prot_F-distichus_contig102093.172.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig102093.172.1
Unique Nameprot_F-distichus_contig102093.172.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length313
Homology
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 316 bits (809), Expect = 2.450e-94
Identity = 158/307 (51.47%), Postives = 211/307 (68.73%), Query Frame = 0
Query:    2 KANPQKAAGPSGLRCSHLQASLCDELVEDLAAFATLVFSCRVLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQF 308
            + NPQ + GPSGLR S LQ+SL  EL E +A   +++F    LP  FW LHTSANLSA+  K RP+A GD+ RR++G V CR+YG  LA++F+P GQYGVAV  G E++A  A L  ++G  +L+YD  NAFNS+ R   LPALA+++P ++PYA+N+YAREPPKLL++ D G + V+ SA GVQQGCNLGPLCYSAG LK L++FRANPPV GA+ ++FIDD+ V+LP   + + AA   VT W+Q  +   G++LNR   + L   G   +   EK R  ++ T L V   GMR+VGVPVG   +
Sbjct: 1169 RGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSGMA-VIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDY 1474          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 1.100e-84
Identity = 152/313 (48.56%), Postives = 197/313 (62.94%), Query Frame = 0
Query:    2 KANPQKAAGPSGLRCSHLQAS-LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF 312
            KANPQ A GP GLR S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSAL +K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G TILS+D  NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF+++ G  EVV S RGVQQGCNLG   +  G L  ++EF   PPVPG + + ++DD+   LPP L+ +M A   VT W+QERL  +GI L+    + L   G+    LT  ++  +   GL+V   GM VVG+PVGTE+FQR+F
Sbjct:  131 KANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNF 443          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 2.390e-84
Identity = 151/313 (48.24%), Postives = 196/313 (62.62%), Query Frame = 0
Query:    2 KANPQKAAGPSGLRCSHLQAS-LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF 312
            KANPQ A GP GLR S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSAL +K RP+A G VLRR+I   FC +Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G TILS+D  NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF+++ G  EVV S RGVQQGCNLG   +  G L  ++EF   PPVPGA+ + ++DD+ V LPP L+ ++ A   VT W+Q+ L  +GI L+    + L   G+    LT  ++  +  TGL+V   GM +VGVPVGTE FQR F
Sbjct:  131 KANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSF 443          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 1.030e-83
Identity = 152/313 (48.56%), Postives = 197/313 (62.94%), Query Frame = 0
Query:    2 KANPQKAAGPSGLRCSHLQAS-LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF 312
            KANPQ A GP GLR S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSAL +K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G TILS+D  NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF+++ G  EVV S RGVQQGCNLG   +  G L  ++EF   PPVPG + + ++DD+   LPP L+ +M A   VT W+QERL  +GI L+    + L   G+    LT  ++  +   GL+V   GM VVG+PVGTE+FQR+F
Sbjct:  131 KANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNF 443          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 9.970e-77
Identity = 136/291 (46.74%), Postives = 179/291 (61.51%), Query Frame = 0
Query:   23 LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF 312
            + D   E LA F+  VF     LP  FW LHTSANLSAL +K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G TILS+D  NA+NS+ R   LPA+A   P +  Y  N+YAR   KLLF+++ G  EVV S RGVQQGCNLG   +  G L  ++EF   PPVPGA+ + ++DD+ V LPP L+ ++ A   VT W+Q+ L  +GI L+      L   G+    LT  ++  +  TGL+V   GM +VGVPVGTE FQR F
Sbjct:    1 MSDYFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSF 291          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 244 bits (623), Expect = 5.930e-75
Identity = 131/260 (50.38%), Postives = 167/260 (64.23%), Query Frame = 0
Query:    2 KANPQKAAGPSGLRCSHLQAS-LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLN 259
            KANPQ A GP GLR S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSAL +K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G TILS+D  NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF+++ G  EVV S RGVQQGCNLG   +  G L  ++EF   PPVPG + + ++DD+   LPP L+ +M A   VT W+QERL  +GI L+
Sbjct:  131 KANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELS 390          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 3.500e-73
Identity = 135/291 (46.39%), Postives = 180/291 (61.86%), Query Frame = 0
Query:   23 LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF 312
            + D   E LA F+  VF     LP   W LHTSANLSAL +K RP+A G VLRR+I   F R+Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G TILS+D  NA+NS+ R   LPA+A + P +V Y  N+YAR   KLLF+++ G  EVV S RGVQQGCNLG   +  G L  ++EF   PPVPG + + ++DD+   LPP L+ +M A   VT W+QERL  +GI L+    + L   G+    LT  ++  +   GL+V   GM VVG+PVGTE+FQR+F
Sbjct:    1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNF 291          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5L3H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H3_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 4.960e-40
Identity = 81/166 (48.80%), Postives = 105/166 (63.25%), Query Frame = 0
Query:   23 LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQ 187
            + D+  E LA F+  VF     LP +FW   TSA+LSAL +K RP+A G VLRR+I   FCR+Y + +AD F+   Q+G  V  GVEI+A TA L  ++G TILS+D  NA+NSI R   L A+A   P +V Y  NLYAR   KLLF+++ G  E+V S R VQQ
Sbjct:    1 MSDDFSETLADFSYKVFYYGDELPDLFWGFQTSASLSALGEKKRPIAVGGVLRRIISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVASTAALSHQQGSTILSFDGRNAYNSILRSSILTAVATHTPHLVKYFGNLYARIKAKLLFKMEDGSIEMVRSQREVQQ 166          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 1.600e-35
Identity = 103/310 (33.23%), Postives = 159/310 (51.29%), Query Frame = 0
Query:    9 AGPSGLRCSHLQASLCDELV-EDLAA-----FATLVFSCRVLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF 312
            AG  G R SHL++    ++  ED        +  LV      P  FWTL   ++L AL +K RPV  G   RR+I A   R++  KL + F+   Q+GVAV+ GVE +A+ A L  + G  I+  D +NAFN+  R   +   A+ +P +V Y +  Y   P   ++E+D G    +E   GVQQG  +GP  +S   +  + + +      G    +++DDIT+ L     L   +   +T+ + E L   GI +NR    AL   G     +T++QR  ++  GLTV  +G+ VVGVP+GT+ + R+F
Sbjct:  556 AGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLK---DLTEESVQAMTDLVDE-LAEVGIVVNRAKSSALPPPG---HMITDQQRRLLEGVGLTVAGEGITVVGVPIGTDNYVREF 858          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 1.620e-29
Identity = 63/142 (44.37%), Postives = 87/142 (61.27%), Query Frame = 0
Query:  171 LDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF 312
            ++ G  E+V S RGVQQGCNLG   +S G L  ++EF   PPVPGA+ + ++DD+ V LPP L+ ++ A   VT W+Q+ L  +GI L+    + L   G     LT  ++  +  TGL+V   GM +VGVPVGTE FQR F
Sbjct:    1 MEDGSIEIVRSQRGVQQGCNLGGFGFSVGLLDTMKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSF 142          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN2.450e-9451.47Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5JCM0_9PHAE1.100e-8448.56Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KGJ4_9PHAE2.390e-8448.24Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LN63_9PHAE1.030e-8348.56Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE9.970e-7746.74Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KQ62_9PHAE5.930e-7550.38Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1H0_9PHAE3.500e-7346.39Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L3H3_9PHAE4.960e-4048.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH58_9PHAE1.600e-3533.23Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K541_9PHAE1.620e-2944.37Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 62..234
e-value: 9.2E-10
score: 38.4
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..291
score: 10.024

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 62..234
e-value: 9.2E-10
score: 38.4
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..291
score: 10.024

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig102093contigF-distichus_contig102093:595..1533 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig102093.172.1mRNA_F-distichus_contig102093.172.1Fucus distichus monoicousmRNAF-distichus_contig102093 241..1563 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig102093.172.1 ID=prot_F-distichus_contig102093.172.1|Name=mRNA_F-distichus_contig102093.172.1|organism=Fucus distichus monoicous|type=polypeptide|length=313bp
MKANPQKAAGPSGLRCSHLQASLCDELVEDLAAFATLVFSCRVLPQVFWT
LHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYG
VAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVP
AVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGS
LKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQER
LGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVG
VPVGTEQFQRDF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom