mRNA_F-distichus_contig1033.290.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig1033.290.1 vs. uniprot
Match: D7FR08_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR08_ECTSI) HSP 1 Score: 455 bits (1170), Expect = 7.960e-141 Identity = 224/268 (83.58%), Postives = 250/268 (93.28%), Query Frame = 3
Query: 3 VLEDVASRVRQRVMEKTQIWGPSFSLSRQFEFHDPRNRGMVTVQDFSSVMQQLGVYLSTLETEHLKRLFDRHGDGAIDYTDFCQRILFDQTGMEALAGKINARFVELRRKGVDTRSAFDMYDLSKTGFVSRRDFREAMRKLQIPITEHQLQALCSRFGQLGDPDSVSYEDLFFFAQSSMPDLST-SGVRASVNGSGYDGIRGAGSGPILAKDNVQKWYSGVASGEEKRQFDQIYDRLRSFKHQQDLGIKKSTPPDLIKRDKEDAQVRS 803
VLE+VASRVR RV+EKTQ+WGPSFSLSRQFEFHDPRNRGMVT DFSSVM+QLGVYLS ETEHLKRLFDR+GDGAIDY DFCQRI+FD+ GMEALAGK+N RF+ELRR+GVDTRSAFDMYDLSKTGFV+RRDFREAMRKLQIP+TEHQLQ+LCSRFG+LGDPDSVSYEDLFFFAQS+MP+LST SG RA+V+GSGYDGIRGAGSGPILA+DNVQ+WYS VAS EEKR FD IY RLRSFKHQQD+G+K++ PPDL+KRD DAQV+S
Sbjct: 1609 VLEEVASRVRHRVLEKTQLWGPSFSLSRQFEFHDPRNRGMVTENDFSSVMEQLGVYLSGQETEHLKRLFDRYGDGAIDYGDFCQRIMFDRQGMEALAGKVNTRFMELRRRGVDTRSAFDMYDLSKTGFVTRRDFREAMRKLQIPVTEHQLQSLCSRFGRLGDPDSVSYEDLFFFAQSAMPELSTTSGGRAAVDGSGYDGIRGAGSGPILARDNVQRWYSRVASDEEKRLFDSIYGRLRSFKHQQDVGLKRAAPPDLVKRDAMDAQVKS 1876
BLAST of mRNA_F-distichus_contig1033.290.1 vs. uniprot
Match: A0A836CEX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEX3_9STRA) HSP 1 Score: 231 bits (590), Expect = 1.450e-62 Identity = 109/175 (62.29%), Postives = 142/175 (81.14%), Query Frame = 3
Query: 3 VLEDVASRVRQRVMEKTQIWGPSFSLSRQFEFHDPRNRGMVTVQDFSSVMQQLGVYLSTLETEHLKRLFDRHGDGAIDYTDFCQRILFDQTGMEALAGKINARFVELRRKGVDTRSAFDMYDLSKTGFVSRRDFREAMRKLQIPITEHQLQALCSRFGQLGDPDSVSYEDLFFFA 527
V+ DVASRVRQRV+EKTQ WGP FSLSRQFEFHDP +G+V +DF++V++QLGV LS E + L++LFDR+GD A+DY +FC R+L + +A+A K+ ARF++LRR GVD R+AF+M+DLS+TGFVSR FRE +++LQ+P+TEHQ+QAL S F QLG PDS+SYEDL FA
Sbjct: 1373 VMMDVASRVRQRVLEKTQQWGPQFSLSRQFEFHDPHGKGLVATEDFANVLEQLGVGLSRHELQRLEQLFDRYGDHAMDYMEFCNRVLCESADTQAVARKLCARFLDLRRNGVDIRAAFEMFDLSRTGFVSRTSFREVIKRLQVPVTEHQVQALQSSFCQLGQPDSISYEDLLAFA 1547 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig1033.290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig1033.290.1 >prot_F-distichus_contig1033.290.1 ID=prot_F-distichus_contig1033.290.1|Name=mRNA_F-distichus_contig1033.290.1|organism=Fucus distichus monoicous|type=polypeptide|length=454bp MEKTQIWGPSFSLSRQFEFHDPRNRGMVTVQDFSSVMQQLGVYLSTLETEback to top mRNA from alignment at F-distichus_contig1033:11999..18963- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig1033.290.1 ID=mRNA_F-distichus_contig1033.290.1|Name=mRNA_F-distichus_contig1033.290.1|organism=Fucus distichus monoicous|type=mRNA|length=6965bp|location=Sequence derived from alignment at F-distichus_contig1033:11999..18963- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig1033:11999..18963- >mRNA_F-distichus_contig1033.290.1 ID=mRNA_F-distichus_contig1033.290.1|Name=mRNA_F-distichus_contig1033.290.1|organism=Fucus distichus monoicous|type=CDS|length=2724bp|location=Sequence derived from alignment at F-distichus_contig1033:11999..18963- (Fucus distichus monoicous)back to top |