prot_F-distichus_contig1033.290.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig1033.290.1
Unique Nameprot_F-distichus_contig1033.290.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length454
Homology
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BLAST of mRNA_F-distichus_contig1033.290.1 vs. uniprot
Match: D7FR08_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR08_ECTSI)

HSP 1 Score: 437 bits (1123), Expect = 5.850e-135
Identity = 213/255 (83.53%), Postives = 238/255 (93.33%), Query Frame = 0 
Query:    1 MEKTQIWGPSFSLSRQFEFHDPRNRGMVTVQDFSSVMQQLGVYLSTLETEHLKRLFDRHGDGAIDYTDFCQRILFDQTGMEALAGKINARFVELRRKGVDTRSAFDMYDLSKTGFVSRRDFREAMRKLQIPITEHQLQALCSRFGQLGDPDSVSYEDLFFFAQSSMPDLST-SGVRASVNGSGYDGIRGAGSGPILAKDNVQKWYSGVASGEEKRQFDQIYDRLRSFKHQQDLGIKKSTPPDLIKRDKEDAQVRS 254
            +EKTQ+WGPSFSLSRQFEFHDPRNRGMVT  DFSSVM+QLGVYLS  ETEHLKRLFDR+GDGAIDY DFCQRI+FD+ GMEALAGK+N RF+ELRR+GVDTRSAFDMYDLSKTGFV+RRDFREAMRKLQIP+TEHQLQ+LCSRFG+LGDPDSVSYEDLFFFAQS+MP+LST SG RA+V+GSGYDGIRGAGSGPILA+DNVQ+WYS VAS EEKR FD IY RLRSFKHQQD+G+K++ PPDL+KRD  DAQV+S
Sbjct: 1622 LEKTQLWGPSFSLSRQFEFHDPRNRGMVTENDFSSVMEQLGVYLSGQETEHLKRLFDRYGDGAIDYGDFCQRIMFDRQGMEALAGKVNTRFMELRRRGVDTRSAFDMYDLSKTGFVTRRDFREAMRKLQIPVTEHQLQSLCSRFGRLGDPDSVSYEDLFFFAQSAMPELSTTSGGRAAVDGSGYDGIRGAGSGPILARDNVQRWYSRVASDEEKRLFDSIYGRLRSFKHQQDVGLKRAAPPDLVKRDAMDAQVKS 1876
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BLAST of mRNA_F-distichus_contig1033.290.1 vs. uniprot
Match: A0A836CEX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEX3_9STRA)

HSP 1 Score: 213 bits (543), Expect = 6.970e-57
Identity = 98/162 (60.49%), Postives = 130/162 (80.25%), Query Frame = 0 
Query:    1 MEKTQIWGPSFSLSRQFEFHDPRNRGMVTVQDFSSVMQQLGVYLSTLETEHLKRLFDRHGDGAIDYTDFCQRILFDQTGMEALAGKINARFVELRRKGVDTRSAFDMYDLSKTGFVSRRDFREAMRKLQIPITEHQLQALCSRFGQLGDPDSVSYEDLFFFA 162
            +EKTQ WGP FSLSRQFEFHDP  +G+V  +DF++V++QLGV LS  E + L++LFDR+GD A+DY +FC R+L +    +A+A K+ ARF++LRR GVD R+AF+M+DLS+TGFVSR  FRE +++LQ+P+TEHQ+QAL S F QLG PDS+SYEDL  FA
Sbjct: 1386 LEKTQQWGPQFSLSRQFEFHDPHGKGLVATEDFANVLEQLGVGLSRHELQRLEQLFDRYGDHAMDYMEFCNRVLCESADTQAVARKLCARFLDLRRNGVDIRAAFEMFDLSRTGFVSRTSFREVIKRLQVPVTEHQVQALQSSFCQLGQPDSISYEDLLAFA 1547
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig1033.290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR08_ECTSI5.850e-13583.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CEX3_9STRA6.970e-5760.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 318..343
e-value: 0.32
score: 15.8
coord: 355..376
e-value: 0.9
score: 12.2
IPR002048EF-hand domainPFAMPF13405EF-hand_6coord: 102..128
e-value: 1.7E-5
score: 24.4
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 15..72
e-value: 1.4E-7
score: 31.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 54..79
score: 6.842
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 96..131
score: 10.775
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 17..43
score: 6.145
NoneNo IPR availableGENE3D4.10.1060.10coord: 316..350
e-value: 1.1E-5
score: 26.5
NoneNo IPR availableGENE3D1.10.238.10coord: 10..171
e-value: 9.7E-23
score: 82.5
NoneNo IPR availablePANTHERPTHR20875FAMILY NOT NAMEDcoord: 90..159
coord: 12..73
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 109..121
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 12..159

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 318..343
e-value: 0.32
score: 15.8
coord: 355..376
e-value: 0.9
score: 12.2
IPR002048EF-hand domainPFAMPF13405EF-hand_6coord: 102..128
e-value: 1.7E-5
score: 24.4
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 15..72
e-value: 1.4E-7
score: 31.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 54..79
score: 6.842
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 96..131
score: 10.775
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 17..43
score: 6.145
NoneNo IPR availableGENE3D4.10.1060.10coord: 316..350
e-value: 1.1E-5
score: 26.5
NoneNo IPR availableGENE3D1.10.238.10coord: 10..171
e-value: 9.7E-23
score: 82.5
NoneNo IPR availablePANTHERPTHR20875FAMILY NOT NAMEDcoord: 90..159
coord: 12..73
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 109..121
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 12..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig1033contigF-distichus_contig1033:12096..18781 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig1033.290.1mRNA_F-distichus_contig1033.290.1Fucus distichus monoicousmRNAF-distichus_contig1033 11999..18963 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig1033.290.1 ID=prot_F-distichus_contig1033.290.1|Name=mRNA_F-distichus_contig1033.290.1|organism=Fucus distichus monoicous|type=polypeptide|length=454bp
MEKTQIWGPSFSLSRQFEFHDPRNRGMVTVQDFSSVMQQLGVYLSTLETE
HLKRLFDRHGDGAIDYTDFCQRILFDQTGMEALAGKINARFVELRRKGVD
TRSAFDMYDLSKTGFVSRRDFREAMRKLQIPITEHQLQALCSRFGQLGDP
DSVSYEDLFFFAQSSMPDLSTSGVRASVNGSGYDGIRGAGSGPILAKDNV
QKWYSGVASGEEKRQFDQIYDRLRSFKHQQDLGIKKSTPPDLIKRDKEDA
QVRSCPYEAITPIYKDRYGSPPPSPTHIAGNIVPSNSPSRTGARIWGCHI
PLSRKGSLSISRGMCGQGCWMCPVCFFIENASTSKLCEICQAPNPERKDS
EVLQQCSNCTFANPELSVECQMCGEPLPYGRARRKKKNTGSLRGHQGLPG
WDTGDRSDGDSQKSRRTAHRGRGQVLPRRSRNGRRGRRERRSYSSEGGST
TQD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair