prot_F-distichus_contig1013.102.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig1013.102.1
Unique Nameprot_F-distichus_contig1013.102.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length345
Homology
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 1.090e-48
Identity = 115/369 (31.17%), Postives = 188/369 (50.95%), Query Frame = 0
Query:    3 RLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGY-------TGCVESANALKGGRTAEPGGEGRNEEVSVPGGSGGAYVDGDEETSGHCVR-----------RTR---------CSKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYG-GQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 343
            +LNK++YGL QA R W   L   +  +GF Q   D CVFR + EG   + +VVHVDDI +  +++    +F  +L     ++++GD  +Y G         G ++ +            G    +E+ +P G   +  D DEE      R           +TR          ++    P   H +A +  L Y++   + GIT+  G   GL +E + D+++ +    RRSVSG ++M   G ISW  R Q+     T+E +YV+ ++V+KE+LFLRQV  FM P   +  + VF+DN+G I+LA N I++  +KHID +HH +R+    +++ +  V S  Q+AD L K L    F+ H  +++++
Sbjct:   70 KLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 437          
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 1.290e-48
Identity = 122/375 (32.53%), Postives = 184/375 (49.07%), Query Frame = 0
Query:    3 RLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGYTGCVESANALKGGRT-----------AEPGGEGRNEEVSVPGGSGGAYVDGDEE---------------------TSGHCVRRTRC-SKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYG-GQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 343
            +L K++YGL QA R W   L   +  +GFEQ   D CVFR + +G   +++VVHVDDI A   ++    +F A+L +   ++++G+  +Y   +GC    N   G  T           AE G  G     SVP  SG    D D +                     T        R  ++    P   H  A +  L Y       GI++  G   G  ++ Y D++F +    RRSVSG ++    GA+SW  R Q+     T+E +YVA  +VVKE+LFLRQ+  FM P + +  + VF+DN+G I+LA N I++  +KHID +HH +R+  + +++ V  V S  Q AD L K L    F+ H  F++N+
Sbjct:   94 KLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWY---SGCFYERNKETGRLTISQQTFTDELAAEYGVVGGR---SVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 461          
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5KCN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN6_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 4.770e-48
Identity = 120/370 (32.43%), Postives = 189/370 (51.08%), Query Frame = 0
Query:    3 RLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGYTGCVESANAL-KGGRTA--EPGGEGRNEEVSVPGGSGGAYVDGD-------EETSGHCVRRT-------------------RCSKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYGGQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 343
            ++ +A+YGL Q+GR W  +  D + + G+EQ + DPC+FRKVV+GE   ++V++VDDI+  A ++       A L ++F ++D+GD  +Y G    V+  N   K  +TA  E      N   + P     A VD D       E +    VR T                   +  K+   P      A+V+ + YL   K+ GITY  +G GL ++ + DS++      RRS +G  + +    +    + Q VTA  T+E +Y+A  E VKE LF+R V  F+ P    + + V +DNEG + L  N  +S R+KHID + H +R+   A K+    V +E+Q+AD+L K LG  K + H K ++N+
Sbjct:   47 KVERALYGLKQSGREWGFEAADALISNGYEQCRVDPCIFRKVVDGEVVGLIVIYVDDIMLSATEEERE-ELLASLQKRFPVKDLGDCTWYDGCAIEVDLENGTTKLSQTAYIESMLNRFNVTTTAP---TPAVVDDDLGPKRDDESSVDKPVRETIGCLMWLLFMRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITYV-RGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVLSFIAPETSGATIRVLEDNEGALALVQNPFSSARSKHIDVRFHFIRELFKAGKITADYVSTEEQHADMLTKVLGRGKLEYHRKALMNL 411          
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 2.310e-47
Identity = 115/369 (31.17%), Postives = 188/369 (50.95%), Query Frame = 0
Query:    3 RLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGY-------TGCVESANALKGGRTAEPGGEGRNEEVSVPGGSGGAYVDGDEETSGHCVR-----------RTR---------CSKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYG-GQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 343
            +LNK++YGL QA R W   L   +  +GF Q   D CVFR + EG   + +VVHVDDI +  +++    +F  +L     ++++GD  +Y G         G ++ +            G    +E+ +P G   +  D DEE      R           +TR          ++    P   H +A +  L Y++   + GIT+  G   GL +E + D+++ +    RRSVSG ++M   G ISW  R Q+     T+E +YV+ ++V+KE+LFLRQV  FM P   +  + VF+DN+G I+LA N I++  +KHID +HH +R+    +++ +  V S  Q+AD L K L    F+ H  +++++
Sbjct:  244 KLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 611          
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 1.390e-46
Identity = 123/375 (32.80%), Postives = 187/375 (49.87%), Query Frame = 0
Query:    3 RLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGYTGCVESANALKGGRT-----------AEPGGEGRNEEVSVPGGSGGAY--VDGDEETSGHCVR-----------RTR---------CSKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYG-GQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 343
            +L K++YGL QA R W   L   +  +GFEQ   D CVFR + +G   +++VVHVDDI A   ++    +F A+L +   ++++G+  +Y   +GC    N   G  T           AE G  G     SVP  SG      D DE  +    R           +TR          ++    P   H  A +  L Y       GI++  G   G  ++ Y D++F +    RRSVSG ++    GA+SW  R Q+     T+E +YVA  +VVKE+LFLRQ+  FM P + +  + +F+DN+G I+LA N I++  +KHID +HH +R+  + +++ V  V S  Q AD L K L    F+ H  F++N+
Sbjct:  924 KLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWY---SGCFYERNKETGRLTISQQTFTDELAAEYGVVGGR---SVPMSSGVKLSDFDADEVATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFVMNL 1291          
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 2.740e-46
Identity = 122/375 (32.53%), Postives = 184/375 (49.07%), Query Frame = 0
Query:    3 RLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGYTGCVESANALKGGRT-----------AEPGGEGRNEEVSVPGGSGGAYVDGDEE---------------------TSGHCVRRTRC-SKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYG-GQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 343
            +L K++YGL QA R W   L   +  +GFEQ   D CVFR + +G   +++VVHVDDI A   ++    +F A+L +   ++++G+  +Y   +GC    N   G  T           AE G  G     SVP  SG    D D +                     T        R  ++    P   H  A +  L Y       GI++  G   G  ++ Y D++F +    RRSVSG ++    GA+SW  R Q+     T+E +YVA  +VVKE+LFLRQ+  FM P + +  + VF+DN+G I+LA N I++  +KHID +HH +R+  + +++ V  V S  Q AD L K L    F+ H  F++N+
Sbjct: 1430 KLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWY---SGCFYERNKETGRLTISQQTFTDELAAEYGVVGGR---SVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 1797          
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5K4U5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U5_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 4.930e-46
Identity = 117/351 (33.33%), Postives = 180/351 (51.28%), Query Frame = 0
Query:    4 LNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGYTGCVESANALKGGRTA--EPGGEGRNEEVSVPGG-----SGGAYV---DGDEETSGHCVRRTRCSKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYG-GQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 343
            L K++YGL Q+ R W   L   +  +GFEQ   D CVFR +  G   +++VVHVDDI A   ++    +F A+L +   ++++G+  +Y   +GC+   +   G  T   +   +    E  VPGG     S G  +   D DEE +    R              H    +  L Y       G+++  G   G  ++ Y D++F +    RRSVSG ++    G +SW  R Q+     T+E +YVA  +VVKE+LFLRQV  FM P + +  + VF+DN+G I+LA N I++  +KHID +HH +R+  + ++V V  V S  Q AD L K L    F+ H  F++N+
Sbjct: 1236 LGKSLYGLRQSPRQWHAMLKRCLVALGFEQCMADACVFRLIEGGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWY---SGCLYERSKETGRLTISQQTFADELAAEYGVPGGKSVPMSSGVKLSDFDADEEATDFPFREL-----------VHWDEAMAILGYAKRTSYMGVSFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGVVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQVWRFMLPKVSMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEVSVIHVPSPYQRADFLTKSLPKDAFESHLDFVMNL 1571          
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 1.130e-45
Identity = 114/369 (30.89%), Postives = 188/369 (50.95%), Query Frame = 0
Query:    3 RLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGY-------TGCVESANALKGGRTAEPGGEGRNEEVSVPGGSGGAYVDGDEETSGHCVR-----------RTR---------CSKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYG-GQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 343
            +LNK++YGL QA R W   L   +  +GF Q   D CVFR + EG   + +VVHVDDI +  +++    +F  +L     ++++GD  +Y G         G ++ +            G    +E+ +P G   +  D DEE      R           +TR          ++    P   H +A +  L Y++   + GIT+  G   GL +E + D+++ +    RRSVSG ++M   G ISW  R Q+     T+E +YV+ ++V+KE+LFLRQV  FM P   +  + VF+DN+G I+LA N I++  +KHID +HH +R+    +++ +  V S  Q+A+ L K L    F+ H  +++++
Sbjct:  765 KLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHAEFLTKALHAGDFEFHRNYVMSM 1132          
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 4.880e-45
Identity = 117/373 (31.37%), Postives = 186/373 (49.87%), Query Frame = 0
Query:    3 RLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMG--YTGCVE------SANALKGGRTAEPGGE-GRNEEVSVPGGSGGAYVDGDEETSGHCV-------------RRTR---------CSKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYG-GQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 343
            +L K++YGL QA R W   L   +  +GF Q   D CVFR + EG   M++VVHVDDI A  + +    +F  +L +   ++++G+  +Y    Y   VE      S         AE G E GR    SVP        D DE  +   V              +TR          ++    P   H KA +  L Y+      GIT+  G   G+ ++ + D+++ +    RRSVSG ++M   G ++W  R Q+     T+E +YVA ++V+KE+LFLRQV  FM P   +  + VF+DN+G I++  N I +  +KHID +HH +R+  + +++ +  V ++ Q+AD L K +  + F  H  F++N+
Sbjct:    8 KLCKSLYGLKQASRHWHAHLTRCLLLLGFLQCLADACVFRLMEEGRVIMIIVVHVDDIFAVGQKERC-DKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGR----SVPLPVSVKLTDFDENEASADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALHRDFVMNL 375          
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5JWY8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWY8_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 1.250e-44
Identity = 113/369 (30.62%), Postives = 189/369 (51.22%), Query Frame = 0
Query:    1 VGRLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGYTGCVESANAL-KGGRTAEPGGEGRNEEVSVPGGSGGAY-------------VDGDEETSGHCVRRTRCS------------KVLRKPGPAHKKAVVKTLQYLLHMKEGGITYGGQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 343
            V ++ +A+Y L Q+GR W  +  D +   G+EQ + DPCVFRKVV+GE   ++V++VDDIL  A D+       A L +KF ++D+G+  +Y G    ++  N + K  +TA      +  +V+    +  A              VD     +  C+  T+ +            K+ + P      A+V+ + YL   K+ GITY  +G GL +  + D+++      RRS +G  + +    +    + Q VTA  TSE +Y+A  E VKE LF+R V  F+ P    + + V +DN+G + +  N  +S R+KHID + H +R+   + K+    V + +Q+AD+L K LG +K + H K ++N+
Sbjct:    5 VVKVERALYRLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAYVESMLKRFDVTTTAFTPAATDADLGPKRDDEPAVDKPVREAIGCLMWTKLTRPDIALPLNKLQKIAQSPTGRIWNALVRIMSYLNFTKDFGITYV-RGSGLDLSVFVDASYADNEVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTSEAEYMAAGEGVKEALFVRGVLSFIAPETSGAKIKVLEDNKGALAMFENPFSSARSKHIDVRFHFIRELFKSGKITAEYVPTGEQHADMLTKVLGREKSEYHRKALMNL 371          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLN0_9PHAE1.090e-4831.17Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JFG2_9PHAE1.290e-4832.53Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KCN6_9PHAE4.770e-4832.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE2.310e-4731.17Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JG40_9PHAE1.390e-4632.80Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5J4N2_9PHAE2.740e-4632.53Integrase catalytic domain-containing protein n=18... [more]
A0A6H5K4U5_9PHAE4.930e-4633.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K2R1_9PHAE1.130e-4530.89Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5L4G9_9PHAE4.880e-4531.37Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JWY8_9PHAE1.250e-4430.62Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..95
e-value: 2.6E-17
score: 63.3
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 148..333
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 148..333

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..95
e-value: 2.6E-17
score: 63.3
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 148..333
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 148..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig1013contigF-distichus_contig1013:5114..6247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig1013.102.1mRNA_F-distichus_contig1013.102.1Fucus distichus monoicousmRNAF-distichus_contig1013 5114..6247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig1013.102.1 ID=prot_F-distichus_contig1013.102.1|Name=mRNA_F-distichus_contig1013.102.1|organism=Fucus distichus monoicous|type=polypeptide|length=345bp
VGRLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAE
MVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGYTGCVE
SANALKGGRTAEPGGEGRNEEVSVPGGSGGAYVDGDEETSGHCVRRTRCS
KVLRKPGPAHKKAVVKTLQYLLHMKEGGITYGGQGCGLCIEAYTDSNFGT
CLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELL
FLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLV
RDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNIV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like