mRNA_F-distichus_contig102093.172.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig102093.172.1
Unique NamemRNA_F-distichus_contig102093.172.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 394 bits (1012), Expect = 7.480e-120
Identity = 208/439 (47.38%), Postives = 287/439 (65.38%), Query Frame = 1
Query:    1 FEEVTVKAVIMKANPQKAAGPSGLRCSHLQASLCDELVEDLAAFATLVFSCRVLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAELVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWALASII---------AAHDPAVCQNQTY----LGHDALRQAHLPIREGGLGLTSS 1278
            F   TV A I + NPQ + GPSGLR S LQ+SL  EL E +A   +++F    LP  FW LHTSANLSA+  K RP+A GD+ RR++G V CR+YG  LA++F+P GQYGVAV  G E++A  A L  ++G  +L+YD  NAFNS+ R   LPALA+++P ++PYA+N+YAREPPKLL++ D G + V+ SA GVQQGCNLGPLCYSAG LK L++FRANPPV GA+ ++FIDD+ V+LP   + + AA   VT W+Q  +   G++LNR   + L   G   +   EK R  ++ T L V   GMR+VGVPVG   + +    D   GEP +L++ + S++DAQAS QI+R SA +RL+ L R++PP +T +AA+ ++  VE  L +I+         A H+P    + +     L    +RQA LP+REGGLG+ S+
Sbjct: 1158 FATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSGMA-VIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVEQTLETILNGPSQPGEHAPHEPTEENSPSLPRLNLSPVGIRQARLPVREGGLGIPST 1595          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 362 bits (929), Expect = 8.490e-114
Identity = 199/443 (44.92%), Postives = 267/443 (60.27%), Query Frame = 1
Query:    1 FEEVTVKAVIMKANPQKAAGPSGLRCSHLQAS-LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAELVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWALASIIAAH---------------DPAVCQNQTYLGHDALRQAHLPIREGGLGLTSS 1278
            FE   +K  + KANPQ A GP GLR S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSAL +K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G TILS+D  NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF+++ G  EVV S RGVQQGCNLG   +  G L  ++EF   PPVPG + + ++DD+   LPP L+ +M A   VT W+QERL  +GI L+    + L   G+    LT  ++  +   GL+V   GM VVG+PVGTE+FQR+F      G+PAEL+  L +++D QAS+Q++RLS   RL HL RT+ PSIT  AA  ++ ++ WA++ I+                  DP   +   +    A  Q HLP+REGGLG+TS+
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSN 562          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 355 bits (910), Expect = 1.680e-113
Identity = 202/442 (45.70%), Postives = 268/442 (60.63%), Query Frame = 1
Query:    1 FEEVTVKAVIMKANPQKAAGPSGLRCSHLQAS-LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAELVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWALASIIAAHD------PAVCQNQT--------YLGHDALRQAHLPIREGGLGLTSS 1278
            FE   +K  + KANPQ A GP GLR S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSAL +K RP+A G VLRR+I   FC +Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G TILS+D  NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF+++ G  EVV S RGVQQGCNLG   +  G L  ++EF   PPVPGA+ + ++DD+ V LPP L+ ++ A   VT W+Q+ L  +GI L+    + L   G+    LT  ++  +  TGL+V   GM +VGVPVGTE FQR F  +   G PAEL+R L +++D QAS+Q++RLS   RL HL RT+ PSIT  AA  ++ L+ WA++ I+          P V + +         +    A  Q HLPIREGGLG+TSS
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSS 561          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 363 bits (932), Expect = 3.690e-112
Identity = 199/443 (44.92%), Postives = 267/443 (60.27%), Query Frame = 1
Query:    1 FEEVTVKAVIMKANPQKAAGPSGLRCSHLQAS-LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAELVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWALASIIAAH---------------DPAVCQNQTYLGHDALRQAHLPIREGGLGLTSS 1278
            FE   +K  + KANPQ A GP GLR S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSAL +K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G TILS+D  NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF+++ G  EVV S RGVQQGCNLG   +  G L  ++EF   PPVPG + + ++DD+   LPP L+ +M A   VT W+QERL  +GI L+    + L   G+    LT  ++  +   GL+V   GM VVG+PVGTE+FQR+F      G+PAEL+  L +++D QAS+Q++RLS   RL HL RT+ PSIT  AA  ++ ++ WA++ I+                  DP   +   +    A  Q HLP+REGGLG+TS+
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSN 562          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 320 bits (821), Expect = 1.090e-101
Identity = 181/409 (44.25%), Postives = 244/409 (59.66%), Query Frame = 1
Query:   97 LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAELVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWALASIIAA------------HDPAVCQNQT--YLGHDALRQAHLPIREGGLGLTSS 1278
            + D   E LA F+  VF     LP  FW LHTSANLSAL +K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G TILS+D  NA+NS+ R   LPA+A   P +  Y  N+YAR   KLLF+++ G  EVV S RGVQQGCNLG   +  G L  ++EF   PPVPGA+ + ++DD+ V LPP L+ ++ A   VT W+Q+ L  +GI L+      L   G+    LT  ++  +  TGL+V   GM +VGVPVGTE FQR F  +   G PAEL+  L +++D Q S+Q++R+S   RL HL RT+ PSIT  AA  +++L+ WA++ I+                PA  +     +    A  Q HLPIREGGLG+TSS
Sbjct:    1 MSDYFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLMIWAVSKIVLGKMANTVGIPTVEEVPANPEKSEVDFFKDSARAQVHLPIREGGLGITSS 409          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 1.160e-98
Identity = 179/410 (43.66%), Postives = 245/410 (59.76%), Query Frame = 1
Query:   97 LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAELVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWALASIIAAH---------------DPAVCQNQTYLGHDALRQAHLPIREGGLGLTSS 1278
            + D   E LA F+  VF     LP   W LHTSANLSAL +K RP+A G VLRR+I   F R+Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G TILS+D  NA+NS+ R   LPA+A + P +V Y  N+YAR   KLLF+++ G  EVV S RGVQQGCNLG   +  G L  ++EF   PPVPG + + ++DD+   LPP L+ +M A   VT W+QERL  +GI L+    + L   G+    LT  ++  +   GL+V   GM VVG+PVGTE+FQR+F      G+PAEL+  L +++D QAS+Q++RLS   RL HL RT+ PSIT  AA  ++ ++ WA++ I+                  DP   +   +    A  Q HLP+REGGLG+TS+
Sbjct:    1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSN 410          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 9.020e-76
Identity = 134/271 (49.45%), Postives = 172/271 (63.47%), Query Frame = 1
Query:    1 FEEVTVKAVIMKANPQKAAGPSGLRCSHLQAS-LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLN 807
            FE   +K  + KANPQ A GP GLR S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSAL +K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G TILS+D  NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF+++ G  EVV S RGVQQGCNLG   +  G L  ++EF   PPVPG + + ++DD+   LPP L+ +M A   VT W+QERL  +GI L+
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELS 390          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 2.130e-56
Identity = 111/260 (42.69%), Postives = 154/260 (59.23%), Query Frame = 1
Query:  541 LDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAELVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWALASIIAAHD------PAVCQNQT--------YLGHDALRQAHLPIREGGLGLTSS 1278
            ++ G  E+V S RGVQQGCNLG   +S G L  ++EF   PPVPGA+ + ++DD+ V LPP L+ ++ A   VT W+Q+ L  +GI L+    + L   G     LT  ++  +  TGL+V   GM +VGVPVGTE FQR F  +   G PAEL+R L +++D QAS+Q++RLS   RL HL RT+ PSIT  AA  ++ L+ WA++ I+          P V + +         +    A  Q HLPIREGGLG+TSS
Sbjct:    1 MEDGSIEIVRSQRGVQQGCNLGGFGFSVGLLDTMKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSS 260          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5JLD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD7_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 6.330e-45
Identity = 89/228 (39.04%), Postives = 131/228 (57.46%), Query Frame = 1
Query:  640 LQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAELVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWALASIIAAH---------------DPAVCQNQTYLGHDALRQAHLPIREGGLGLTSS 1278
            ++EF   PPVPG + + ++DD+   LPP L+ +M A   VT W+QERL  +GI L+    + L   G+    LT  ++  +   GL+V   GM VVG+P GTE+FQR+F      G+PAEL+  L +++D QAS+Q++RLS   RL HL RT+ PSIT  AA  ++ ++ WA++ I+                  DP   +   +    A  Q HLP+REGGLG+TS+
Sbjct:    1 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPAGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSN 228          
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 3.410e-43
Identity = 126/393 (32.06%), Postives = 197/393 (50.13%), Query Frame = 1
Query:    1 FEEVTVKAVIMKANPQKAAGPSGLRCSHLQASLCDELV-EDLAA-----FATLVFSCRVLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAE-LVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWAL 1158
            F+   +  VI   +    AG  G R SHL++    ++  ED        +  LV      P  FWTL   ++L AL +K RPV  G   RR+I A   R++  KL + F+   Q+GVAV+ GVE +A+ A L  + G  I+  D +NAFN+  R   +   A+ +P +V Y +  Y   P   ++E+D G    +E   GVQQG  +GP  +S   +  + + +      G    +++DDIT+ L     L   +   +T+ + E L   GI +NR    AL   G     +T++QR  ++  GLTV  +G+ VVGVP+GT+ + R+F    +    AE L R L  M D Q +  I  LS   R +++ R + P++T +A    + +V+WAL
Sbjct:  538 FDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLK---DLTEESVQAMTDLVDE-LAEVGIVVNRAKSSALPPPG---HMITDQQRRLLEGVGLTVAGEGITVVGVPIGTDNYVREFAMKVITEGGAEKLARMLPLMSDRQVANLITSLSLIQRSAYIERGIDPTLTKEACERLDNMVQWAL 923          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN7.480e-12047.38Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5JCM0_9PHAE8.490e-11444.92Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KGJ4_9PHAE1.680e-11345.70Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LN63_9PHAE3.690e-11244.92Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE1.090e-10144.25Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1H0_9PHAE1.160e-9843.66Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQ62_9PHAE9.020e-7649.45Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K541_9PHAE2.130e-5642.69Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLD7_9PHAE6.330e-4539.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH58_9PHAE3.410e-4332.06Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig102093contigF-distichus_contig102093:241..1563 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score85.5
Seed ortholog evalue4.8e-14
Seed eggNOG ortholog400682.PAC_15702057
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Ribonuclease H protein
EggNOG OGsKOG1075@1,KOG1075@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1278
Cds size939
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig102093.172.1prot_F-distichus_contig102093.172.1Fucus distichus monoicouspolypeptideF-distichus_contig102093 595..1533 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928935.1489468-UTR-F-distichus_contig102093:240..3441622928935.1489468-UTR-F-distichus_contig102093:240..344Fucus distichus monoicousUTRF-distichus_contig102093 241..344 -
1690885073.7989643-UTR-F-distichus_contig102093:240..3441690885073.7989643-UTR-F-distichus_contig102093:240..344Fucus distichus monoicousUTRF-distichus_contig102093 241..344 -
1622928935.1617367-UTR-F-distichus_contig102093:389..5941622928935.1617367-UTR-F-distichus_contig102093:389..594Fucus distichus monoicousUTRF-distichus_contig102093 390..594 -
1690885073.8093774-UTR-F-distichus_contig102093:389..5941690885073.8093774-UTR-F-distichus_contig102093:389..594Fucus distichus monoicousUTRF-distichus_contig102093 390..594 -
1622928935.201883-UTR-F-distichus_contig102093:1533..15631622928935.201883-UTR-F-distichus_contig102093:1533..1563Fucus distichus monoicousUTRF-distichus_contig102093 1534..1563 -
1690885073.8270035-UTR-F-distichus_contig102093:1533..15631690885073.8270035-UTR-F-distichus_contig102093:1533..1563Fucus distichus monoicousUTRF-distichus_contig102093 1534..1563 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928935.1783566-CDS-F-distichus_contig102093:594..15331622928935.1783566-CDS-F-distichus_contig102093:594..1533Fucus distichus monoicousCDSF-distichus_contig102093 595..1533 -
1690885073.818028-CDS-F-distichus_contig102093:594..15331690885073.818028-CDS-F-distichus_contig102093:594..1533Fucus distichus monoicousCDSF-distichus_contig102093 595..1533 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig102093.172.1

>prot_F-distichus_contig102093.172.1 ID=prot_F-distichus_contig102093.172.1|Name=mRNA_F-distichus_contig102093.172.1|organism=Fucus distichus monoicous|type=polypeptide|length=313bp
MKANPQKAAGPSGLRCSHLQASLCDELVEDLAAFATLVFSCRVLPQVFWT
LHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYG
VAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVP
AVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGS
LKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQER
LGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVG
VPVGTEQFQRDF*
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mRNA from alignment at F-distichus_contig102093:241..1563-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig102093.172.1 ID=mRNA_F-distichus_contig102093.172.1|Name=mRNA_F-distichus_contig102093.172.1|organism=Fucus distichus monoicous|type=mRNA|length=1323bp|location=Sequence derived from alignment at F-distichus_contig102093:241..1563- (Fucus distichus monoicous)
TTCGAGGAGGTCACGGTAAAAGCTGTAATCATGAAAGCCAACCCACAAAA GGCCGCAGGTCCGTCTGGACTACGCTGCAGCCATCTGCAGGCTTCGCTGT GCGATGAACTAGTCGAGGACCTCGCGGCGTTCGCGACGCTTGTTTTTTCC TGCCGTGTTTTGCCTCAAGTCTTCTGGACACTGCACACGAGCGCTAACCT TTCCGCGTTGGAGCAGAAGTCGAGACCAGTGGCGTGCGGCGATGTCTTGC GGAGAGTTATTGGCGCTGTTTTCTGCCGCCGATACGGCAGAAAGCTGGCA GATTACTTCCAGCCCGGGGGCCAGTACGGCGTAGCAGTTTCGGCTGGAGT AGAGATAATGGCGCTCACGGCGACACTTGGATTCGAAGAGGGTTGCACTA TTCTCTCATACGACAAAGCAAACGCCTTTAACAGCATATACCGCCACAAG TTCCTGCCCGCACTAGCCGAAATCGTTCCCGCAGTGGTCCCCTACGCATC AAACCTGTACGCACGGGAACCCCCAAAACTCCTGTTTGAACTAGACGGTG GACGTTCGGAAGTGGTCGAGTCAGCGCGGGGAGTGCAGCAAGGATGTAAT CTAGGTCCCCTTTGCTACAGCGCAGGTTCACTGAAGGCCCTACAAGAATT CAGAGCCAATCCACCGGTGCCAGGAGCGAGAGCGGTTTCGTTCATCGACG ACATCACGGTCATTCTACCACCGGAACTTTCTCTCGATATGGCAGCTACA GGGAAAGTTACCGAATGGCTGCAGGAACGCCTGGGGATAGAAGGTATCTC GCTGAACCGAAGGATTTTGCAGGCCCTGCTAGCAGGTGGAGTGGGACCAG AACAACTGACGGAAAAGCAGCGAGTGGCAATGGATACTACAGGGCTCACG GTGGTCCGACAGGGGATGAGGGTTGTGGGAGTACCAGTTGGAACAGAACA GTTCCAGCGCGACTTCTGACAGGATGCGGTTAATGGAGAGCCAGCTGAGC TCGTGAGGGCTCTGGTCTCAATGGAGGATGCCCAAGCGAGCTTTCAGATT ATGCGTCTATCTGCCACTTCTCGCCTCTCGCATCTGTTCCGAACAGTCCC GCCCTCCATAACAGGCCAAGCTGCTGCAAGCTATAACGCTTTGGTGGAGT GGGCGTTGGCGTCTATCATAGCCGGTGACGGAGCTGCCGCGGCAGGGCTA CAAACGTCAGCGGAAGTAGCCCACGATCCCGCGGTGTGCCAAAATCAGAC CTACCTGGGGCACGACGCCCTACGGCAGGCCCACCTGCCAATTCGAGAAG GCGGCCTTGGGCTCACCAGCAGC
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Coding sequence (CDS) from alignment at F-distichus_contig102093:241..1563-

>mRNA_F-distichus_contig102093.172.1 ID=mRNA_F-distichus_contig102093.172.1|Name=mRNA_F-distichus_contig102093.172.1|organism=Fucus distichus monoicous|type=CDS|length=1878bp|location=Sequence derived from alignment at F-distichus_contig102093:241..1563- (Fucus distichus monoicous)
ATGAAAGCCAACCCACAAAAGGCCGCAGGTCCGTCTGGACTACGCTGCAG
CCATCTGCAGGCTTCGCTGTGCGATGAACTAGTCGAGGACCTCGCGGCGT
TCGCGACGCTTGTTTTTTCCTGCCGTGTTTTGCCTCAAGTCTTCTGGACA
CTGCACACGAGCGCTAACCTTTCCGCGTTGGAGCAGAAGTCGAGACCAGT
GGCGTGCGGCGATGTCTTGCGGAGAGTTATTGGCGCTGTTTTCTGCCGCC
GATACGGCAGAAAGCTGGCAGATTACTTCCAGCCCGGGGGCCAGTACGGC
GTAGCAGTTTCGGCTGGAGTAGAGATAATGGCGCTCACGGCGACACTTGG
ATTCGAAGAGGGTTGCACTATTCTCTCATACGACAAAGCAAACGCCTTTA
ACAGCATATACCGCCACAAGTTCCTGCCCGCACTAGCCGAAATCGTTCCC
GCAGTGGTCCCCTACGCATCAAACCTGTACGCACGGGAACCCCCAAAACT
CCTGTTTGAACTAGACGGTGGACGTTCGGAAGTGGTCGAGTCAGCGCGGG
GAGTGCAGCAAGGATGTAATCTAGGTCCCCTTTGCTACAGCGCAGGTTCA
CTGAAGGCCCTACAAGAATTCAGAGCCAATCCACCGGTGCCAGGAGCGAG
AGCGGTTTCGTTCATCGACGACATCACGGTCATTCTACCACCGGAACTTT
CTCTCGATATGGCAGCTACAGGGAAAGTTACCGAATGGCTGCAGGAACGC
CTGGGGATAGAAGGTATCTCGCTGAACCGAAGGATTTTGCAGGCCCTGCT
AGCAGGTGGAGTGGGACCAGAACAACTGACGGAAAAGCAGCGAGTGGCAA
TGGATACTACAGGGCTCACGGTGGTCCGACAGGGGATGAGGGTTGTGGGA
GTACCAGTTGGAACAGAACAGTTCCAGCGCGACTTCTGAATGAAAGCCAA
CCCACAAAAGGCCGCAGGTCCGTCTGGACTACGCTGCAGCCATCTGCAGG
CTTCGCTGTGCGATGAACTAGTCGAGGACCTCGCGGCGTTCGCGACGCTT
GTTTTTTCCTGCCGTGTTTTGCCTCAAGTCTTCTGGACACTGCACACGAG
CGCTAACCTTTCCGCGTTGGAGCAGAAGTCGAGACCAGTGGCGTGCGGCG
ATGTCTTGCGGAGAGTTATTGGCGCTGTTTTCTGCCGCCGATACGGCAGA
AAGCTGGCAGATTACTTCCAGCCCGGGGGCCAGTACGGCGTAGCAGTTTC
GGCTGGAGTAGAGATAATGGCGCTCACGGCGACACTTGGATTCGAAGAGG
GTTGCACTATTCTCTCATACGACAAAGCAAACGCCTTTAACAGCATATAC
CGCCACAAGTTCCTGCCCGCACTAGCCGAAATCGTTCCCGCAGTGGTCCC
CTACGCATCAAACCTGTACGCACGGGAACCCCCAAAACTCCTGTTTGAAC
TAGACGGTGGACGTTCGGAAGTGGTCGAGTCAGCGCGGGGAGTGCAGCAA
GGATGTAATCTAGGTCCCCTTTGCTACAGCGCAGGTTCACTGAAGGCCCT
ACAAGAATTCAGAGCCAATCCACCGGTGCCAGGAGCGAGAGCGGTTTCGT
TCATCGACGACATCACGGTCATTCTACCACCGGAACTTTCTCTCGATATG
GCAGCTACAGGGAAAGTTACCGAATGGCTGCAGGAACGCCTGGGGATAGA
AGGTATCTCGCTGAACCGAAGGATTTTGCAGGCCCTGCTAGCAGGTGGAG
TGGGACCAGAACAACTGACGGAAAAGCAGCGAGTGGCAATGGATACTACA
GGGCTCACGGTGGTCCGACAGGGGATGAGGGTTGTGGGAGTACCAGTTGG
AACAGAACAGTTCCAGCGCGACTTCTGA
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