prot_F-distichus_contig103152.281.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig103152.281.1
Unique Nameprot_F-distichus_contig103152.281.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length115
Homology
BLAST of mRNA_F-distichus_contig103152.281.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 90.5 bits (223), Expect = 8.500e-19
Identity = 44/116 (37.93%), Postives = 72/116 (62.07%), Query Frame = 0
Query:    2 YKCRFVAKGFRQIKGIHYQESSSPTHTKSSLRMALAVMALLDWERRQLDVEMTFLEADVTVELYVDLPDGYR--DSPNQVERLQQAMHGLMHAGLLWAKTFGGELITKGFERSQAD 115
            +K R VA+G+ Q +GI Y E  SP    +S+R  LA+  +LDWE  Q+DV   FL+ D+T E+Y+  P+GYR  ++P+ V +L+++++GL  +   W  T    L + G+++  AD
Sbjct:  896 FKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMKQPEGYRSKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGAD 1011          
BLAST of mRNA_F-distichus_contig103152.281.1 vs. uniprot
Match: A0A151TV63_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TV63_CAJCA)

HSP 1 Score: 86.3 bits (212), Expect = 7.860e-18
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 0
Query:    2 YKCRFVAKGFRQIKGIHYQESSSPTHTKSSLRMALAVMALLDWERRQLDVEMTFLEADVTVELYVDLPDGY--RDSPNQVERLQQAMHGLMHAGLLWAKTFGGELITKGFERSQAD 115
            YK R V KGFRQIKG+ + E  SP    SS+R  L+++A LD E  Q+DV+ TFL  ++  E+Y+  PDG+      + V RL+++++GL      W K F   +  +G++++ +D
Sbjct:  108 YKARLVVKGFRQIKGVDFNEIFSPVVKMSSIRTVLSLIATLDLEVEQMDVKTTFLHGNLEEEIYMKQPDGFLVEGKEDYVCRLRKSLYGLKQVPRQWYKKFESFMCEQGYKKTTSD 223          
BLAST of mRNA_F-distichus_contig103152.281.1 vs. uniprot
Match: A0A2N9FLV5_FAGSY (Uncharacterized protein n=3 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FLV5_FAGSY)

HSP 1 Score: 87.4 bits (215), Expect = 1.020e-17
Identity = 45/116 (38.79%), Postives = 65/116 (56.03%), Query Frame = 0
Query:    2 YKCRFVAKGFRQIKGIHYQESSSPTHTKSSLRMALAVMALLDWERRQLDVEMTFLEADVTVELYVDLPDGYRDS--PNQVERLQQAMHGLMHAGLLWAKTFGGELITKGFERSQAD 115
            +K R VA+G+ Q  GI Y E+ SP    +++R  L V  +  W  RQ+DV   FL   +T ++Y+  P G++D   PN V RL++A++GL  A   W  T    LI  GF  S+AD
Sbjct:  959 FKARLVARGYHQRPGIDYTETFSPVVKPATIRSVLTVAVMQGWTLRQMDVNNAFLHGQITEDVYMSQPPGFKDQSKPNHVCRLRKAIYGLKQAPRAWYSTLKDALIHLGFHNSKAD 1074          
BLAST of mRNA_F-distichus_contig103152.281.1 vs. uniprot
Match: UPI00067B46BF (retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Amyelois transitella TaxID=680683 RepID=UPI00067B46BF)

HSP 1 Score: 87.4 bits (215), Expect = 1.030e-17
Identity = 45/114 (39.47%), Postives = 66/114 (57.89%), Query Frame = 0
Query:    2 YKCRFVAKGFRQIKGIHYQESSSPTHTKSSLRMALAVMALLDWERRQLDVEMTFLEADVTVELYVDLPDGYRDSPNQVERLQQAMHGLMHAGLLWAKTFGGELITKGFERSQAD 115
            YK R VAKGF+Q KGI Y+++ SP    +++R  L+V A       Q DV   FL   V  E+Y+  PDG+ D  ++V RL+++++GL  A   W   F   L+ KGF +S +D
Sbjct:  916 YKARLVAKGFKQRKGIDYEQTYSPVARMATIRALLSVSAKEKLHLMQFDVSTAFLNGKVEEEIYMSQPDGFSDGTSKVCRLKRSLYGLKQAPRCWNSCFAEILLEKGFVQSSSD 1029          
BLAST of mRNA_F-distichus_contig103152.281.1 vs. uniprot
Match: UPI0020246435 (hypothetical protein n=2 Tax=Proteus mirabilis TaxID=584 RepID=UPI0020246435)

HSP 1 Score: 86.7 bits (213), Expect = 1.720e-17
Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = 0
Query:    1 MYKCRFVAKGFRQIKGIHYQESSSPTHTKSSLRMALAVMALLDWERRQLDVEMTFLEADVTVELYVDLPDGYRD--SPNQVERLQQAMHGLMHAGLLWAKTFGGELITKGF 109
            +YK R VAKGFRQ++GI Y E+ SP     S+R+ LA+ A  D+E  Q+DV+  FL   +  ELY+  P+G+ D    N+V +LQ++++GL+ A   W K F   +   GF
Sbjct:   70 VYKARLVAKGFRQVQGIDYDETFSPVAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLEEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWNKRFDSVIKAYGF 180          
BLAST of mRNA_F-distichus_contig103152.281.1 vs. uniprot
Match: UPI001F50BB81 (hypothetical protein n=1 Tax=Ligilactobacillus salivarius TaxID=1624 RepID=UPI001F50BB81)

HSP 1 Score: 85.1 bits (209), Expect = 2.070e-17
Identity = 45/111 (40.54%), Postives = 69/111 (62.16%), Query Frame = 0
Query:    1 MYKCRFVAKGFRQIKGIHYQESSSPTHTKSSLRMALAVMALLDWERRQLDVEMTFLEADVTVELYVDLPDGYRD--SPNQVERLQQAMHGLMHAGLLWAKTFGGELITKGF 109
            +YK R VAKGFRQI+G+ Y+E+ SP     S+R+ LA+ A  D+E  Q+DV+  FL  ++  ELY+  P+G+ D    N+V +LQ++++GL+ A   W   F   +   GF
Sbjct:   37 VYKARLVAKGFRQIQGVDYEETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGNLKEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWNIRFNEVIKAFGF 147          
BLAST of mRNA_F-distichus_contig103152.281.1 vs. uniprot
Match: G8DCY4_PHAVU (Putative gag/pol polyprotein n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=G8DCY4_PHAVU)

HSP 1 Score: 86.3 bits (212), Expect = 2.610e-17
Identity = 45/116 (38.79%), Postives = 69/116 (59.48%), Query Frame = 0
Query:    2 YKCRFVAKGFRQIKGIHYQESSSPTHTKSSLRMALAVMALLDWERRQLDVEMTFLEADVTVELYVDLPDGY--RDSPNQVERLQQAMHGLMHAGLLWAKTFGGELITKGFERSQAD 115
            YK R V KGFRQ KGI + E  SP    SS+R+ L++ A LD E  Q+DV+  FL  D+  E+Y+  PDG+      + V RL+++++GL  A   W K F   +  +G++++ +D
Sbjct:  818 YKARLVVKGFRQRKGIDFNEIFSPVVKMSSIRIVLSLAATLDLEVEQMDVKTAFLHGDLEEEIYMKQPDGFLVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESVMCEQGYKKTTSD 933          
BLAST of mRNA_F-distichus_contig103152.281.1 vs. uniprot
Match: A0A151UCJ4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151UCJ4_CAJCA)

HSP 1 Score: 85.5 bits (210), Expect = 2.790e-17
Identity = 44/116 (37.93%), Postives = 69/116 (59.48%), Query Frame = 0
Query:    2 YKCRFVAKGFRQIKGIHYQESSSPTHTKSSLRMALAVMALLDWERRQLDVEMTFLEADVTVELYVDLPDGY--RDSPNQVERLQQAMHGLMHAGLLWAKTFGGELITKGFERSQAD 115
            YK R V KGFRQ KG+ + E  SP    +S+R  L++ A LD E  Q+DV+ TFL  D+  E+Y+  PDG+      + V RL+++++GL  A   W K F   +  +G++++ +D
Sbjct:   50 YKARLVVKGFRQRKGVDFNEIFSPVVRMTSIRTVLSLAATLDLEVEQMDVKTTFLHGDLEEEIYMKQPDGFLIEGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMCEQGYKKTTSD 165          
BLAST of mRNA_F-distichus_contig103152.281.1 vs. uniprot
Match: A0A6A2XDJ5_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2XDJ5_HIBSY)

HSP 1 Score: 85.9 bits (211), Expect = 3.540e-17
Identity = 45/116 (38.79%), Postives = 71/116 (61.21%), Query Frame = 0
Query:    2 YKCRFVAKGFRQIKGIHYQESSSPTHTKSSLRMALAVMALLDWERRQLDVEMTFLEADVTVELYVDLPDGYR--DSPNQVERLQQAMHGLMHAGLLWAKTFGGELITKGFERSQAD 115
            YK R VAKG+ Q +G+ Y E  SP    SS+R+ LA++ALLD E  Q+DV+  FL  D+  E+Y+  PDG++  +    V +L+++++GL  +   W K F   +I + + RS+ D
Sbjct:  845 YKARLVAKGYAQTEGVDYNEVFSPVVKHSSIRILLALVALLDLELVQMDVKTAFLHGDMDEEIYMTQPDGFKVAEKEEMVCKLEKSLYGLKQSPRQWYKRFDKFMIGQKYTRSKYD 960          
BLAST of mRNA_F-distichus_contig103152.281.1 vs. uniprot
Match: A0A2Z6NTG1_TRISU (Integrase catalytic domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NTG1_TRISU)

HSP 1 Score: 85.5 bits (210), Expect = 4.840e-17
Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = 0
Query:    3 KCRFVAKGFRQIKGIHYQESSSPTHTKSSLRMALAVMALLDWERRQLDVEMTFLEADVTVELYVDLPDGY--RDSPNQVERLQQAMHGLMHAGLLWAKTFGGELITKGFERSQAD 115
            K R V KGFRQ KG+ + E  SP    SS+R  LA+ A LD E  Q+DV+ TFL  D+  E+Y+  PDG+  +   + V RL+++++GL  A   W K F   +  +G++++ +D
Sbjct:  635 KARLVVKGFRQRKGVDFNEIFSPVVKMSSIRTVLALAATLDLEVEQMDVKTTFLHGDLEEEIYMKQPDGFLVKGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMSEQGYKKTTSD 749          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig103152.281.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9IUY0_PARCT8.500e-1937.93Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A151TV63_CAJCA7.860e-1837.93Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9FLV5_FAGSY1.020e-1738.79Uncharacterized protein n=3 Tax=Fagus sylvatica Ta... [more]
UPI00067B46BF1.030e-1739.47retrovirus-related Pol polyprotein from transposon... [more]
UPI00202464351.720e-1741.44hypothetical protein n=2 Tax=Proteus mirabilis Tax... [more]
UPI001F50BB812.070e-1740.54hypothetical protein n=1 Tax=Ligilactobacillus sal... [more]
G8DCY4_PHAVU2.610e-1738.79Putative gag/pol polyprotein n=1 Tax=Phaseolus vul... [more]
A0A151UCJ4_CAJCA2.790e-1737.93Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A2XDJ5_HIBSY3.540e-1738.79Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]
A0A2Z6NTG1_TRISU4.840e-1739.13Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..114
e-value: 2.3E-25
score: 89.7
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..75
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 2..75

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..114
e-value: 2.3E-25
score: 89.7
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..75
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 2..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig103152contigF-distichus_contig103152:64..408 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig103152.281.1mRNA_F-distichus_contig103152.281.1Fucus distichus monoicousmRNAF-distichus_contig103152 64..408 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig103152.281.1 ID=prot_F-distichus_contig103152.281.1|Name=mRNA_F-distichus_contig103152.281.1|organism=Fucus distichus monoicous|type=polypeptide|length=115bp
MYKCRFVAKGFRQIKGIHYQESSSPTHTKSSLRMALAVMALLDWERRQLD
VEMTFLEADVTVELYVDLPDGYRDSPNQVERLQQAMHGLMHAGLLWAKTF
GGELITKGFERSQAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like