prot_F-distichus_contig101294.99.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig101294.99.1
Unique Nameprot_F-distichus_contig101294.99.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length79
Homology
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: D7G7C2_ECTSI (Rep_fac_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C2_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 2.940e-47
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0
Query:    1 EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 79
            EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRY+VQ
Sbjct:   30 EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYVVQ 108          
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: A0A835YV35_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV35_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.040e-40
Identity = 65/79 (82.28%), Postives = 75/79 (94.94%), Query Frame = 0
Query:    1 EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 79
            +DGEIPHLLFYGP+G+GK+TR+LALLK I+GPGAERV LEHR+FKTPSNR +ELTTVASNYHIEMSPGDAG YDR++VQ
Sbjct:   30 KDGEIPHLLFYGPSGAGKRTRILALLKEIFGPGAERVHLEHRTFKTPSNRTIELTTVASNYHIEMSPGDAGTYDRFVVQ 108          
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: A0A8J2WW47_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WW47_9STRA)

HSP 1 Score: 127 bits (319), Expect = 8.830e-34
Identity = 57/79 (72.15%), Postives = 69/79 (87.34%), Query Frame = 0
Query:    1 EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 79
            EDG+IPHLLFYGP+G+GKKTRV  LLK +YG GAE+ RLEHR FKTP+N+ +E+TTVASNYHIEM+P DAG  DR++VQ
Sbjct:   30 EDGDIPHLLFYGPSGAGKKTRVQCLLKALYGAGAEKQRLEHREFKTPTNKTIEVTTVASNYHIEMNPSDAGNNDRFVVQ 108          
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: F0XVP2_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVP2_AURAN)

HSP 1 Score: 127 bits (318), Expect = 1.170e-33
Identity = 55/78 (70.51%), Postives = 70/78 (89.74%), Query Frame = 0
Query:    2 DGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 79
            DG+IPHLLFYGP+G+GKKTR++ALL+ +YG GAE+ RLEHR FKTP+N+ +E+TTVASNYHIE++P DAG  DRY+VQ
Sbjct:   31 DGDIPHLLFYGPSGAGKKTRIMALLRALYGAGAEKQRLEHRDFKTPTNKAIEVTTVASNYHIEINPSDAGNNDRYVVQ 108          
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: A0A812Q6K0_9DINO (RFC3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q6K0_9DINO)

HSP 1 Score: 120 bits (302), Expect = 4.160e-32
Identity = 51/76 (67.11%), Postives = 68/76 (89.47%), Query Frame = 0
Query:    4 EIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 79
            +IPH++FYGP+G+GKKTRV+  L+ ++G G E+++LEHRS KTPS R VE+TTVAS+YHIEM+PGDAG+YDR+IVQ
Sbjct:   33 DIPHMMFYGPSGAGKKTRVMGFLRAVFGSGVEKLKLEHRSVKTPSRRTVEITTVASSYHIEMNPGDAGMYDRFIVQ 108          
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: A0A7S2SEJ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEJ8_9STRA)

HSP 1 Score: 122 bits (307), Expect = 4.830e-32
Identity = 54/78 (69.23%), Postives = 67/78 (85.90%), Query Frame = 0
Query:    2 DGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 79
            DG++PHL+ YGP+G+GKKTR+ ALL+ +YG   ER RL+HRSFKTPSNR VELTT+ASNYHIEM+  DAGIYDR ++Q
Sbjct:   31 DGDLPHLIVYGPSGAGKKTRINALLREMYGSAVERRRLDHRSFKTPSNRTVELTTIASNYHIEMNASDAGIYDRIVIQ 108          
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: A0A8D8VB17_9HEMI (Replication factor C subunit 3 n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8VB17_9HEMI)

HSP 1 Score: 119 bits (297), Expect = 5.610e-32
Identity = 49/78 (62.82%), Postives = 67/78 (85.90%), Query Frame = 0
Query:    1 EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIV 78
            ++G+ PHLLFYGP+G+GKKTR++ALLK +YGPG ER+R+EH SF TPS + +++ T ASNYHIE++P DAG+YDR +V
Sbjct:   31 KEGDFPHLLFYGPSGAGKKTRIMALLKELYGPGVERLRMEHMSFLTPSKKKIDIMTTASNYHIEVNPSDAGMYDRVVV 108          
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: A0A1R0GWM7_9FUNG (Replication factor C subunit 5 n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GWM7_9FUNG)

HSP 1 Score: 117 bits (292), Expect = 9.940e-32
Identity = 50/79 (63.29%), Postives = 68/79 (86.08%), Query Frame = 0
Query:    1 EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 79
            E  +IPHL+FYGP GSGKKTR++ALL++I+G GAE++R++ RSF TPS+R VE+  ++SNYHIE++P DAGIYDR +VQ
Sbjct:   46 ETSDIPHLMFYGPEGSGKKTRIMALLRQIFGAGAEKIRMDTRSFSTPSSRTVEINMLSSNYHIEINPSDAGIYDRIVVQ 124          
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: A0A7S1ZPB1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZPB1_TRICV)

HSP 1 Score: 120 bits (301), Expect = 1.830e-31
Identity = 51/79 (64.56%), Postives = 68/79 (86.08%), Query Frame = 0
Query:    1 EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 79
            +   +PHLLFYGP+GSGKKTR++ALL+ IYGPGAER+RL+ R+F TP+ R VE+  ++SNYH+E+SPGDAG+ DRY+VQ
Sbjct:   28 DPASLPHLLFYGPSGSGKKTRIMALLRAIYGPGAERLRLDKRTFTTPTKRTVEVNMISSNYHVEISPGDAGLNDRYVVQ 106          
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: A0A7S2RDB4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RDB4_9STRA)

HSP 1 Score: 118 bits (296), Expect = 3.290e-31
Identity = 52/79 (65.82%), Postives = 67/79 (84.81%), Query Frame = 0
Query:    1 EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 79
            E G+IPHLLFYGP+G+GKKTRV+ LL+ ++GPG ++VRLEHR+FKT S + +ELTT+ SNYHIEM+P DAG  DR +VQ
Sbjct:   30 ETGDIPHLLFYGPSGAGKKTRVMCLLREMFGPGVQKVRLEHRTFKTASGKPIELTTLGSNYHIEMNPSDAGNNDRLVVQ 108          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7C2_ECTSI2.940e-4798.73Rep_fac_C domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YV35_9STRA2.040e-4082.28P-loop containing nucleoside triphosphate hydrolas... [more]
A0A8J2WW47_9STRA8.830e-3472.15Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0XVP2_AURAN1.170e-3370.51AAA domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A812Q6K0_9DINO4.160e-3267.11RFC3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A7S2SEJ8_9STRA4.830e-3269.23Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8D8VB17_9HEMI5.610e-3262.82Replication factor C subunit 3 n=1 Tax=Cacopsylla ... [more]
A0A1R0GWM7_9FUNG9.940e-3263.29Replication factor C subunit 5 n=1 Tax=Smittium mu... [more]
A0A7S1ZPB1_TRICV1.830e-3164.56Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2RDB4_9STRA3.290e-3165.82Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..79
e-value: 2.5E-15
score: 58.9
NoneNo IPR availablePANTHERPTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITcoord: 3..79
NoneNo IPR availablePANTHERPTHR11669:SF1REPLICATION FACTOR C SUBUNIT 3coord: 3..79
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..44

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..79
e-value: 2.5E-15
score: 58.9
NoneNo IPR availablePANTHERPTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITcoord: 3..79
NoneNo IPR availablePANTHERPTHR11669:SF1REPLICATION FACTOR C SUBUNIT 3coord: 3..79
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101294contigF-distichus_contig101294:675..911 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101294.99.1mRNA_F-distichus_contig101294.99.1Fucus distichus monoicousmRNAF-distichus_contig101294 675..911 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig101294.99.1 ID=prot_F-distichus_contig101294.99.1|Name=mRNA_F-distichus_contig101294.99.1|organism=Fucus distichus monoicous|type=polypeptide|length=79bp
EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNR
VVELTTVASNYHIEMSPGDAGIYDRYIVQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase