prot_F-distichus_contig101454.115.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig101454.115.1
Unique Nameprot_F-distichus_contig101454.115.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length93
Homology
BLAST of mRNA_F-distichus_contig101454.115.1 vs. uniprot
Match: A0A6H5JB60_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB60_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 4.040e-46
Identity = 74/89 (83.15%), Postives = 83/89 (93.26%), Query Frame = 0
Query:    5 DGERCSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLDEEKRLR 93
            DGERCSICLDPWTSKGKHRICTL CGHLFG++CIERWL+ERRSCPQCGAKVG+KG++R+IPLFL NL A+DTGELETA   L+EEKRLR
Sbjct:  116 DGERCSICLDPWTSKGKHRICTLLCGHLFGQSCIERWLKERRSCPQCGAKVGAKGTNRIIPLFLQNLVAQDTGELETARTLLEEEKRLR 204          
BLAST of mRNA_F-distichus_contig101454.115.1 vs. uniprot
Match: D8LKW0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW0_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 8.230e-46
Identity = 73/89 (82.02%), Postives = 82/89 (92.13%), Query Frame = 0
Query:    5 DGERCSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLDEEKRLR 93
            DGERCSICLDPWTSKGKHRICTL CGHLFG++CIERWL+ERRSCPQCG KVG+KG++R+IPLFL NL A+DTGELETA   L+EEKRLR
Sbjct:   41 DGERCSICLDPWTSKGKHRICTLLCGHLFGQSCIERWLKERRSCPQCGTKVGAKGTNRIIPLFLHNLVAQDTGELETARTLLEEEKRLR 129          
BLAST of mRNA_F-distichus_contig101454.115.1 vs. uniprot
Match: A0A267GDQ9_9PLAT (RING-type domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267GDQ9_9PLAT)

HSP 1 Score: 108 bits (270), Expect = 3.980e-26
Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = 0
Query:    1 PLPQDGERCSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLDEEKR 91
            P P D E C+IC +PWTS G+HR+C L CGHLFGK+C+ERWLE R+ CPQC         H V+PL+++NL A D  E E   + +D+ KR
Sbjct:  240 PQPAD-EGCTICFEPWTSSGEHRVCALRCGHLFGKSCVERWLETRQQCPQCNRNCRR---HEVLPLYVTNLRAVDNSENEALKLEIDKIKR 326          
BLAST of mRNA_F-distichus_contig101454.115.1 vs. uniprot
Match: A0A1I8IIU3_9PLAT (RING-type domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8IIU3_9PLAT)

HSP 1 Score: 108 bits (270), Expect = 1.180e-25
Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = 0
Query:    1 PLPQDGERCSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLDEEKR 91
            P P D E C+IC +PWTS G+HR+C L CGHLFGK+C+ERWLE R+ CPQC         H V+PL+++NL A D  E E   + +D+ KR
Sbjct:  240 PQPAD-EGCTICFEPWTSSGEHRVCALRCGHLFGKSCVERWLETRQQCPQCNRNCRR---HEVLPLYVTNLRAVDNSENEALKLEIDKIKR 326          
BLAST of mRNA_F-distichus_contig101454.115.1 vs. uniprot
Match: A0A267DN52_9PLAT (RING-type domain-containing protein n=4 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267DN52_9PLAT)

HSP 1 Score: 108 bits (270), Expect = 1.570e-25
Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = 0
Query:    1 PLPQDGERCSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLDEEKR 91
            P P D E C+IC +PWTS G+HR+C L CGHLFGK+C+ERWLE R+ CPQC         H V+PL+++NL A D  E E   + +D+ KR
Sbjct:  240 PQPAD-EGCTICFEPWTSSGEHRVCALRCGHLFGKSCVERWLETRQQCPQCNRNCRR---HEVLPLYVTNLRAVDNSENEALKLEIDKIKR 326          
BLAST of mRNA_F-distichus_contig101454.115.1 vs. uniprot
Match: A0A8C4NA14_EPTBU (Ring finger and WD repeat domain 3 n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4NA14_EPTBU)

HSP 1 Score: 94.4 bits (233), Expect = 1.540e-20
Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 0
Query:    4 QDGERCSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLDEEKRLR 93
            ++ + CSICL+PWT+ G HR+C L CGH+FG AC+ RW    + CPQC  +        V P+++S L A DT ELE+    L++E+ LR
Sbjct:  133 EESDICSICLEPWTNVGPHRMCNLRCGHVFGHACVMRWFTTSKKCPQCNQRAKKSD---VRPVYVSTLRAIDTVELESLKRELEQERELR 219          
BLAST of mRNA_F-distichus_contig101454.115.1 vs. uniprot
Match: A0A3M7Q7N5_BRAPC (E3 ubiquitin-ligase RFWD3 n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7Q7N5_BRAPC)

HSP 1 Score: 91.7 bits (226), Expect = 1.340e-19
Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = 0
Query:    7 ERCSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLDEEKRLR 93
            E CSICL+PWT+ G HR+  L CGHLFG+ACIERWL+    CPQC  +       R+   +  +L   DT EL+ A+  L+ EK+LR
Sbjct:   99 ETCSICLEPWTNSGAHRLVCLKCGHLFGEACIERWLKTVPKCPQCNRQSKRTDIRRI---YAKSLKVIDTAELDKALKDLENEKQLR 182          
BLAST of mRNA_F-distichus_contig101454.115.1 vs. uniprot
Match: L8GV33_ACACA (Zinc finger, C3HC4 type (RING finger) domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GV33_ACACA)

HSP 1 Score: 90.1 bits (222), Expect = 4.760e-19
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    2 LPQDGERCSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGE 78
            LP+   +C+ICLD W S G H+IC+L CGHLFG++CIE+WL   + CP C AK   + SH + PLF+ +L   D  E
Sbjct:   30 LPESASQCTICLDSWQSSGPHKICSLKCGHLFGRSCIEKWLRNNKLCPMCKAKA--QRSH-IRPLFVQHLIVVDNTE 103          
BLAST of mRNA_F-distichus_contig101454.115.1 vs. uniprot
Match: A0A5A9PPE2_9TELE (E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9PPE2_9TELE)

HSP 1 Score: 90.1 bits (222), Expect = 4.780e-19
Identity = 43/90 (47.78%), Postives = 53/90 (58.89%), Query Frame = 0
Query:    4 QDGERCSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLDEEKRLR 93
            ++GE CSIC +PWT+ G HR+  L CGHLFG  CI+RWL E   CPQC  K   K  H +I L+   L A D  E       L+ E+RLR
Sbjct:  177 EEGETCSICFEPWTTAGNHRLAALRCGHLFGHECIKRWLVEGNKCPQCNKKA--KRDH-IIFLYARRLKALDNTESVQLKKSLENEQRLR 263          
BLAST of mRNA_F-distichus_contig101454.115.1 vs. uniprot
Match: A0A813Y3E3_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813Y3E3_9BILA)

HSP 1 Score: 89.7 bits (221), Expect = 6.370e-19
Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = 0
Query:    5 DGERCSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLDEEKRLR 93
            D E CSICL+PWT+ G HR+  L CGHLFG+ CIERWL+    CPQC          R+   +   L   DT EL+ A+  L++E++LR
Sbjct:   91 DEETCSICLEPWTNSGIHRLVCLKCGHLFGEGCIERWLKTNPKCPQCNRPSKRSDIRRI---YARALKVIDTAELDKALKDLEDERQLR 176          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101454.115.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JB60_9PHAE4.040e-4683.15RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LKW0_ECTSI8.230e-4682.02RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A267GDQ9_9PLAT3.980e-2651.65RING-type domain-containing protein n=1 Tax=Macros... [more]
A0A1I8IIU3_9PLAT1.180e-2551.65RING-type domain-containing protein n=1 Tax=Macros... [more]
A0A267DN52_9PLAT1.570e-2551.65RING-type domain-containing protein n=4 Tax=Macros... [more]
A0A8C4NA14_EPTBU1.540e-2044.44Ring finger and WD repeat domain 3 n=2 Tax=Eptatre... [more]
A0A3M7Q7N5_BRAPC1.340e-1948.28E3 ubiquitin-ligase RFWD3 n=1 Tax=Brachionus plica... [more]
L8GV33_ACACA4.760e-1949.35Zinc finger, C3HC4 type (RING finger) domain conta... [more]
A0A5A9PPE2_9TELE4.780e-1947.78E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Triploph... [more]
A0A813Y3E3_9BILA6.370e-1946.07Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 9..51
e-value: 1.2E-4
score: 31.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 8..51
e-value: 1.9E-11
score: 44.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 9..51
score: 11.737
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 3..91
e-value: 8.0E-17
score: 63.6
IPR037381E3 ubiquitin-protein ligase RFWD3PANTHERPTHR16047RFWD3 PROTEINcoord: 6..89
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 5..58

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 9..51
e-value: 1.2E-4
score: 31.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 8..51
e-value: 1.9E-11
score: 44.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 9..51
score: 11.737
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 3..91
e-value: 8.0E-17
score: 63.6
IPR037381E3 ubiquitin-protein ligase RFWD3PANTHERPTHR16047RFWD3 PROTEINcoord: 6..89
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 5..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101454contigF-distichus_contig101454:289..1158 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101454.115.1mRNA_F-distichus_contig101454.115.1Fucus distichus monoicousmRNAF-distichus_contig101454 289..1158 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig101454.115.1 ID=prot_F-distichus_contig101454.115.1|Name=mRNA_F-distichus_contig101454.115.1|organism=Fucus distichus monoicous|type=polypeptide|length=93bp
PLPQDGERCSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQ
CGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLDEEKRLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR037381RFWD3