prot_F-distichus_contig10317.283.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-distichus_contig10317.283.1
Unique Name	prot_F-distichus_contig10317.283.1
Type	polypeptide
Organism	Fucus distichus monoicous (Fucus distichus monoicous)
Sequence length	288

Homology

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BLAST of mRNA_F-distichus_contig10317.283.1 vs. uniprot
Match: A0A6H5KP75_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP75_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 1.100e-23
Identity = 113/272 (41.54%), Postives = 139/272 (51.10%), Query Frame = 0

Query:   21 SAAILIPIVAFVGICCXWRRRKQKQRVGKTP---VSISACGCQDAHERMREQFTLEDGTPTDENGDLEVGDGYESGAASPHDSLVAGSAPKDGLGFLIAASAKGDSSSSRTLELSAEDLKVLSETTAATAPENLSATPAGGVAPPASTGTSDDDDSSWGGRSDAENPGALRRSGSNSSISTLDSTSTASSTWPGSVGFVTPARTDISRGGGSGRPSGRSRGHSSSASGGNMDSFSSGFRTPASLAAATPGRAE--PDTPSPRSGSGSNHGTP 287
            +AAILIP    VG+ C +RRRK+K+   K P   V   + G         + FT  +    + NG+             PH   +  +AP    G   A      ++++ T+  SAE L       A  AP   +A PAG   P A T   DDDDSS   RSD ENPG LRR+GSNSSISTL STSTASSTWP   GFVTPAR +I RG G GR                 +    G++TP +L+AATP R    P+TPSPRS S S HGTP
Sbjct:  599 TAAILIPGFVLVGLFCCYRRRKRKEGELKRPSAAVGAGSGGXXXXXXXXXDSFTSSENN-VEANGEGPTDTLANKPLVKPH--ALQSTAPM--TGGQQAGGEAATAATAATVGDSAEGLPRPPTAAAVMAPG--AAIPAG--TPAAGTAGGDDDDSS---RSDLENPGRLRRTGSNSSISTLGSTSTASSTWPND-GFVTPARNNIPRGAGGGRYG------LGXXXXXXXEGLPPGYKTPGNLSAATPNREMTIPETPSPRSVSSSVHGTP 851

The following BLAST results are available for this feature:

BLAST of mRNA_F-distichus_contig10317.283.1 vs. uniprot

BLAST of mRNA_F-distichus_contig10317.283.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KP75_9PHAE	1.100e-23	41.54	Protein kinase domain-containing protein n=2 Tax=E...	[more]

InterPro

Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..15
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 16..38
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 39..288
None	No IPR available	TMHMM	TMhelix		coord: 15..37

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..15
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 16..38
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 39..288
None	No IPR available	TMHMM	TMhelix		coord: 15..37

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-distichus_contig10317	contig	F-distichus_contig10317:872..2655 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Fucus distichus monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-distichus_contig10317.283.1	mRNA_F-distichus_contig10317.283.1	Fucus distichus monoicous	mRNA	F-distichus_contig10317 872..2655 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-distichus_contig10317.283.1 ID=prot_F-distichus_contig10317.283.1|Name=mRNA_F-distichus_contig10317.283.1|organism=Fucus distichus monoicous|type=polypeptide|length=288bp
FPSSEDSGGGGNGSTMIGIVSAAILIPIVAFVGICCCWRRRKQKQRVGKT
PVSISACGCQDAHERMREQFTLEDGTPTDENGDLEVGDGYESGAASPHDS
LVAGSAPKDGLGFLIAASAKGDSSSSRTLELSAEDLKVLSETTAATAPEN
LSATPAGGVAPPASTGTSDDDDSSWGGRSDAENPGALRRSGSNSSISTLD
STSTASSTWPGSVGFVTPARTDISRGGGSGRPSGRSRGHSSSASGGNMDS
FSSGFRTPASLAAATPGRAEPDTPSPRSGSGSNHGTPH