prot_F-distichus_contig102634.229.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig102634.229.1
Unique Nameprot_F-distichus_contig102634.229.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length54
Homology
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BLAST of mRNA_F-distichus_contig102634.229.1 vs. uniprot
Match: UPI000C7950E8 (proteasome activator complex subunit 4B-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C7950E8)

HSP 1 Score: 72.4 bits (176), Expect = 1.620e-13
Identity = 35/53 (66.04%), Postives = 41/53 (77.36%), Query Frame = 0 
Query:    1 DETHLFILQLLSEVIGVKNVGVFRSRGRDILPWVEDICSVLDCTLSLGLKDEY 53
            DE   F LQLL+EVI VKNV ++RSRG DILP++  ICSVLD TL+L  KDEY
Sbjct:  167 DEELQFNLQLLAEVISVKNVQIYRSRGSDILPYIPQICSVLDVTLNLTQKDEY 219
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102634.229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI000C7950E81.620e-1366.04proteasome activator complex subunit 4B-like n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig102634contigF-distichus_contig102634:138..299 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig102634.229.1mRNA_F-distichus_contig102634.229.1Fucus distichus monoicousmRNAF-distichus_contig102634 138..299 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig102634.229.1 ID=prot_F-distichus_contig102634.229.1|Name=mRNA_F-distichus_contig102634.229.1|organism=Fucus distichus monoicous|type=polypeptide|length=54bp
DETHLFILQLLSEVIGVKNVGVFRSRGRDILPWVEDICSVLDCTLSLGLK
DEY*
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