prot_F-distichus_contig10288.253.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig10288.253.1
Unique Nameprot_F-distichus_contig10288.253.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length191
Homology
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BLAST of mRNA_F-distichus_contig10288.253.1 vs. uniprot
Match: A0A6H5LJ83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ83_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 2.190e-46
Identity = 90/140 (64.29%), Postives = 105/140 (75.00%), Query Frame = 0 
Query:    1 MQHHGRGKRKVKAKVLYNILERVSSEDELKYAHLGLELFKKQEIKLSKKAGSLFLKACCKAGSPQAAVHALEEAEKYGLHEESVVSAHRFNHLLSQLYKAGDEDSFRRAVAEARSRPEMLNRRSHFLVDSFEAESRARGE 140
            MQ+H RG RKVKA VL  ILERV+S ++LKYA LGL++FK Q I L KK  +LF+KACCKAGSPQ AV  L EA KYGL  E VVSAHRFN+LLSQLY AGD ++F RAV+EA  R + LN RSH L+  FE E RA+ E
Sbjct:   98 MQYHARGTRKVKASVLNRILERVTSAEDLKYACLGLKIFKTQGIDLEKKTATLFVKACCKAGSPQMAVDVLGEAAKYGLDGEGVVSAHRFNYLLSQLYIAGDSETFTRAVSEAEHRQQSLNARSHTLISKFEGEMRAKEE 237
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BLAST of mRNA_F-distichus_contig10288.253.1 vs. uniprot
Match: D7FS35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS35_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 5.630e-17
Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = 0 
Query:   67 AVHALEEAEKYGLHEESVVSAHRFNHLLSQLYKAGDEDSFRRAVAEARSRPEMLNRRSHFLVDSFEAESRARGE 140
            AV  L EA KYGL  E VVSAHRFN+LLSQLY AGD ++F RAV+EA  R + LN RSH L+  FE E RA+ E
Sbjct:    2 AVDVLGEAAKYGLDGEGVVSAHRFNYLLSQLYIAGDSETFTRAVSEAEHRQQSLNARSHTLIAKFEGEMRAKEE 75
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10288.253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LJ83_9PHAE2.190e-4664.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS35_ECTSI5.630e-1762.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 131..190
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 12..190
e-value: 7.5E-7
score: 30.8

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 131..190
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 12..190
e-value: 7.5E-7
score: 30.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10288contigF-distichus_contig10288:4166..5721 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10288.253.1mRNA_F-distichus_contig10288.253.1Fucus distichus monoicousmRNAF-distichus_contig10288 3470..5867 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig10288.253.1 ID=prot_F-distichus_contig10288.253.1|Name=mRNA_F-distichus_contig10288.253.1|organism=Fucus distichus monoicous|type=polypeptide|length=191bp
MQHHGRGKRKVKAKVLYNILERVSSEDELKYAHLGLELFKKQEIKLSKKA
GSLFLKACCKAGSPQAAVHALEEAEKYGLHEESVVSAHRFNHLLSQLYKA
GDEDSFRRAVAEARSRPEMLNRRSHFLVDSFEAESRARGEEERKRKEAEE
EEEQKARLEAEEKAVVEAEEKSRVEVEEAKAKQEAEEAKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf