mRNA_F-distichus_contig101382.109.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: D7G6X7_ECTSI (Chloroplast 50S ribosomal protein 17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6X7_ECTSI) HSP 1 Score: 121 bits (303), Expect = 1.230e-33 Identity = 60/69 (86.96%), Postives = 65/69 (94.20%), Query Frame = 1
Query: 1 LFRNMVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRYK 207
+ RNMVTSFIYHERIRTTVPRAKELRK+ADNMVTLAKKGT HHQRQA+ VVRE+ AVVKLFE+LGPRYK
Sbjct: 20 MLRNMVTSFIYHERIRTTVPRAKELRKVADNMVTLAKKGTPHHQRQAQGVVRENAAVVKLFEVLGPRYK 88
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: A0A812VM99_SYMMI (RplQ protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VM99_SYMMI) HSP 1 Score: 89.7 bits (221), Expect = 6.810e-22 Identity = 45/65 (69.23%), Postives = 52/65 (80.00%), Query Frame = 1
Query: 13 MVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRYK 207
MVTS IYHERI TT RAKELR++A+ M+T AKKG LH +R A VVRE AVVKLF++LGPRYK
Sbjct: 1 MVTSLIYHERIMTTTARAKELRRVAEKMITKAKKGDLHSRRLAAGVVRERAAVVKLFDILGPRYK 65
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: A0A7S0ASE6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASE6_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.860e-21 Identity = 46/69 (66.67%), Postives = 55/69 (79.71%), Query Frame = 1
Query: 1 LFRNMVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRYK 207
+ RNMVTS I HERI TT+P+AKELRKLAD MV L K G+LH +RQA AV+RE + KLFE+LGPRY+
Sbjct: 58 MLRNMVTSLIKHERIVTTLPKAKELRKLADKMVGLGKSGSLHSRRQAGAVIRERPVLTKLFEILGPRYE 126
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: A0A7S3PMY3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PMY3_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 4.440e-21 Identity = 44/68 (64.71%), Postives = 58/68 (85.29%), Query Frame = 1
Query: 1 LFRNMVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRY 204
+ RNMVTS I++ERI+TTVP+AKELR++AD MVTL KKG+LH +RQ+ VVR+ A+ KLF++LGPRY
Sbjct: 20 MLRNMVTSLIHYERIKTTVPKAKELRRVADWMVTLGKKGSLHARRQSLKVVRDKAAMHKLFDVLGPRY 87
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: A0A7S3QJX6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJX6_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 9.360e-21 Identity = 44/69 (63.77%), Postives = 55/69 (79.71%), Query Frame = 1
Query: 1 LFRNMVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRYK 207
+ RNMVTS IYHERI TTVP+AKE+R LA+ ++ AK G+LH +R A+ VVRE AV KLFE+LGPRY+
Sbjct: 20 MLRNMVTSLIYHERIVTTVPKAKEVRHLAEKIIKHAKNGSLHSRRLADKVVREEPAVTKLFEVLGPRYQ 88
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: A0A7S2LPJ0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LPJ0_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.970e-20 Identity = 42/68 (61.76%), Postives = 55/68 (80.88%), Query Frame = 1
Query: 1 LFRNMVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRY 204
+ RNMVTS IYHERI TT P+AKEL++LA+ M+ K G+LH +RQA+A++RE A+ KLFE+LGPRY
Sbjct: 20 MLRNMVTSLIYHERIVTTTPKAKELKRLAEWMIGFGKDGSLHARRQADAILREKPALTKLFEVLGPRY 87
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: UPI00127E525F (50S ribosomal protein L17 n=1 Tax=Desulfuromonas sp. AOP6 TaxID=1566351 RepID=UPI00127E525F) HSP 1 Score: 87.4 bits (215), Expect = 3.000e-20 Identity = 43/69 (62.32%), Postives = 54/69 (78.26%), Query Frame = 1
Query: 1 LFRNMVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRYK 207
+ RNMVTS I HE+I TT RAKELRK+A+ M+TL K+G LH +RQA AV+RE AV KLF+++ PRYK
Sbjct: 20 MMRNMVTSLIMHEKITTTDARAKELRKIAEKMITLGKRGDLHARRQALAVIRERKAVAKLFDMVAPRYK 88
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: A0A832EIK2_9DELT (50S ribosomal protein L17 n=1 Tax=Desulfacinum infernum TaxID=35837 RepID=A0A832EIK2_9DELT) HSP 1 Score: 86.7 bits (213), Expect = 3.550e-20 Identity = 44/69 (63.77%), Postives = 54/69 (78.26%), Query Frame = 1
Query: 1 LFRNMVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRYK 207
+FRNMVTS + HERI TTVP+AKE+R+ AD+M+TL K+G LH +RQA AVVR V KLF LGPRY+
Sbjct: 20 MFRNMVTSLLEHERIVTTVPKAKEIRRWADSMITLGKRGDLHARRQALAVVRRKDVVHKLFAELGPRYQ 88
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: UPI0019A40A4D (50S ribosomal protein L17 n=1 Tax=Terasakiella brassicae TaxID=1634917 RepID=UPI0019A40A4D) HSP 1 Score: 85.9 bits (211), Expect = 8.740e-20 Identity = 40/69 (57.97%), Postives = 54/69 (78.26%), Query Frame = 1
Query: 1 LFRNMVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRYK 207
LF NM + I HE+I+TT+P+AK+LR +AD M+TL K+G LH +RQA A +R+ AV KLF++LGPRYK
Sbjct: 20 LFANMAVALITHEQIKTTLPKAKDLRSIADKMITLGKRGDLHARRQAMATLRDEAAVKKLFDVLGPRYK 88
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Match: A0A7R9W6F4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6F4_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 9.890e-20 Identity = 43/68 (63.24%), Postives = 52/68 (76.47%), Query Frame = 1
Query: 1 LFRNMVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHGAVVKLFELLGPRY 204
+ RNM TS I HERI TTV +AKELRKLADN++ KKGT+ +RQA A++RE V KLFE+LGPRY
Sbjct: 20 MLRNMATSLIKHERIVTTVAKAKELRKLADNLIGFGKKGTVQARRQANAIIREKPMVTKLFEVLGPRY 87 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101382.109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig101382.109.1 >prot_F-distichus_contig101382.109.1 ID=prot_F-distichus_contig101382.109.1|Name=mRNA_F-distichus_contig101382.109.1|organism=Fucus distichus monoicous|type=polypeptide|length=66bp MVTSFIYHERIRTTVPRAKELRKLADNMVTLAKKGTLHHQRQAEAVVREHback to top mRNA from alignment at F-distichus_contig101382:710..1582+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig101382.109.1 ID=mRNA_F-distichus_contig101382.109.1|Name=mRNA_F-distichus_contig101382.109.1|organism=Fucus distichus monoicous|type=mRNA|length=873bp|location=Sequence derived from alignment at F-distichus_contig101382:710..1582+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig101382:710..1582+ >mRNA_F-distichus_contig101382.109.1 ID=mRNA_F-distichus_contig101382.109.1|Name=mRNA_F-distichus_contig101382.109.1|organism=Fucus distichus monoicous|type=CDS|length=396bp|location=Sequence derived from alignment at F-distichus_contig101382:710..1582+ (Fucus distichus monoicous)back to top |