAKNPVGLLQLVLFFAVMEGYYYPGEF--WSGG-GDREAGDLG---LYLKKPTQEKLDQLRLSELKNGRLAIFAVAAFTSEHWISGSVPALSG 114
            I+A   G++ PG  +    W        AKNP G+LQ+V    V+EG    G F  W G    RE G++G   L L  PT+   D++RL ELKNGR+A+ AVA F + H+I GSVP L G
Sbjct:  115 ILATNGGLHLPGEFWTDSDWTSALGSTFAKNPSGMLQIVAAIGVIEGTSSKGLFDLWLGNTATREPGNIGFDPLKLMPPTKVAADKMRLKELKNGRMAMIAVAGFAANHFIPGSVPGLQG 234          
BLAST of mRNA_F-distichus_contig103963.350.1 vs. uniprot
Match: A0A6V1SPG2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SPG2_HETAK)

HSP 1 Score: 83.2 bits (204), Expect = 2.390e-17
Identity = 47/120 (39.17%), Postives = 63/120 (52.50%), Query Frame = 0
Query:    1 IVAAQSGIYFPGLGYEAVPWYQQFDEFVAKNPVGLLQLVLFFAVMEGYYYPGEFWSGGGDREAGDLGL----YLKKPTQEKLDQLRLSELKNGRLAIFAVAAFTSEHWISGSVPALSGQG 116
            + A   G   PG   E   W   + E + KNP+  +Q++LF  ++EG  YPGE W G G R  G LG     + KK    ++ QL+  ELKNGR A+ A+AA+ S   I GSVP     G
Sbjct:   90 VFATSIGARIPGYPVETKDWTAAYGEMIEKNPLAFVQILLFIGIIEGVTYPGELWFGEG-RAPGALGYDPLGFAKKDKTPEVTQLK--ELKNGRAAMIAMAAYASHELIPGSVPLYDALG 206          
BLAST of mRNA_F-distichus_contig103963.350.1 vs. uniprot
Match: A0A7S3TCZ6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TCZ6_9SPIT)

HSP 1 Score: 80.9 bits (198), Expect = 1.090e-16
Identity = 52/120 (43.33%), Postives = 71/120 (59.17%), Query Frame = 0
Query:    2 VAAQSGIYFPGLGYEAVP-WYQQFDE-FVAKNP-VGLLQLVLFFAVMEGYYYPGEFWSGGGDREAGDLG---LYLKKPTQEKLDQLRLSELKNGRLAIFAVAAFTSEHWISGSVPALSGQ 115
            +  QS +  PG  Y A P W +     + +K P +G++Q+ +FF ++EG ++P   W G  DRE GDLG   L L K     L + +LSELKNGRLA+ A AAF + H I G+VP LSG 
Sbjct:   16 IVVQSIVQIPG--YPAEPDWTKALAACYASKVPTLGIVQISVFFMLVEGRFFPENAWIGQMDREPGDLGFDPLKLSKKPGFDLKKKQLSELKNGRLAMIACAAFGANHVIPGAVPLLSGS 133          
BLAST of mRNA_F-distichus_contig103963.350.1 vs. uniprot
Match: Q5ENN0_HETTR (Chloroplast light harvesting complex protein n=1 Tax=Heterocapsa triquetra TaxID=66468 RepID=Q5ENN0_HETTR)

HSP 1 Score: 83.6 bits (205), Expect = 2.190e-16
Identity = 52/118 (44.07%), Postives = 68/118 (57.63%), Query Frame = 0
Query:    2 VAAQSGIYFPGLGYEAVPWYQQFDE-FVAKNP-VGLLQLVLFFAVMEGYYYPGEFWSGGGDREAGDLG---LYLKKPTQEKLDQLRLSELKNGRLAIFAVAAFTSEHWISGSVPALSG 114
            +  QS +  PG   E   W       + +K P +GL+Q+ +FF ++EG Y+P   W G  DRE GDLG   L L K     L + +L ELKNGRLA+ AVAAF + H I GSVP L+G
Sbjct:  168 IVVQSIVQIPGYPQEP-DWLNALSACYASKVPTLGLVQMSVFFMLVEGRYFPENAWIGQMDREPGDLGFDPLKLTKKPGFDLKKAQLQELKNGRLAMIAVAAFAANHVIPGSVPLLTG 284          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig103963.350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D7G0D5_ECTSI1.260e-5270.09Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A836CLY0_9STRA3.280e-2746.61Light harvesting complex protein 2 n=1 Tax=Tribone... [more]
A0A7S2SV94_9STRA2.340e-2646.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2BU75_9STRA7.490e-2548.28Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
Q9ATC4_VAULI1.580e-2445.76Light harvesting complex protein 2 (Fragment) n=4 ... [more]
I2CR44_NANGC1.050e-2345.69Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A7S0NXV2_9EUKA1.410e-1842.50Hypothetical protein n=2 Tax=Calcidiscus leptoporu... [more]
A0A6V1SPG2_HETAK2.390e-1739.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3TCZ6_9SPIT1.090e-1643.33Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
Q5ENN0_HETTR2.190e-1644.07Chloroplast light harvesting complex protein n=1 T... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10coord: 4..113
e-value: 2.2E-8
score: 36.1
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 20..102
e-value: 2.9E-8
score: 34.4
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 25..108

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10coord: 4..113
e-value: 2.2E-8
score: 36.1
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 20..102
e-value: 2.9E-8
score: 34.4
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 25..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig103963contigF-distichus_contig103963:140..1659 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig103963.350.1mRNA_F-distichus_contig103963.350.1Fucus distichus monoicousmRNAF-distichus_contig103963 140..1659 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig103963.350.1 ID=prot_F-distichus_contig103963.350.1|Name=mRNA_F-distichus_contig103963.350.1|organism=Fucus distichus monoicous|type=polypeptide|length=118bp
IVAAQSGIYFPGLGYEAVPWYQQFDEFVAKNPVGLLQLVLFFAVMEGYYY
PGEFWSGGGDREAGDLGLYLKKPTQEKLDQLRLSELKNGRLAIFAVAAFT
SEHWISGSVPALSGQGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023329Chlorophyll_a/b-bd_dom_sf
IPR022796Chloroa_b-bind