prot_F-distichus_contig101382.109.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig101382.109.1
Unique Nameprot_F-distichus_contig101382.109.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length66
Homology
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: D7G6X7_ECTSI (Chloroplast 50S ribosomal protein 17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6X7_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 4.880e-32
Identity = 58/65 (89.23%), Postives = 62/65 (95.38%), Query Frame = 0
Query:    1 MVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRYK 65
            MVTSFIYHERIRTTVPRAKELRK+ADNMVTLAKKGT HHQRQA+ VVRE+ AVVKLFE+LGPRYK
Sbjct:   24 MVTSFIYHERIRTTVPRAKELRKVADNMVTLAKKGTPHHQRQAQGVVRENAAVVKLFEVLGPRYK 88          
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: A0A812VM99_SYMMI (RplQ protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VM99_SYMMI)

HSP 1 Score: 90.5 bits (223), Expect = 2.870e-22
Identity = 45/65 (69.23%), Postives = 52/65 (80.00%), Query Frame = 0
Query:    1 MVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRYK 65
            MVTS IYHERI TT  RAKELR++A+ M+T AKKG LH +R A  VVRE  AVVKLF++LGPRYK
Sbjct:    1 MVTSLIYHERIMTTTARAKELRRVAEKMITKAKKGDLHSRRLAAGVVRERAAVVKLFDILGPRYK 65          
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: A0A7S0ASE6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASE6_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 6.880e-20
Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = 0
Query:    1 MVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRYK 65
            MVTS I HERI TT+P+AKELRKLAD MV L K G+LH +RQA AV+RE   + KLFE+LGPRY+
Sbjct:   62 MVTSLIKHERIVTTLPKAKELRKLADKMVGLGKSGSLHSRRQAGAVIRERPVLTKLFEILGPRYE 126          
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: A0A7S3PMY3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PMY3_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.730e-19
Identity = 42/64 (65.62%), Postives = 55/64 (85.94%), Query Frame = 0
Query:    1 MVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRY 64
            MVTS I++ERI+TTVP+AKELR++AD MVTL KKG+LH +RQ+  VVR+  A+ KLF++LGPRY
Sbjct:   24 MVTSLIHYERIKTTVPKAKELRRVADWMVTLGKKGSLHARRQSLKVVRDKAAMHKLFDVLGPRY 87          
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: A0A7S3QJX6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJX6_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 3.630e-19
Identity = 42/65 (64.62%), Postives = 52/65 (80.00%), Query Frame = 0
Query:    1 MVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRYK 65
            MVTS IYHERI TTVP+AKE+R LA+ ++  AK G+LH +R A+ VVRE  AV KLFE+LGPRY+
Sbjct:   24 MVTSLIYHERIVTTVPKAKEVRHLAEKIIKHAKNGSLHSRRLADKVVREEPAVTKLFEVLGPRYQ 88          
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: A0A7S2LPJ0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LPJ0_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 7.640e-19
Identity = 40/64 (62.50%), Postives = 52/64 (81.25%), Query Frame = 0
Query:    1 MVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRY 64
            MVTS IYHERI TT P+AKEL++LA+ M+   K G+LH +RQA+A++RE  A+ KLFE+LGPRY
Sbjct:   24 MVTSLIYHERIVTTTPKAKELKRLAEWMIGFGKDGSLHARRQADAILREKPALTKLFEVLGPRY 87          
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: UPI00127E525F (50S ribosomal protein L17 n=1 Tax=Desulfuromonas sp. AOP6 TaxID=1566351 RepID=UPI00127E525F)

HSP 1 Score: 83.2 bits (204), Expect = 1.160e-18
Identity = 41/65 (63.08%), Postives = 51/65 (78.46%), Query Frame = 0
Query:    1 MVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRYK 65
            MVTS I HE+I TT  RAKELRK+A+ M+TL K+G LH +RQA AV+RE  AV KLF+++ PRYK
Sbjct:   24 MVTSLIMHEKITTTDARAKELRKIAEKMITLGKRGDLHARRQALAVIRERKAVAKLFDMVAPRYK 88          
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: A0A835Z8L6_9STRA (Chloroplast 50S ribosomal protein 17 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L6_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.010e-18
Identity = 40/65 (61.54%), Postives = 53/65 (81.54%), Query Frame = 0
Query:    1 MVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRYK 65
            MVTS I HERI+TTVP+AK L+ LAD MVT AK GTLH +R A++ +++ GA+ KLF++LGPRY+
Sbjct:   27 MVTSLITHERIKTTVPKAKNLKVLADQMVTHAKTGTLHSRRLAQSTIQDKGALDKLFKVLGPRYE 91          
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: A0A7R9W6F4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6F4_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.750e-18
Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 0
Query:    1 MVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRY 64
            M TS I HERI TTV +AKELRKLADN++   KKGT+  +RQA A++RE   V KLFE+LGPRY
Sbjct:   24 MATSLIKHERIVTTVAKAKELRKLADNLIGFGKKGTVQARRQANAIIREKPMVTKLFEVLGPRY 87          
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: A0A8J6UKX6_9DELT (50S ribosomal protein L17 n=1 Tax=Pelovirga terrestris TaxID=2771352 RepID=A0A8J6UKX6_9DELT)

HSP 1 Score: 81.3 bits (199), Expect = 4.820e-18
Identity = 40/64 (62.50%), Postives = 50/64 (78.12%), Query Frame = 0
Query:    1 MVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRY 64
            MVTSF  +E+I TTV RAKELRKLA+ M+TLAK+G LH +RQA  V+RE   V +LFE++ PRY
Sbjct:   24 MVTSFFQNEKITTTVTRAKELRKLAEKMITLAKRGDLHSRRQAMRVIREPKVVARLFEMIAPRY 87          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6X7_ECTSI4.880e-3289.23Chloroplast 50S ribosomal protein 17 n=2 Tax=Ectoc... [more]
A0A812VM99_SYMMI2.870e-2269.23RplQ protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A7S0ASE6_9STRA6.880e-2067.69Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A7S3PMY3_9STRA1.730e-1965.63Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S3QJX6_9STRA3.630e-1964.62Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2LPJ0_9STRA7.640e-1962.50Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
UPI00127E525F1.160e-1863.0850S ribosomal protein L17 n=1 Tax=Desulfuromonas s... [more]
A0A835Z8L6_9STRA2.010e-1861.54Chloroplast 50S ribosomal protein 17 n=1 Tax=Tribo... [more]
A0A7R9W6F4_9STRA3.750e-1864.06Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A8J6UKX6_9DELT4.820e-1862.5050S ribosomal protein L17 n=1 Tax=Pelovirga terres... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000456Ribosomal protein L17PFAMPF01196Ribosomal_L17coord: 1..65
e-value: 1.6E-17
score: 64.1
IPR000456Ribosomal protein L17PANTHERPTHR14413RIBOSOMAL PROTEIN L17coord: 1..65
IPR000456Ribosomal protein L17PROSITEPS01167RIBOSOMAL_L17coord: 11..33
IPR036373Ribosomal protein L17 superfamilyGENE3D3.90.1030.10coord: 1..65
e-value: 3.4E-20
score: 74.3
IPR036373Ribosomal protein L17 superfamilySUPERFAMILY64263Prokaryotic ribosomal protein L17coord: 1..65
NoneNo IPR availablePANTHERPTHR14413:SF1639S RIBOSOMAL PROTEIN L17, MITOCHONDRIALcoord: 1..65

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000456Ribosomal protein L17PFAMPF01196Ribosomal_L17coord: 1..65
e-value: 1.6E-17
score: 64.1
IPR000456Ribosomal protein L17PANTHERPTHR14413RIBOSOMAL PROTEIN L17coord: 1..65
IPR000456Ribosomal protein L17PROSITEPS01167RIBOSOMAL_L17coord: 11..33
IPR036373Ribosomal protein L17 superfamilyGENE3D3.90.1030.10coord: 1..65
e-value: 3.4E-20
score: 74.3
IPR036373Ribosomal protein L17 superfamilySUPERFAMILY64263Prokaryotic ribosomal protein L17coord: 1..65
NoneNo IPR availablePANTHERPTHR14413:SF1639S RIBOSOMAL PROTEIN L17, MITOCHONDRIALcoord: 1..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101382contigF-distichus_contig101382:722..1582 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101382.109.1mRNA_F-distichus_contig101382.109.1Fucus distichus monoicousmRNAF-distichus_contig101382 710..1582 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig101382.109.1 ID=prot_F-distichus_contig101382.109.1|Name=mRNA_F-distichus_contig101382.109.1|organism=Fucus distichus monoicous|type=polypeptide|length=66bp
MVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREH
GAVVKLFELLGPRYK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000456Ribosomal_L17
IPR036373Ribosomal_L17_sf