mRNA_F-distichus_contig102093.172.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN) HSP 1 Score: 394 bits (1012), Expect = 7.480e-120 Identity = 208/439 (47.38%), Postives = 287/439 (65.38%), Query Frame = 1
Query: 1 FEEVTVKAVIMKANPQKAAGPSGLRCSHLQASLCDELVEDLAAFATLVFSCRVLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAELVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWALASII---------AAHDPAVCQNQTY----LGHDALRQAHLPIREGGLGLTSS 1278
F TV A I + NPQ + GPSGLR S LQ+SL EL E +A +++F LP FW LHTSANLSA+ K RP+A GD+ RR++G V CR+YG LA++F+P GQYGVAV G E++A A L ++G +L+YD NAFNS+ R LPALA+++P ++PYA+N+YAREPPKLL++ D G + V+ SA GVQQGCNLGPLCYSAG LK L++FRANPPV GA+ ++FIDD+ V+LP + + AA VT W+Q + G++LNR + L G + EK R ++ T L V GMR+VGVPVG + + D GEP +L++ + S++DAQAS QI+R SA +RL+ L R++PP +T +AA+ ++ VE L +I+ A H+P + + L +RQA LP+REGGLG+ S+
Sbjct: 1158 FATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSGMA-VIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVEQTLETILNGPSQPGEHAPHEPTEENSPSLPRLNLSPVGIRQARLPVREGGLGIPST 1595
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE) HSP 1 Score: 362 bits (929), Expect = 8.490e-114 Identity = 199/443 (44.92%), Postives = 267/443 (60.27%), Query Frame = 1
Query: 1 FEEVTVKAVIMKANPQKAAGPSGLRCSHLQAS-LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAELVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWALASIIAAH---------------DPAVCQNQTYLGHDALRQAHLPIREGGLGLTSS 1278
FE +K + KANPQ A GP GLR S+LQA + D E LA F+ VF LP FW LHTSANLSAL +K RP+A G VLRR+I FCR+Y +A+ F+ Q+G V GVEI+A TA L ++G TILS+D NA+NS+ R LPA+A P +V Y N+YAR KLLF+++ G EVV S RGVQQGCNLG + G L ++EF PPVPG + + ++DD+ LPP L+ +M A VT W+QERL +GI L+ + L G+ LT ++ + GL+V GM VVG+PVGTE+FQR+F G+PAEL+ L +++D QAS+Q++RLS RL HL RT+ PSIT AA ++ ++ WA++ I+ DP + + A Q HLP+REGGLG+TS+
Sbjct: 120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSN 562
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE) HSP 1 Score: 355 bits (910), Expect = 1.680e-113 Identity = 202/442 (45.70%), Postives = 268/442 (60.63%), Query Frame = 1
Query: 1 FEEVTVKAVIMKANPQKAAGPSGLRCSHLQAS-LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAELVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWALASIIAAHD------PAVCQNQT--------YLGHDALRQAHLPIREGGLGLTSS 1278
FE +K + KANPQ A GP GLR S+LQA + D E LA F+ VF LP FW LHTSANLSAL +K RP+A G VLRR+I FC +Y +A+ F+ Q+G V GVEI+A TA L ++G TILS+D NA+NS+ R LPA+A P +V Y N+YAR KLLF+++ G EVV S RGVQQGCNLG + G L ++EF PPVPGA+ + ++DD+ V LPP L+ ++ A VT W+Q+ L +GI L+ + L G+ LT ++ + TGL+V GM +VGVPVGTE FQR F + G PAEL+R L +++D QAS+Q++RLS RL HL RT+ PSIT AA ++ L+ WA++ I+ P V + + + A Q HLPIREGGLG+TSS
Sbjct: 120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSS 561
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE) HSP 1 Score: 363 bits (932), Expect = 3.690e-112 Identity = 199/443 (44.92%), Postives = 267/443 (60.27%), Query Frame = 1
Query: 1 FEEVTVKAVIMKANPQKAAGPSGLRCSHLQAS-LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAELVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWALASIIAAH---------------DPAVCQNQTYLGHDALRQAHLPIREGGLGLTSS 1278
FE +K + KANPQ A GP GLR S+LQA + D E LA F+ VF LP FW LHTSANLSAL +K RP+A G VLRR+I FCR+Y +A+ F+ Q+G V GVEI+A TA L ++G TILS+D NA+NS+ R LPA+A P +V Y N+YAR KLLF+++ G EVV S RGVQQGCNLG + G L ++EF PPVPG + + ++DD+ LPP L+ +M A VT W+QERL +GI L+ + L G+ LT ++ + GL+V GM VVG+PVGTE+FQR+F G+PAEL+ L +++D QAS+Q++RLS RL HL RT+ PSIT AA ++ ++ WA++ I+ DP + + A Q HLP+REGGLG+TS+
Sbjct: 120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSN 562
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE) HSP 1 Score: 320 bits (821), Expect = 1.090e-101 Identity = 181/409 (44.25%), Postives = 244/409 (59.66%), Query Frame = 1
Query: 97 LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAELVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWALASIIAA------------HDPAVCQNQT--YLGHDALRQAHLPIREGGLGLTSS 1278
+ D E LA F+ VF LP FW LHTSANLSAL +K RP+A G VLRR+I FCR+Y +A+ F+ Q+G V GVEI+A TA L ++G TILS+D NA+NS+ R LPA+A P + Y N+YAR KLLF+++ G EVV S RGVQQGCNLG + G L ++EF PPVPGA+ + ++DD+ V LPP L+ ++ A VT W+Q+ L +GI L+ L G+ LT ++ + TGL+V GM +VGVPVGTE FQR F + G PAEL+ L +++D Q S+Q++R+S RL HL RT+ PSIT AA +++L+ WA++ I+ PA + + A Q HLPIREGGLG+TSS
Sbjct: 1 MSDYFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLMIWAVSKIVLGKMANTVGIPTVEEVPANPEKSEVDFFKDSARAQVHLPIREGGLGITSS 409
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE) HSP 1 Score: 329 bits (843), Expect = 1.160e-98 Identity = 179/410 (43.66%), Postives = 245/410 (59.76%), Query Frame = 1
Query: 97 LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAELVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWALASIIAAH---------------DPAVCQNQTYLGHDALRQAHLPIREGGLGLTSS 1278
+ D E LA F+ VF LP W LHTSANLSAL +K RP+A G VLRR+I F R+Y +A+ F+ Q+G V GVEI+A TA L ++G TILS+D NA+NS+ R LPA+A + P +V Y N+YAR KLLF+++ G EVV S RGVQQGCNLG + G L ++EF PPVPG + + ++DD+ LPP L+ +M A VT W+QERL +GI L+ + L G+ LT ++ + GL+V GM VVG+PVGTE+FQR+F G+PAEL+ L +++D QAS+Q++RLS RL HL RT+ PSIT AA ++ ++ WA++ I+ DP + + A Q HLP+REGGLG+TS+
Sbjct: 1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSN 410
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE) HSP 1 Score: 250 bits (639), Expect = 9.020e-76 Identity = 134/271 (49.45%), Postives = 172/271 (63.47%), Query Frame = 1
Query: 1 FEEVTVKAVIMKANPQKAAGPSGLRCSHLQAS-LCDELVEDLAAFATLVFSCR-VLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLN 807
FE +K + KANPQ A GP GLR S+LQA + D E LA F+ VF LP FW LHTSANLSAL +K RP+A G VLRR+I FCR+Y +A+ F+ Q+G V GVEI+A TA L ++G TILS+D NA+NS+ R LPA+A P +V Y N+YAR KLLF+++ G EVV S RGVQQGCNLG + G L ++EF PPVPG + + ++DD+ LPP L+ +M A VT W+QERL +GI L+
Sbjct: 120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELS 390
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE) HSP 1 Score: 196 bits (499), Expect = 2.130e-56 Identity = 111/260 (42.69%), Postives = 154/260 (59.23%), Query Frame = 1
Query: 541 LDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAELVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWALASIIAAHD------PAVCQNQT--------YLGHDALRQAHLPIREGGLGLTSS 1278
++ G E+V S RGVQQGCNLG +S G L ++EF PPVPGA+ + ++DD+ V LPP L+ ++ A VT W+Q+ L +GI L+ + L G LT ++ + TGL+V GM +VGVPVGTE FQR F + G PAEL+R L +++D QAS+Q++RLS RL HL RT+ PSIT AA ++ L+ WA++ I+ P V + + + A Q HLPIREGGLG+TSS
Sbjct: 1 MEDGSIEIVRSQRGVQQGCNLGGFGFSVGLLDTMKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSS 260
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5JLD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD7_9PHAE) HSP 1 Score: 167 bits (423), Expect = 6.330e-45 Identity = 89/228 (39.04%), Postives = 131/228 (57.46%), Query Frame = 1
Query: 640 LQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAELVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWALASIIAAH---------------DPAVCQNQTYLGHDALRQAHLPIREGGLGLTSS 1278
++EF PPVPG + + ++DD+ LPP L+ +M A VT W+QERL +GI L+ + L G+ LT ++ + GL+V GM VVG+P GTE+FQR+F G+PAEL+ L +++D QAS+Q++RLS RL HL RT+ PSIT AA ++ ++ WA++ I+ DP + + A Q HLP+REGGLG+TS+
Sbjct: 1 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPAGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSN 228
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE) HSP 1 Score: 172 bits (437), Expect = 3.410e-43 Identity = 126/393 (32.06%), Postives = 197/393 (50.13%), Query Frame = 1
Query: 1 FEEVTVKAVIMKANPQKAAGPSGLRCSHLQASLCDELV-EDLAA-----FATLVFSCRVLPQVFWTLHTSANLSALEQKSRPVACGDVLRRVIGAVFCRRYGRKLADYFQPGGQYGVAVSAGVEIMALTATLGFEEGCTILSYDKANAFNSIYRHKFLPALAEIVPAVVPYASNLYAREPPKLLFELDGGRSEVVESARGVQQGCNLGPLCYSAGSLKALQEFRANPPVPGARAVSFIDDITVILPPELSLDMAATGKVTEWLQERLGIEGISLNRRILQALLAGGVGPEQLTEKQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF*QDAVNGEPAE-LVRALVSMEDAQASFQIMRLSATSRLSHLFRTVPPSITGQAAASYNALVEWAL 1158
F+ + VI + AG G R SHL++ ++ ED + LV P FWTL ++L AL +K RPV G RR+I A R++ KL + F+ Q+GVAV+ GVE +A+ A L + G I+ D +NAFN+ R + A+ +P +V Y + Y P ++E+D G +E GVQQG +GP +S + + + + G +++DDIT+ L L + +T+ + E L GI +NR AL G +T++QR ++ GLTV +G+ VVGVP+GT+ + R+F + AE L R L M D Q + I LS R +++ R + P++T +A + +V+WAL
Sbjct: 538 FDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLK---DLTEESVQAMTDLVDE-LAEVGIVVNRAKSSALPPPG---HMITDQQRRLLEGVGLTVAGEGITVVGVPIGTDNYVREFAMKVITEGGAEKLARMLPLMSDRQVANLITSLSLIQRSAYIERGIDPTLTKEACERLDNMVQWAL 923 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102093.172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig102093.172.1 >prot_F-distichus_contig102093.172.1 ID=prot_F-distichus_contig102093.172.1|Name=mRNA_F-distichus_contig102093.172.1|organism=Fucus distichus monoicous|type=polypeptide|length=313bp MKANPQKAAGPSGLRCSHLQASLCDELVEDLAAFATLVFSCRVLPQVFWTback to top mRNA from alignment at F-distichus_contig102093:241..1563- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig102093.172.1 ID=mRNA_F-distichus_contig102093.172.1|Name=mRNA_F-distichus_contig102093.172.1|organism=Fucus distichus monoicous|type=mRNA|length=1323bp|location=Sequence derived from alignment at F-distichus_contig102093:241..1563- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig102093:241..1563- >mRNA_F-distichus_contig102093.172.1 ID=mRNA_F-distichus_contig102093.172.1|Name=mRNA_F-distichus_contig102093.172.1|organism=Fucus distichus monoicous|type=CDS|length=1878bp|location=Sequence derived from alignment at F-distichus_contig102093:241..1563- (Fucus distichus monoicous)back to top |