prot_F-distichus_contig101782.149.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig101782.149.1
Unique Nameprot_F-distichus_contig101782.149.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length167
Homology
BLAST of mRNA_F-distichus_contig101782.149.1 vs. uniprot
Match: D1GJT2_FUCVE (50S ribosomal protein L3, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJT2_FUCVE)

HSP 1 Score: 263 bits (672), Expect = 2.720e-87
Identity = 162/166 (97.59%), Postives = 164/166 (98.80%), Query Frame = 0
Query:    1 NNNNAVQIGYLKRQVLKLNKAELGHLTKNGLLPLLYLREYKVPDPTNYSLGQVIDVDYFQIGQFVNVSGKSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXMAGQLGAKKVTISKLEILGIDSKHSLLILKGSVPGKSGNLLNVSPSDKF 166
            N  +AVQIGYLKRQVLKLNKAELGHLTKNGLLPLLYLREYKVPDPTNYSLGQVI+VDYFQIGQFVNVSGKSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXMAGQLGAKKVTISKLEILGIDSKHSLLILKGSVPGKSGNLLNVSPSDKF
Sbjct:   44 NGYSAVQIGYLKRQVLKLNKAELGHLTKNGLLPLLYLREYKVPDPTNYSLGQVINVDYFQIGQFVNVSGKSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXMAGQLGAKKVTISKLEILGIDSKHSLLILKGSVPGKSGNLLNVSPSDKF 209          
BLAST of mRNA_F-distichus_contig101782.149.1 vs. uniprot
Match: A0A8F0JYJ1_9PHAE (Ribosomal protein L3 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JYJ1_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 5.210e-56
Identity = 121/164 (73.78%), Postives = 138/164 (84.15%), Query Frame = 0
Query:    1 NNNNAVQIGYLKRQVLKLNKAELGHLTKNGLLPLLYLREYKVPDPTNYSLGQVIDVDYFQIGQFVNVSGKSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXMAGQLGAKKVTISKLEILGIDSKHSLLILKGSVPGKSGNLLNVSPSD 164
            N  NAVQIGY K Q L L KAELGHL KNGL PL +L EY+V +  +YSLGQV++VD+FQIGQFVN++GKSIGKGFSGN KRH FKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXX     GAK +T+SKL+ILGID K++LLILKGSVPGK GNL+ + PS+
Sbjct:   33 NGYNAVQIGYSKGQKLNLKKAELGHLKKNGLPPLSHLCEYRVTEQEDYSLGQVLNVDHFQIGQFVNITGKSIGKGFSGNHKRHKFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKTITVSKLKILGIDLKNNLLILKGSVPGKPGNLIKIIPSN 196          
BLAST of mRNA_F-distichus_contig101782.149.1 vs. uniprot
Match: A0A7S6ZPA7_9STRA (50S ribosomal protein L3, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPA7_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.970e-50
Identity = 112/164 (68.29%), Postives = 132/164 (80.49%), Query Frame = 0
Query:    1 NNNNAVQIGYLKRQVLKLNKAELGHLTKNGLLPLLYLREYKVPDPTNYSLGQVIDVDYFQIGQFVNVSGKSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXMAGQLGAKKVTISKLEILGIDSKHSLLILKGSVPGKSGNLLNVSPSD 164
            N  NA+Q+GY + +  KL K + GHL K G  PL +LREYKV     + LG+ + VD F+IGQ+VN+SG+SIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXX MAGQ GAKK+TISKL I+GID   +LLI+KG+VPGK GNLLN+  S+
Sbjct:   44 NGYNAIQLGYSQVKPEKLTKPKHGHLKKVGCFPLYHLREYKVSKIDKFLLGETLTVDIFKIGQYVNISGQSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXKMAGQYGAKKITISKLRIIGIDKTRNLLIIKGNVPGKPGNLLNIVGSN 207          
BLAST of mRNA_F-distichus_contig101782.149.1 vs. uniprot
Match: B2XTF5_HETAK (50S ribosomal protein L3, chloroplastic n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTF5_HETAK)

HSP 1 Score: 167 bits (424), Expect = 1.230e-49
Identity = 84/160 (52.50%), Postives = 109/160 (68.12%), Query Frame = 0
Query:    4 NAVQIGYLKRQVLKLNKAELGHLTKNGLLPLLYLREYKVPDPTNYSLGQVIDVDYFQIGQFVNVSGKSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXMAGQLGAKKVTISKLEILGIDSKHSLLILKGSVPGKSGNLLNVSPS 163
            NA+QIG+L +++   NKAE GH TK G  P   L+E+KV    N++LGQ I VD F+IGQFVNV+G+SIGKGFSG QKR+NF RGPMTH                         MAGQ G K VTISKL++L IDSK +LL+LKG++PGK+GN+++++PS
Sbjct:   47 NAIQIGFLAKKIKNTNKAEQGHFTKVGCQPQRILKEFKVESTENFTLGQQIKVDCFEIGQFVNVTGRSIGKGFSGLQKRYNFSRGPMTHGSKNHRLPGSIGAGTTPGRVLPGKKMAGQYGNKNVTISKLKVLNIDSKENLLLLKGAIPGKAGNIVSIAPS 206          
BLAST of mRNA_F-distichus_contig101782.149.1 vs. uniprot
Match: A0A6M3WW27_PTELU (50S ribosomal protein L3, chloroplastic n=1 Tax=Pterocladia lucida TaxID=31408 RepID=A0A6M3WW27_PTELU)

HSP 1 Score: 166 bits (420), Expect = 4.680e-49
Identity = 80/156 (51.28%), Postives = 109/156 (69.87%), Query Frame = 0
Query:    5 AVQIGYLKRQVLKLNKAELGHLTKNGLLPLLYLREYKVPDPTNYSLGQVIDVDYFQIGQFVNVSGKSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXMAGQLGAKKVTISKLEILGIDSKHSLLILKGSVPGKSGNLLNV 160
            A+QIGY+K ++ K+NKAE GHL+K+G  PL YL EYK+  P   +LG+VI V+ FQIGQ VN+SGKSIGKGFSG QKRHNF RGPM+H                         MAG++G +K+TI  L I+ I+++H+L+I+KG+VPGKSGN++++
Sbjct:   48 AIQIGYIKTRIEKMNKAEAGHLSKSGAPPLKYLCEYKINSPEQINLGEVITVEKFQIGQSVNISGKSIGKGFSGYQKRHNFSRGPMSHGSKNHRQPGSIGAGTTPGRVFPGKRMAGRMGGEKITIKNLPIIDINTEHNLIIVKGTVPGKSGNIISI 203          
BLAST of mRNA_F-distichus_contig101782.149.1 vs. uniprot
Match: A0A1L2F1Q4_9PHAE (Ribosomal protein L3 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1Q4_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 7.480e-49
Identity = 110/161 (68.32%), Postives = 124/161 (77.02%), Query Frame = 0
Query:    1 NNNNAVQIGYLKRQVLKLNKAELGHLTKNGLLPLLYLREYKVPDPTNYSLGQVIDVDYFQIGQFVNVSGKSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXMAGQLGAKKVTISKLEILGIDSKHSLLILKGSVPGKSGNLLNVS 161
            N  NAVQIGYLKRQ +++ KAELGHLTKNGL PLL+LREY+VPD  NYSLGQ+               GKSIGKGFSGNQKRH FKRGPMTH   XXXXXXXXXXXXXXXXXXXXXX         +T+SK+++LGID K +LLILKGSVPGKSGNLL++S
Sbjct:   45 NGYNAVQIGYLKRQPIRVKKAELGHLTKNGLPPLLHLREYRVPDLNNYSLGQMXXXXXXXXXXXXXXXGKSIGKGFSGNQKRHKFKRGPMTHGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITVSKVQVLGIDEKQNLLILKGSVPGKSGNLLSIS 205          
BLAST of mRNA_F-distichus_contig101782.149.1 vs. uniprot
Match: A0A514CPW3_9STRA (50S ribosomal protein L3, chloroplastic n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A514CPW3_9STRA)

HSP 1 Score: 161 bits (407), Expect = 4.610e-47
Identity = 82/162 (50.62%), Postives = 103/162 (63.58%), Query Frame = 0
Query:    4 NAVQIGYLKRQVLKLNKAELGHLTKNGLLPLLYLREYKVPDPTNYSLGQVIDVDYFQIGQFVNVSGKSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXMAGQLGAKKVTISKLEILGIDSKHSLLILKGSVPGKSGNLLNVSPSDK 165
            NA+QIGY       L K ELGHL K+ + PL YL+EY   +  +++LG  I+   F+ G +V++SGKSIGKGFSGNQKRHNF RGPMTH                         MAGQLG K  T+SKLE+L IDSK +LLI+KGSVPGK GNLL++ P+ +
Sbjct:   46 NAIQIGYQNSSTKHLTKPELGHLKKSQIQPLRYLKEYXXXEVNDFTLGXXINXQNFKEGDYVDISGKSIGKGFSGNQKRHNFSRGPMTHGSKNHREPGSIGQGSTPGRVFPGKKMAGQLGGKTTTVSKLEVLKIDSKENLLIVKGSVPGKPGNLLSIKPTKR 207          
BLAST of mRNA_F-distichus_contig101782.149.1 vs. uniprot
Match: UPI001EF2FE6F (50S ribosomal protein L3 n=1 Tax=Spirulina major TaxID=270636 RepID=UPI001EF2FE6F)

HSP 1 Score: 158 bits (400), Expect = 4.550e-46
Identity = 90/160 (56.25%), Postives = 119/160 (74.38%), Query Frame = 0
Query:    5 AVQIGYLKRQVLKLNKAELGHLTKNGLLPLLYLREYKVPDPTNYSLGQVIDVDYFQIGQFVNVSGKSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXMAGQLGAKKVTISKLEILGIDSKHSLLILKGSVPGKSGNLLNVSPSD 164
            +VQIGY + +   +NK ELGHL K+G  PL +L+EY V +P +Y LGQ +  D F  GQ V+VSGKSIG+GFSG QKRHNF+RGPM+H            XXXXXXXXXXXX MAG+ G KKVT+ KLEI+ +D++ +LL++KG++PGK+GNLL +SP++
Sbjct:   38 SVQIGYDEVKPKIINKPELGHLAKSGASPLRHLKEYHVDNPDSYELGQTVKADIFTPGQLVDVSGKSIGRGFSGYQKRHNFRRGPMSHGSKNHREPGSTGXXXXXXXXXXXXKMAGRYGGKKVTVRKLEIVQVDAERNLLLIKGAIPGKTGNLLTISPAN 197          
BLAST of mRNA_F-distichus_contig101782.149.1 vs. uniprot
Match: A0A0K1DC17_PSEMU (50S ribosomal protein L3, chloroplastic n=9 Tax=Bacillariaceae TaxID=33852 RepID=A0A0K1DC17_PSEMU)

HSP 1 Score: 155 bits (392), Expect = 1.140e-44
Identity = 74/161 (45.96%), Postives = 106/161 (65.84%), Query Frame = 0
Query:    4 NAVQIGYLKRQVLKLNKAELGHLTKNGLLPLLYLREYKVPDPTNYSLGQVIDVDYFQIGQFVNVSGKSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXMAGQLGAKKVTISKLEILGIDSKHSLLILKGSVPGKSGNLLNVSPSD 164
            NA+Q+GY       L ++ELGHL K+ + PL YL+E++VP+  ++ +GQV++VD   + Q VN+ GK++GKGFSG QKRHNF RGPMTH                         MAGQLG K  TI KL+++ ++S+ ++LI+KGSVPGK GNLL+++PS+
Sbjct:   58 NAIQVGYSNTSNKSLTQSELGHLQKSNIQPLKYLKEFRVPNVDDFEVGQVLNVDLLSVDQLVNIKGKTVGKGFSGLQKRHNFTRGPMTHGSKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKLTTIKKLKVIQLNSEENILIIKGSVPGKPGNLLSITPSN 218          
BLAST of mRNA_F-distichus_contig101782.149.1 vs. uniprot
Match: A0A514CPP1_9STRA (50S ribosomal protein L3, chloroplastic n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A514CPP1_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.820e-44
Identity = 80/160 (50.00%), Postives = 104/160 (65.00%), Query Frame = 0
Query:    5 AVQIGYLKRQVLKLNKAELGHLTKNGLLPLLYLREYKVPDPTNYSLGQVIDVDYFQIGQFVNVSGKSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXMAGQLGAKKVTISKLEILGIDSKHSLLILKGSVPGKSGNLLNVSPSD 164
            A+Q+GY +    K  K ELGHL K  L  L YL+EY + +  ++ LGQ+IDV  F+ G+FV+V+GKSIGKGF+GNQKRH+F RGPM+H                         MAG LGA  VTI KL+IL +D+K +LLILKGSVPGK GNLL++ P++
Sbjct:   48 ALQLGYHEVPTRKCTKPELGHLNKANLASLKYLKEYLINNVEDFQLGQIIDVQTFKEGEFVDVTGKSIGKGFAGNQKRHHFTRGPMSHGSKNHRAPGSIGQGTTPGRVYPGKKMAGHLGASTVTIKKLKILKVDTKQNLLILKGSVPGKPGNLLSIRPTN 207          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101782.149.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1GJT2_FUCVE2.720e-8797.5950S ribosomal protein L3, chloroplastic n=3 Tax=Fu... [more]
A0A8F0JYJ1_9PHAE5.210e-5673.78Ribosomal protein L3 n=1 Tax=Chorda asiatica TaxID... [more]
A0A7S6ZPA7_9STRA2.970e-5068.2950S ribosomal protein L3, chloroplastic n=1 Tax=Sc... [more]
B2XTF5_HETAK1.230e-4952.5050S ribosomal protein L3, chloroplastic n=3 Tax=He... [more]
A0A6M3WW27_PTELU4.680e-4951.2850S ribosomal protein L3, chloroplastic n=1 Tax=Pt... [more]
A0A1L2F1Q4_9PHAE7.480e-4968.32Ribosomal protein L3 n=1 Tax=Coccophora langsdorfi... [more]
A0A514CPW3_9STRA4.610e-4750.6250S ribosomal protein L3, chloroplastic n=1 Tax=Rh... [more]
UPI001EF2FE6F4.550e-4656.2550S ribosomal protein L3 n=1 Tax=Spirulina major T... [more]
A0A0K1DC17_PSEMU1.140e-4445.9650S ribosomal protein L3, chloroplastic n=9 Tax=Ba... [more]
A0A514CPP1_9STRA1.820e-4450.0050S ribosomal protein L3, chloroplastic n=1 Tax=Di... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019927Ribosomal protein L3, bacterial/organelle-typeTIGRFAMTIGR03625TIGR03625coord: 3..160
e-value: 5.4E-56
score: 187.6
IPR019927Ribosomal protein L3, bacterial/organelle-typePANTHERPTHR1122950S RIBOSOMAL PROTEIN L3coord: 3..163
NoneNo IPR availableGENE3D2.40.30.10coord: 83..165
e-value: 3.2E-10
score: 41.7
NoneNo IPR availableGENE3D2.40.50.620coord: 1..52
e-value: 4.7E-6
score: 28.7
NoneNo IPR availablePANTHERPTHR11229:SF14coord: 3..163
IPR000597Ribosomal protein L3PFAMPF00297Ribosomal_L3coord: 57..138
e-value: 4.5E-12
score: 45.6
IPR019926Ribosomal protein L3, conserved sitePROSITEPS00474RIBOSOMAL_L3coord: 59..82
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 2..163

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019927Ribosomal protein L3, bacterial/organelle-typeTIGRFAMTIGR03625TIGR03625coord: 3..160
e-value: 5.4E-56
score: 187.6
IPR019927Ribosomal protein L3, bacterial/organelle-typePANTHERPTHR1122950S RIBOSOMAL PROTEIN L3coord: 3..163
NoneNo IPR availableGENE3D2.40.30.10coord: 83..165
e-value: 3.2E-10
score: 41.7
NoneNo IPR availableGENE3D2.40.50.620coord: 1..52
e-value: 4.7E-6
score: 28.7
NoneNo IPR availablePANTHERPTHR11229:SF14coord: 3..163
IPR000597Ribosomal protein L3PFAMPF00297Ribosomal_L3coord: 57..138
e-value: 4.5E-12
score: 45.6
IPR019926Ribosomal protein L3, conserved sitePROSITEPS00474RIBOSOMAL_L3coord: 59..82
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 2..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101782contigF-distichus_contig101782:1442..1942 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101782.149.1mRNA_F-distichus_contig101782.149.1Fucus distichus monoicousmRNAF-distichus_contig101782 1442..1942 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig101782.149.1 ID=prot_F-distichus_contig101782.149.1|Name=mRNA_F-distichus_contig101782.149.1|organism=Fucus distichus monoicous|type=polypeptide|length=167bp
NNNNAVQIGYLKRQVLKLNKAELGHLTKNGLLPLLYLREYKVPDPTNYSL
GQVIDVDYFQIGQFVNVSGKSIGKGFSGNQKRHNFKRGPMTHGSKNHKAP
GSIGPGTTPGRVFPGKRMAGQLGAKKVTISKLEILGIDSKHSLLILKGSV
PGKSGNLLNVSPSDKF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019927Ribosomal_L3_bac/org-type
IPR000597Ribosomal_L3
IPR019926Ribosomal_L3_CS
IPR009000Transl_B-barrel_sf