prot_F-distichus_contig103044.269.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-distichus_contig103044.269.1
Unique Name	prot_F-distichus_contig103044.269.1
Type	polypeptide
Organism	Fucus distichus monoicous (Fucus distichus monoicous)
Sequence length	415

Homology

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BLAST of mRNA_F-distichus_contig103044.269.1 vs. uniprot
Match: D8LNZ7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ7_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 1.720e-72
Identity = 192/457 (42.01%), Postives = 263/457 (57.55%), Query Frame = 0

Query:    1 MPGATDM-AGVGLVASGVLRPLDKENF-NTPSAAGRTPDKRPK-----------PSASPGFRIFQDETFITCASTNEKLKPSPPKLLKALKHAETEAAKYKEELRETRASLQARHERVQELKTAAASINQQHTALLKKHEEAIKELGLVRA-----------------------MAENSELLREERASLEAKLAKREAALSFVKKEVXXXXXXXXXXXXXXXXXXXXXXIASQESNGDPNARREGIAAEPERRWYLEKAALDAQIKELEEQLTASQRRCSVVVAERAVLAEEATRRGKEHSAKVAALQNERNSLQRRTSADLGDWQRRHREALGAKKAAEGQLERLVEASKSIARFAEKQAVLEASLQEACELLSQGVPTENPSVGSGEGPGSAERVVEGVIEHILGRVFEATRT------EQTADDGWRDRETEHSLMEAELDLRGKAVEKLAADV 415
            MPGA D  +G GL + GVL+ LDKEN  NTP+   RTPD+R K            +A  GF++FQ +   +  ++    + S  +L   L  AE+E A+ KEE R+ R +L  R+E V++LK + A+  Q++TALL+ HEEA KEL L+R                        +  N+ELLREER SL+ +LAKR+AA+S +K ++                       A+  S     A+           W L+K AL+A+I ELE Q  +S RRC  +VAER +LAEE+ RR KEH++ VA+L++E   L RRT+ADLGDW++R+R+ +GAK+A EGQLERLV AS+S+ R  EK AVLEASLQEA  LLSQ V  E    G       A RVVEGV+EH+LGRVF+AT T      E   ++G ++RE +  L +   D  G+ +EKL AD+
Sbjct:    1 MPGARDAGSGGGLFSPGVLQQLDKENVVNTPA---RTPDRRRKLGSAIRGTSSAAAAGVGFKVFQQQGEASTRTSVAGQEAS--QLATDLSRAESELARLKEEARQARRALDERNEMVEQLKASKANTKQRYTALLQSHEEANKELELLRTQKLDSSGDSGSGIVEQLRATVENLETNNELLREERGSLQTRLAKRDAAVSAMKADLAAATQRDDALRQKADRLREELDAAAAASKAGAQAQ-----------WDLDKEALEARIGELETQAASSGRRCVELVAERDLLAEESARREKEHASTVASLRSEMQGLHRRTTADLGDWRQRYRQEVGAKRALEGQLERLVAASESVTRVIEKHAVLEASLQEAYGLLSQAVLAEER--GXXXXXXXAARVVEGVLEHLLGRVFQATATSGDEEEEGEDEEGRKEREADRRLSKEASDNLGEELEKLTADM 439

The following BLAST results are available for this feature:

BLAST of mRNA_F-distichus_contig103044.269.1 vs. uniprot

BLAST of mRNA_F-distichus_contig103044.269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LNZ7_ECTSI	1.720e-72	42.01	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 136..202
None	No IPR available	COILS	Coil	Coil	coord: 77..108
None	No IPR available	COILS	Coil	Coil	coord: 254..281
None	No IPR available	COILS	Coil	Coil	coord: 215..249

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 136..202
None	No IPR available	COILS	Coil	Coil	coord: 77..108
None	No IPR available	COILS	Coil	Coil	coord: 254..281
None	No IPR available	COILS	Coil	Coil	coord: 215..249

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-distichus_contig103044	contig	F-distichus_contig103044:386..1630 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Fucus distichus monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-distichus_contig103044.269.1	mRNA_F-distichus_contig103044.269.1	Fucus distichus monoicous	mRNA	F-distichus_contig103044 386..1630 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-distichus_contig103044.269.1 ID=prot_F-distichus_contig103044.269.1|Name=mRNA_F-distichus_contig103044.269.1|organism=Fucus distichus monoicous|type=polypeptide|length=415bp
MPGATDMAGVGLVASGVLRPLDKENFNTPSAAGRTPDKRPKPSASPGFRI
FQDETFITCASTNEKLKPSPPKLLKALKHAETEAAKYKEELRETRASLQA
RHERVQELKTAAASINQQHTALLKKHEEAIKELGLVRAMAENSELLREER
ASLEAKLAKREAALSFVKKEVAAVTERESTIREELERVRRELEIASQESN
GDPNARREGIAAEPERRWYLEKAALDAQIKELEEQLTASQRRCSVVVAER
AVLAEEATRRGKEHSAKVAALQNERNSLQRRTSADLGDWQRRHREALGAK
KAAEGQLERLVEASKSIARFAEKQAVLEASLQEACELLSQGVPTENPSVG
SGEGPGSAERVVEGVIEHILGRVFEATRTEQTADDGWRDRETEHSLMEAE
LDLRGKAVEKLAADV