prot_F-distichus_contig10210.176.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig10210.176.1
Unique Nameprot_F-distichus_contig10210.176.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length129
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10210.176.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 128..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..127
NoneNo IPR availableTMHMMTMhelixcoord: 105..127

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 128..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..127
NoneNo IPR availableTMHMMTMhelixcoord: 105..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10210contigF-distichus_contig10210:299..6356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10210.176.1mRNA_F-distichus_contig10210.176.1Fucus distichus monoicousmRNAF-distichus_contig10210 299..6553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig10210.176.1 ID=prot_F-distichus_contig10210.176.1|Name=mRNA_F-distichus_contig10210.176.1|organism=Fucus distichus monoicous|type=polypeptide|length=129bp
LGTKRERRPLPQGNVSGPAPRKRFCLKISRLRRRQRGRLRFWRRLGRENS
TQKKGLAGGDARCRNTSPARKSWRRGKPRQGLQIAGWIEESTRLRRGSPP
PPRHFLIRGFPSLCTTISITAVMLFLVL*
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