prot_F-distichus_contig10225.194.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig10225.194.1
Unique Nameprot_F-distichus_contig10225.194.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length681
Homology
BLAST of mRNA_F-distichus_contig10225.194.1 vs. uniprot
Match: D8LBX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX5_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 6.770e-65
Identity = 214/596 (35.91%), Postives = 275/596 (46.14%), Query Frame = 0
Query:  105 GNEPGANDKAPLLSIQIGGVNGDLPDVQWSVQIQ--KVLKAEDSGRINVKVKGVSLSVSLDPGAGASSLLPLQRPPSAXXXXXXXXXXTPQSSPFYREDDTDSLSRASSSPISVTPAGLVRETSGLFDDDSSGGSAGRGVGQPQECDARDVGLSAVVEGARGGLGDTGAEVNDVTFRH-------------------SQKVARLILICFASGTLSSALTKGTDKLRRRLKGPKGATTFSPQVTPLCSPVHHDRSDGFTTPTR-----------------------PTPSQ----SPLYPEAASKAVKPPSEFVPVRD----SFIGVRKNDGGSRE-------------AGGERSRASPGVSDSSEDDKLACS-IGYGSA-GLLKVTECRCSVGTIDIQIDGSKFDGIYNLVAKGLGDTIRDAVXXXXEKAFTQGVERLVARINDRAAQLWCGIAPEPKQKPAKVVCSAIRAQGIGKGRIEPFVKLRLFDKDGSQVAKRSTAALTSIAGAADAS------------------------DRGGSSRNPCWIGLDNDLTLDLPEEGAQGYSLFFEVRQSGTLASNLIGSTRRSTLREIE 609
            G E  A    P LSI +G V+  LPDV WSVQ+Q  + L+  DSG INV ++GVSLS+SLDPGAG  SL    R PS   XXXXXXXX                   S       P         LF   ++   + R V      +  D G  +V E   G                                   S K ++L        ++S+AL+KGT K++RRLK                                                       P+ S+    +P  P AA+ A   P      R     S +G    DGGS               A   R R S    D+ E  +L  S I  GSA G LKVT C C VG+I I++DGSK DGIYN +AKGLGDTIRDAV    EKAF + + +LV  INDR A++W G AP  K+KPA++VC+A+RAQG+ KG+ + +VK+RL  KDG+Q+ KRSTAA+ ++A +A  S                             +RNPCW+GLDNDL+++LPEE     SL FEV  SGTLA+ L+GSTRR T+ EIE
Sbjct:  625 GGEREAXXXXPYLSITVGNVSCFLPDVNWSVQMQQKRFLRVGDSGYINVWLEGVSLSLSLDPGAGVDSLFGSSRRPSQTPXXXXXXXXXXXXXXXXXXXXXXXXXGTSGGDNQGAPPRP------LFPFVATSSQSPRSVSAEPSAEGIDGG--SVAERGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKWSKL-------NSMSTALSKGTGKIKRRLKATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPSTSRERAVTPPLPSAATTAATTPEALPSSRSVPHLSILGDNDADGGSGSLVFATAAEFSPLAAAAARRRGSGLEGDAREAGELPPSGISGGSADGFLKVTACSCKVGSIRIEVDGSKHDGIYNFLAKGLGDTIRDAVREAVEKAFAEEIGKLVEGINDRIAEIWSGSAPVSKKKPARLVCAAVRAQGLPKGKTDLYVKVRLIKKDGTQLEKRSTAAVGAVATSAAMSIPXXXXXXXXXXXXXXXXXXXXXXXXXAPARNPCWVGLDNDLSMNLPEEDPGRLSLVFEVWHSGTLANALVGSTRRVTMSEIE 1205          
BLAST of mRNA_F-distichus_contig10225.194.1 vs. uniprot
Match: A0A6H5JK16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK16_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 1.450e-63
Identity = 209/589 (35.48%), Postives = 274/589 (46.52%), Query Frame = 0
Query:  117 LSIQIGGVNGDLPDVQWSVQIQ--KVLKAEDSGRINVKVKGVSLSVSLDPGAGASSLLPLQRPPSAXXXXXXXXXXTPQSSPFYREDDTDSLSRASSSPISVTPAGLVRETSGLFDDDSSGGSAGRGVGQPQECDARDVGLSAVVEGARGGLGDTGAEVNDVTFRHSQKVARLILICFASG--------------TLSSALTKGTDKLRRRLKGPK---------------------------GATTFSPQVTPLCSPV---HHDRSDGFTTPTRPTPSQ----SPLYPEAASKAVKPP-----SEFVPVRDSFIGVRKNDGGSRE--------------AGGERSRASPGVSDSSEDDKLACSIGYGSAG---LLKVTECRCSVGTIDIQIDGSKFDGIYNLVAKGLGDTIRDAVXXXXEKAFTQGVERLVARINDRAAQLWCGIAPEPKQKPAKVVCSAIRAQGIGKGRIEPFVKLRLFDKDGSQVAKRSTAALTSIAGAADAS------------------------DRGGSSRNPCWIGLDNDLTLDLPEEGAQGYSLFFEVRQSGTLASNLIGSTRRSTLREIE 609
            LSI +G V+  LP V WSVQ Q  + L+  DSG INV+++GVSLS+SLDPGAG  SL    R PS   XXXXXX   P+  P          S   +      P         L    ++   A R V      +  D G  A     RGG                                            ++S+AL+KGT K++RR K                                T+F P  +    P      D+SD F++ + P+ S+    +P  P AA+ A   P     S  VP R S +G    DGGS                A   R R S    D  E  ++  S G  + G    LKVT C C VG+I I +DGSK DGIYN +AKGLGDTIRDAV    EKAF + + +LV  INDR A++W G  P  K+   +VVC+A+RAQ + KG+ + +VK+RL  +DG+Q+ KRSTAA+ ++A +A  S                             +RNPCW+GLDNDL+++LPEE   G SL FEV  SGTLA+ L+GSTRR T+ EIE
Sbjct:  615 LSITLGNVSCFLPKVNWSVQTQQKRFLRVGDSGYINVRLEGVSLSLSLDPGAGVCSLFGSSRRPSQTPXXXXXXPVAPRHLPGTSAAAPVGTSGGDNXXXXXRP---------LLPFVATSSQAPRSVSAEPSAEGTDGGSVA----ERGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKWSTLKSMSTALSKGTGKIKRRWKATXXXXXXXXXXXXXXXXXXXLQRTGHHQPAPTSFQPASSFFHPPSPIDSSDKSDAFSSSSVPSTSRGRAITPTLPSAATTAAPTPEALPSSRSVP-RLSSLGDNDADGGSGSLVFATAAEFSPLAAAAAARRRGSGLEGDDGEAGEVTPS-GISAGGTDEFLKVTACSCKVGSIRIDVDGSKHDGIYNFLAKGLGDTIRDAVREAVEKAFAEEIGKLVEGINDRIAEIWSGSPPVSKK--FRVVCAAVRAQDLPKGKTDLYVKVRLIKQDGTQLEKRSTAAVGAVATSAAMSIPXXXXXXXXXXXXXXXXXXXXXXXXXAPARNPCWVGLDNDLSMNLPEEDPDGMSLVFEVWHSGTLANALVGSTRRVTMSEIE 1186          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10225.194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBX5_ECTSI6.770e-6535.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK16_9PHAE1.450e-6335.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 284..302
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 303..680
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..283

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 284..302
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 303..680
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10225contigF-distichus_contig10225:5479..10626 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10225.194.1mRNA_F-distichus_contig10225.194.1Fucus distichus monoicousmRNAF-distichus_contig10225 4051..10626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig10225.194.1 ID=prot_F-distichus_contig10225.194.1|Name=mRNA_F-distichus_contig10225.194.1|organism=Fucus distichus monoicous|type=polypeptide|length=681bp
DGSIPRSQTPSGTNVVGEHFPKEAANSTPKVINSGRDAWKKIAAVAAQGV
GEASKGVPWFKKVAARGVGRGSSNRRQLRGQSRKEDDNSRETGKETNAHQ
GTYAGNEPGANDKAPLLSIQIGGVNGDLPDVQWSVQIQKVLKAEDSGRIN
VKVKGVSLSVSLDPGAGASSLLPLQRPPSAPSPQPSPTTTTPQSSPFYRE
DDTDSLSRASSSPISVTPAGLVRETSGLFDDDSSGGSAGRGVGQPQECDA
RDVGLSAVVEGARGGLGDTGAEVNDVTFRHSQKVARLILICFASGTLSSA
LTKGTDKLRRRLKGPKGATTFSPQVTPLCSPVHHDRSDGFTTPTRPTPSQ
SPLYPEAASKAVKPPSEFVPVRDSFIGVRKNDGGSREAGGERSRASPGVS
DSSEDDKLACSIGYGSAGLLKVTECRCSVGTIDIQIDGSKFDGIYNLVAK
GLGDTIRDAVREAVEKAFTQGVERLVARINDRAAQLWCGIAPEPKQKPAK
VVCSAIRAQGIGKGRIEPFVKLRLFDKDGSQVAKRSTAALTSIAGAADAS
DRGGSSRNPCWIGLDNDLTLDLPEEGAQGYSLFFEVRQSGTLASNLIGST
RRSTLREIEALVAEKRGENANIDPEFCWDIDTGGKLTVRMSVSGLTPLRS
KKPSKVGFSHVSEITPTVDGDSSTISRRLA*
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