prot_F-distichus_contig103360.296.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig103360.296.1
Unique Nameprot_F-distichus_contig103360.296.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length68
Homology
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BLAST of mRNA_F-distichus_contig103360.296.1 vs. uniprot
Match: D7FZY9_ECTSI (Ribonuclease H n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY9_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 2.120e-13
Identity = 41/71 (57.75%), Postives = 48/71 (67.61%), Query Frame = 0 
Query:    1 GFSGAEFKKFKSENDAAAYVKDQHTRAREEPG---PPPPGSTTLWFDGGSRGNPGMSGAGAVIFDDSEKEL 68
            GF GA+F+KFK+  +A  Y         +E G   P P G +TLWFDGG RGNPG SGAGAVIF+DSEKEL
Sbjct:   10 GFPGADFRKFKTPEEATDYAN-----LVDEGGGLNPAPAGWSTLWFDGGCRGNPGPSGAGAVIFNDSEKEL 75
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BLAST of mRNA_F-distichus_contig103360.296.1 vs. uniprot
Match: A0A6H5L4R0_9PHAE (RNase H type-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4R0_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 2.160e-13
Identity = 41/71 (57.75%), Postives = 48/71 (67.61%), Query Frame = 0 
Query:    1 GFSGAEFKKFKSENDAAAYVKDQHTRAREEPG---PPPPGSTTLWFDGGSRGNPGMSGAGAVIFDDSEKEL 68
            GF GA+F+KFK+  +A  Y         +E G   P P G +TLWFDGG RGNPG SGAGAVIF+DSEKEL
Sbjct:   33 GFPGADFRKFKTPEEATDYAN-----LVDEGGGLNPAPAGWSTLWFDGGCRGNPGPSGAGAVIFNDSEKEL 98
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig103360.296.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZY9_ECTSI2.120e-1357.75Ribonuclease H n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5L4R0_9PHAE2.160e-1357.75RNase H type-1 domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 38..65

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 38..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig103360contigF-distichus_contig103360:221..424 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig103360.296.1mRNA_F-distichus_contig103360.296.1Fucus distichus monoicousmRNAF-distichus_contig103360 221..424 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig103360.296.1 ID=prot_F-distichus_contig103360.296.1|Name=mRNA_F-distichus_contig103360.296.1|organism=Fucus distichus monoicous|type=polypeptide|length=68bp
GFSGAEFKKFKSENDAAAYVKDQHTRAREEPGPPPPGSTTLWFDGGSRGN
PGMSGAGAVIFDDSEKEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf