prot_F-distichus_contig102581.224.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-distichus_contig102581.224.1
Unique Name	prot_F-distichus_contig102581.224.1
Type	polypeptide
Organism	Fucus distichus monoicous (Fucus distichus monoicous)
Sequence length	56

Homology

[Close]

BLAST of mRNA_F-distichus_contig102581.224.1 vs. uniprot
Match: A0A6H5K5F4_9PHAE (AAA_16 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5F4_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 9.890e-25
Identity = 46/55 (83.64%), Postives = 49/55 (89.09%), Query Frame = 0

Query:    1 PPLLVTGPPCCGKTGVIRAVLDHRGCPYVYVNCAEVVRRRGLLETVVEQVAGGSR 55
            PPLLVTGPPC GKT V+RAVLDHRGC Y YVNCAEVV+RR LLE +VEQVAGGSR
Sbjct:   91 PPLLVTGPPCTGKTSVVRAVLDHRGCSYAYVNCAEVVQRRDLLEALVEQVAGGSR 145

[Close]

BLAST of mRNA_F-distichus_contig102581.224.1 vs. uniprot
Match: D7FZ80_ECTSI (Putative Mn/Fe superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ80_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 8.790e-24
Identity = 46/55 (83.64%), Postives = 49/55 (89.09%), Query Frame = 0

Query:    1 PPLLVTGPPCCGKTGVIRAVLDHRGCPYVYVNCAEVVRRRGLLETVVEQVAGGSR 55
            PPLLVTGPPC GKT V+RAVLDHRGC Y YVNCAEVV+RR LLE +VEQVAGGSR
Sbjct:  135 PPLLVTGPPCTGKTSVVRAVLDHRGCSYAYVNCAEVVQRRDLLEVLVEQVAGGSR 189

[Close]

BLAST of mRNA_F-distichus_contig102581.224.1 vs. uniprot
Match: A0A836CAU5_9STRA (Origin recognition complex subunit 5 C-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAU5_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.520e-9
Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 0

Query:    2 PLLVTGPPCCGKTGVIRAVLDHRGCPYVYVNCAEVVRRRGLLETVVEQVAGGSR 55
            P++V GPPC GK+G IR VL+   CPY  V+C + +  R L++ VVEQ+    R
Sbjct:  117 PIIVQGPPCTGKSGAIRDVLEESSCPYTLVDCKQALSLRQLMQAVVEQLVSSKR 170

The following BLAST results are available for this feature:

BLAST of mRNA_F-distichus_contig102581.224.1 vs. uniprot

BLAST of mRNA_F-distichus_contig102581.224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5K5F4_9PHAE	9.890e-25	83.64	AAA_16 domain-containing protein n=1 Tax=Ectocarpu...	[more]
D7FZ80_ECTSI	8.790e-24	83.64	Putative Mn/Fe superoxide dismutase n=1 Tax=Ectoca...	[more]
A0A836CAU5_9STRA	1.520e-9	46.30	Origin recognition complex subunit 5 C-terminus-do...	[more]

InterPro

Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 1..54 e-value: 9.8E-7 score: 30.5
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 3..38 e-value: 1.4E-5 score: 25.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..39

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 1..54 e-value: 9.8E-7 score: 30.5
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 3..38 e-value: 1.4E-5 score: 25.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..39

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-distichus_contig102581	contig	F-distichus_contig102581:204..371 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Fucus distichus monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-distichus_contig102581.224.1	mRNA_F-distichus_contig102581.224.1	Fucus distichus monoicous	mRNA	F-distichus_contig102581 204..371 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-distichus_contig102581.224.1 ID=prot_F-distichus_contig102581.224.1|Name=mRNA_F-distichus_contig102581.224.1|organism=Fucus distichus monoicous|type=polypeptide|length=56bp
PPLLVTGPPCCGKTGVIRAVLDHRGCPYVYVNCAEVVRRRGLLETVVEQV
AGGSR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003959	ATPase_AAA_core
IPR027417	P-loop_NTPase