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Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR008615 | FNIP | PFAM | PF05725 | FNIP | coord: 176..219
e-value: 9.0E-9
score: 35.4
coord: 254..284
e-value: 9.1E-5
score: 22.6
coord: 375..418
e-value: 2.3E-7
score: 30.9
coord: 531..572
e-value: 1.6E-6
score: 28.2
coord: 419..460
e-value: 4.3E-5
score: 23.6
coord: 487..528
e-value: 2.4E-6
score: 27.6
coord: 287..328
e-value: 1.1E-5
score: 25.5
coord: 331..373
e-value: 1.9E-5
score: 24.7 |
| IPR032675 | Leucine-rich repeat domain superfamily | GENE3D | 3.80.10.10 | | coord: 253..469
e-value: 1.5E-7
score: 32.2 |
| None | No IPR available | PANTHER | PTHR32134:SF86 | | coord: 571..663
coord: 129..305 |
| None | No IPR available | PANTHER | PTHR32134 | UNCHARACTERIZED | coord: 571..663
coord: 451..571
coord: 300..402
coord: 129..305
coord: 482..607 |
| None | No IPR available | PANTHER | PTHR32134 | UNCHARACTERIZED | coord: 343..474 |
| None | No IPR available | PANTHER | PTHR32134:SF86 | | coord: 343..474
coord: 451..571
coord: 300..402
coord: 482..607 |
| None | No IPR available | SUPERFAMILY | 52058 | L domain-like | coord: 385..646 |
| None | No IPR available | SUPERFAMILY | 52058 | L domain-like | coord: 156..487 |
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR008615 | FNIP | PFAM | PF05725 | FNIP | coord: 176..219
e-value: 9.0E-9
score: 35.4
coord: 254..284
e-value: 9.1E-5
score: 22.6
coord: 375..418
e-value: 2.3E-7
score: 30.9
coord: 531..572
e-value: 1.6E-6
score: 28.2
coord: 419..460
e-value: 4.3E-5
score: 23.6
coord: 487..528
e-value: 2.4E-6
score: 27.6
coord: 287..328
e-value: 1.1E-5
score: 25.5
coord: 331..373
e-value: 1.9E-5
score: 24.7 |
| IPR032675 | Leucine-rich repeat domain superfamily | GENE3D | 3.80.10.10 | | coord: 253..469
e-value: 1.5E-7
score: 32.2 |
| None | No IPR available | PANTHER | PTHR32134:SF86 | | coord: 571..663
coord: 129..305 |
| None | No IPR available | PANTHER | PTHR32134 | UNCHARACTERIZED | coord: 571..663
coord: 451..571
coord: 300..402
coord: 129..305
coord: 482..607 |
| None | No IPR available | PANTHER | PTHR32134 | UNCHARACTERIZED | coord: 343..474 |
| None | No IPR available | PANTHER | PTHR32134:SF86 | | coord: 343..474
coord: 451..571
coord: 300..402
coord: 482..607 |
| None | No IPR available | SUPERFAMILY | 52058 | L domain-like | coord: 385..646 |
| None | No IPR available | SUPERFAMILY | 52058 | L domain-like | coord: 156..487 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_F-distichus_contig10290.256.1 ID=prot_F-distichus_contig10290.256.1|Name=mRNA_F-distichus_contig10290.256.1|organism=Fucus distichus monoicous|type=polypeptide|length=663bp
MVLNDAYNGQLQHQWYVSTKQIPLVSVELCVTCRRLETSCIVVTTDTPLH
LWRRRKVGETSEDRGHSRLPTLRISELIWKRSVAELPKGSGQFEVSPTNM
VARSCNDRDRLDAAWSSASFRHLHRLSLMPVYNEAINDVVWPAPLLQLTL
GGCFNFSVESVVWPVSLQYLKFGDAFNQPIAQVVWPPALRQVVLGRDFNM
PIESVVWPNSLQHLAFGYKFNQPIASVVWPASLQTLTLGEHFRQSSVDNV
LWSSSLQQIIFGKDFNQPIIEVVWPPLLQWLSFGHNFNQPIDGVVWSAAL
QQLIFGHDFNQSIVDVVWPPSLQLLSFGHNFNQPIDHLVWTATIQKLTFG
YDFNQGIDKMAWPSGLQQIVFGKTFNQSITGIVWPDSIKELSFGWDFNQS
IDNVMWPAALQQLMFGYDFNQPIADVVWPPYLQGLRFGHNFNQPIDHLVW
PATFQKLSLGWCFDKPLCSVTWPTSPRLIALTFGYNFNQAIEKMTWPLGL
QHLVFGKMFNQSIAGIVLQDSIKYLTFGWDFNQPIADVKWPSSLRHLEFG
HDFNQPIDNVAWPAELRLVRFGHDFDQSIVDVKWPPTLEQLTFGHDFNQP
PTNITKPPLDEMNWPVSLKSLIFGRGFNQPVDGEKWPVSLVHLYLGPNFG
HPIDCVRWPASLK back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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