prot_F-distichus_contig101839.152.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig101839.152.1
Unique Nameprot_F-distichus_contig101839.152.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length56
Homology
BLAST of mRNA_F-distichus_contig101839.152.1 vs. uniprot
Match: A0A6H5K552_9PHAE (Condensin complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K552_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 3.430e-17
Identity = 36/42 (85.71%), Postives = 41/42 (97.62%), Query Frame = 0
Query:   13 QEEQSGVTVPFYFICILHLANEKGLRLEGRQDLLDFSVSSDP 54
            +EEQ+GVTVPFYFIC+LHLANEKGL+LEGR DLLDFSV+SDP
Sbjct:  323 KEEQTGVTVPFYFICLLHLANEKGLKLEGRDDLLDFSVASDP 364          
BLAST of mRNA_F-distichus_contig101839.152.1 vs. uniprot
Match: D8LD70_ECTSI (Condensin complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD70_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 6.420e-16
Identity = 35/42 (83.33%), Postives = 40/42 (95.24%), Query Frame = 0
Query:   13 QEEQSGVTVPFYFICILHLANEKGLRLEGRQDLLDFSVSSDP 54
            +EEQ+GVTV FYFIC+LHLANEKGL+LEGR DLLDFSV+SDP
Sbjct:  792 KEEQTGVTVSFYFICLLHLANEKGLKLEGRDDLLDFSVASDP 833          
BLAST of mRNA_F-distichus_contig101839.152.1 vs. uniprot
Match: A0A835Z1S3_9STRA (Condensin complex subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S3_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 4.010e-12
Identity = 28/40 (70.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:   13 QEEQSGVTVPFYFICILHLANEKGLRLEGRQDLLDFSVSS 52
            +E+QSGVTV +YFIC+LHLANEKGLRLEG+ DL+DF + +
Sbjct:  800 KEDQSGVTVSYYFICLLHLANEKGLRLEGQDDLMDFGIGA 839          
BLAST of mRNA_F-distichus_contig101839.152.1 vs. uniprot
Match: A0A7S3GUA6_9STRA (Condensin complex subunit 2 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GUA6_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 9.250e-10
Identity = 24/38 (63.16%), Postives = 30/38 (78.95%), Query Frame = 0
Query:   16 QSGVTVPFYFICILHLANEKGLRLEGRQDLLDFSVSSD 53
            Q  VT+PFYFIC+LHLANE GLR+E R+D+ D  +S D
Sbjct:   63 QQDVTLPFYFICLLHLANEHGLRIEDREDMSDLVISMD 100          
BLAST of mRNA_F-distichus_contig101839.152.1 vs. uniprot
Match: A0A7S1XKV0_9STRA (Condensin complex subunit 2 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKV0_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 2.060e-9
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 0
Query:   14 EEQSGVTVPFYFICILHLANEKGLRLEG--RQDLLDFSV 50
            E Q+GVTVPFYFIC+LHLANEKGL+LE   R DL DF +
Sbjct:  461 EAQTGVTVPFYFICLLHLANEKGLKLENPNRADLTDFRI 499          
BLAST of mRNA_F-distichus_contig101839.152.1 vs. uniprot
Match: A0A7S2SDZ0_9STRA (Condensin complex subunit 2 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SDZ0_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 3.870e-9
Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 0
Query:   15 EQSGVTVPFYFICILHLANEKGLRLEGRQDLLDFSV 50
            +   VTVPFYFIC+LHLANE GL LEGR+DL DF +
Sbjct:  577 DDPNVTVPFYFICLLHLANENGLELEGREDLSDFII 612          
BLAST of mRNA_F-distichus_contig101839.152.1 vs. uniprot
Match: A0A6T5XJK6_9STRA (Condensin complex subunit 2 n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A6T5XJK6_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 6.410e-9
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 0
Query:   14 EEQSGVTVPFYFICILHLANEKGLRLEGRQDLLDFSV 50
            + QS VTVPFYFIC+LHLANEKGLRLE  + L DF++
Sbjct:   89 QSQSDVTVPFYFICLLHLANEKGLRLES-EGLQDFNI 124          
BLAST of mRNA_F-distichus_contig101839.152.1 vs. uniprot
Match: A0A7S3LMK8_9STRA (Condensin complex subunit 2 n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LMK8_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 7.220e-9
Identity = 23/37 (62.16%), Postives = 31/37 (83.78%), Query Frame = 0
Query:   15 EQSGVTVPFYFICILHLANEKGLRLEGRQDLLDFSVS 51
            + S VT+P+YFIC+LHLANEKGL L+G +DL DF ++
Sbjct:  553 DDSSVTIPYYFICVLHLANEKGLELKGSEDLSDFIIN 589          
BLAST of mRNA_F-distichus_contig101839.152.1 vs. uniprot
Match: A0A7S4HYK3_9STRA (Condensin complex subunit 2 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HYK3_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 9.930e-9
Identity = 28/45 (62.22%), Postives = 34/45 (75.56%), Query Frame = 0
Query:   10 LPFQEEQSGVTVPFYFICILHLANEKGLRLEGR-QDLLDFSVSSD 53
            L   + QS VTVPFYFICILHLANEKGL+L+    +L+DF +S D
Sbjct:  855 LEASQSQSEVTVPFYFICILHLANEKGLKLDSTGHNLIDFVISRD 899          
BLAST of mRNA_F-distichus_contig101839.152.1 vs. uniprot
Match: A0A3L6USJ3_9STRA (Condensin complex subunit 2 (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6USJ3_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.500e-8
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 0
Query:   18 GVTVPFYFICILHLANEKGLRLEGRQDLLDFSVSSDP 54
             VTV FYFIC+LHLAN+KGL L G+ D+ DF +  DP
Sbjct:   78 NVTVSFYFICMLHLANDKGLELVGQDDMRDFQILHDP 114          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101839.152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K552_9PHAE3.430e-1785.71Condensin complex subunit 2 n=1 Tax=Ectocarpus sp.... [more]
D8LD70_ECTSI6.420e-1683.33Condensin complex subunit 2 n=1 Tax=Ectocarpus sil... [more]
A0A835Z1S3_9STRA4.010e-1270.00Condensin complex subunit 2 n=1 Tax=Tribonema minu... [more]
A0A7S3GUA6_9STRA9.250e-1063.16Condensin complex subunit 2 n=1 Tax=Spumella elong... [more]
A0A7S1XKV0_9STRA2.060e-971.79Condensin complex subunit 2 n=1 Tax=Phaeomonas par... [more]
A0A7S2SDZ0_9STRA3.870e-969.44Condensin complex subunit 2 n=1 Tax=labyrinthulid ... [more]
A0A6T5XJK6_9STRA6.410e-970.27Condensin complex subunit 2 n=1 Tax=Thalassionema ... [more]
A0A7S3LMK8_9STRA7.220e-962.16Condensin complex subunit 2 n=1 Tax=Aplanochytrium... [more]
A0A7S4HYK3_9STRA9.930e-962.22Condensin complex subunit 2 n=1 Tax=Odontella auri... [more]
A0A3L6USJ3_9STRA1.500e-862.16Condensin complex subunit 2 (Fragment) n=3 Tax=Aph... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022816Condensin complex subunit 2/barrenPFAMPF05786Cnd2coord: 17..51
e-value: 3.0E-9
score: 36.1
IPR022816Condensin complex subunit 2/barrenPANTHERPTHR13108FAMILY NOT NAMEDcoord: 10..53
NoneNo IPR availablePANTHERPTHR13108:SF9CONDENSIN COMPLEX SUBUNIT 2coord: 10..53

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022816Condensin complex subunit 2/barrenPFAMPF05786Cnd2coord: 17..51
e-value: 3.0E-9
score: 36.1
IPR022816Condensin complex subunit 2/barrenPANTHERPTHR13108FAMILY NOT NAMEDcoord: 10..53
NoneNo IPR availablePANTHERPTHR13108:SF9CONDENSIN COMPLEX SUBUNIT 2coord: 10..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101839contigF-distichus_contig101839:1227..1394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101839.152.1mRNA_F-distichus_contig101839.152.1Fucus distichus monoicousmRNAF-distichus_contig101839 1227..1394 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig101839.152.1 ID=prot_F-distichus_contig101839.152.1|Name=mRNA_F-distichus_contig101839.152.1|organism=Fucus distichus monoicous|type=polypeptide|length=56bp
SVLSPCATPLPFQEEQSGVTVPFYFICILHLANEKGLRLEGRQDLLDFSV
SSDPC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022816Condensin_barren_su2