prot_F-distichus_contig1020.164.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig1020.164.1
Unique Nameprot_F-distichus_contig1020.164.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length237
Homology
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BLAST of mRNA_F-distichus_contig1020.164.1 vs. uniprot
Match: D8LCQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ1_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 1.200e-69
Identity = 127/232 (54.74%), Postives = 155/232 (66.81%), Query Frame = 0 
Query:    1 MLDRVVLAAAAHPGILGAIARGEASSLQNGMGDGGSMSREHVDRGDDGRALELLELDLGFLMVAFSAAVNTTPTERIEQLWELARERAGLGGQVELEAAASRFRGDGGSMSGGVPEDDGGDHEGPPIPAWAAMEVVGMLMASRQLPAERYAVKDEKRAWPVQQYRPATGRDAFLKGLADLHEEEQKLSKGWIERKLAPKYDPLKEERVSLELFEKVVRSRPVCAWGECLGGR 232
            +LDR+ L AAAHPGILGA ARGE        G+GG         G    + + +EL++ FLMVAFSAAVNT P ER+ QLW++A+ R+                   G+  GG  +D G   EG  +PA  A+ +VGMLMAS QLP+ RYAVKDE R WPVQQYR A+GRDAFL+GL  LHE+E+K +KGWIERKLAP YDP  EE++S ELFE+V+RS PVCAWGECLG R
Sbjct:   95 LLDRMALTAAAHPGILGAAARGETPHSGGSSGEGGVG-------GWASSSADAVELEIEFLMVAFSAAVNTRPAERMRQLWDMAQGRSM------------------GAADGGRDQDTG---EGALLPASKAIALVGMLMASHQLPSGRYAVKDESRVWPVQQYRLASGRDAFLEGLLSLHEDEEKRTKGWIERKLAPAYDPANEEQISFELFERVLRSGPVCAWGECLGIR 298
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BLAST of mRNA_F-distichus_contig1020.164.1 vs. uniprot
Match: A0A6H5JDJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDJ3_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 2.990e-65
Identity = 123/232 (53.02%), Postives = 149/232 (64.22%), Query Frame = 0 
Query:    1 MLDRVVLAAAAHPGILGAIARGEASSLQNGMGDGGSMSREHVDRGDDGRALELLELDLGFLMVAFSAAVNTTPTERIEQLWELARERAGLGGQVELEAAASRFRGDGGSMSGGVPEDDGGDHEGPPIPAWAAMEVVGMLMASRQLPAERYAVKDEKRAWPVQQYRPATGRDAFLKGLADLHEEEQKLSKGWIERKLAPKYDPLKEERVSLELFEKVVRSRPVCAWGECLGGR 232
            +LDR+VL AAAH GILGA ARGE        G+GG      +       + + +EL++ FLMVAFSAAVNT P ER  QLW++A+ R                     SM       D    E   +PA  A+ +VGMLMAS QLP+ RYAVKDE R WPVQQYR A+GRDAFL+GL  LHE+E+K +KGWIERKLAP YDP +EE++S ELFE+V+RS PVCAWGECLG R
Sbjct:  222 LLDRMVLTAAAHRGILGAAARGETPHSGGSSGEGGVEGWASI-------SADAVELEVDFLMVAFSAAVNTRPAERTRQLWDMAQGR---------------------SMGATDRGQDQDTDEATLLPASKAISLVGMLMASHQLPSGRYAVKDESRVWPVQQYRLASGRDAFLEGLLSLHEDEEKRTKGWIERKLAPAYDPAQEEQISFELFERVLRSGPVCAWGECLGIR 425
[Close]
BLAST of mRNA_F-distichus_contig1020.164.1 vs. uniprot
Match: A0A835Z460_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z460_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.810e-19
Identity = 44/101 (43.56%), Postives = 65/101 (64.36%), Query Frame = 0 
Query:  135 VVGMLMASRQLPAERYAVKDEKRAWPVQQYRPATGRDAFLKGLADLHEEEQKLSKGWIERKLAPKYDPLKEERVSLELFEKVVRSRPVCAWGECLGGRIYR 235
            ++ +L+A+RQLP+ RYA+K  ++ WP QQYR A+G D     LA+LH++++K  KGWIERKL+          +S + F+ ++    VCAWGEC  GR  R
Sbjct:  181 LLDLLLATRQLPSSRYAIKSGEK-WPTQQYRLASGTDLLENALAELHDDDEKKKKGWIERKLSAPRAQSAASPISYQQFKDILECNCVCAWGECFVGRADR 280
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig1020.164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LCQ1_ECTSI1.200e-6954.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDJ3_9PHAE2.990e-6553.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z460_9STRA4.810e-1943.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..236
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..236
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig1020contigF-distichus_contig1020:10069..15485 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig1020.164.1mRNA_F-distichus_contig1020.164.1Fucus distichus monoicousmRNAF-distichus_contig1020 8624..23163 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig1020.164.1 ID=prot_F-distichus_contig1020.164.1|Name=mRNA_F-distichus_contig1020.164.1|organism=Fucus distichus monoicous|type=polypeptide|length=237bp
MLDRVVLAAAAHPGILGAIARGEASSLQNGMGDGGSMSREHVDRGDDGRA
LELLELDLGFLMVAFSAAVNTTPTERIEQLWELARERAGLGGQVELEAAA
SRFRGDGGSMSGGVPEDDGGDHEGPPIPAWAAMEVVGMLMASRQLPAERY
AVKDEKRAWPVQQYRPATGRDAFLKGLADLHEEEQKLSKGWIERKLAPKY
DPLKEERVSLELFEKVVRSRPVCAWGECLGGRIYRA*
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