mRNA_F-distichus_contig101294.99.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: D7G7C2_ECTSI (Rep_fac_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C2_ECTSI) HSP 1 Score: 162 bits (410), Expect = 2.940e-47 Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 1
Query: 1 EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 237
EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRY+VQ
Sbjct: 30 EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYVVQ 108
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: A0A835YV35_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV35_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.040e-40 Identity = 65/79 (82.28%), Postives = 75/79 (94.94%), Query Frame = 1
Query: 1 EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 237
+DGEIPHLLFYGP+G+GK+TR+LALLK I+GPGAERV LEHR+FKTPSNR +ELTTVASNYHIEMSPGDAG YDR++VQ
Sbjct: 30 KDGEIPHLLFYGPSGAGKRTRILALLKEIFGPGAERVHLEHRTFKTPSNRTIELTTVASNYHIEMSPGDAGTYDRFVVQ 108
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: A0A8J2WW47_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WW47_9STRA) HSP 1 Score: 127 bits (319), Expect = 8.830e-34 Identity = 57/79 (72.15%), Postives = 69/79 (87.34%), Query Frame = 1
Query: 1 EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 237
EDG+IPHLLFYGP+G+GKKTRV LLK +YG GAE+ RLEHR FKTP+N+ +E+TTVASNYHIEM+P DAG DR++VQ
Sbjct: 30 EDGDIPHLLFYGPSGAGKKTRVQCLLKALYGAGAEKQRLEHREFKTPTNKTIEVTTVASNYHIEMNPSDAGNNDRFVVQ 108
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: F0XVP2_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVP2_AURAN) HSP 1 Score: 127 bits (318), Expect = 1.170e-33 Identity = 55/78 (70.51%), Postives = 70/78 (89.74%), Query Frame = 1
Query: 4 DGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 237
DG+IPHLLFYGP+G+GKKTR++ALL+ +YG GAE+ RLEHR FKTP+N+ +E+TTVASNYHIE++P DAG DRY+VQ
Sbjct: 31 DGDIPHLLFYGPSGAGKKTRIMALLRALYGAGAEKQRLEHRDFKTPTNKAIEVTTVASNYHIEINPSDAGNNDRYVVQ 108
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: A0A812Q6K0_9DINO (RFC3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q6K0_9DINO) HSP 1 Score: 120 bits (302), Expect = 4.160e-32 Identity = 51/76 (67.11%), Postives = 68/76 (89.47%), Query Frame = 1
Query: 10 EIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 237
+IPH++FYGP+G+GKKTRV+ L+ ++G G E+++LEHRS KTPS R VE+TTVAS+YHIEM+PGDAG+YDR+IVQ
Sbjct: 33 DIPHMMFYGPSGAGKKTRVMGFLRAVFGSGVEKLKLEHRSVKTPSRRTVEITTVASSYHIEMNPGDAGMYDRFIVQ 108
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: A0A7S2SEJ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEJ8_9STRA) HSP 1 Score: 122 bits (307), Expect = 4.830e-32 Identity = 54/78 (69.23%), Postives = 67/78 (85.90%), Query Frame = 1
Query: 4 DGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 237
DG++PHL+ YGP+G+GKKTR+ ALL+ +YG ER RL+HRSFKTPSNR VELTT+ASNYHIEM+ DAGIYDR ++Q
Sbjct: 31 DGDLPHLIVYGPSGAGKKTRINALLREMYGSAVERRRLDHRSFKTPSNRTVELTTIASNYHIEMNASDAGIYDRIVIQ 108
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: A0A8D8VB17_9HEMI (Replication factor C subunit 3 n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8VB17_9HEMI) HSP 1 Score: 119 bits (297), Expect = 5.610e-32 Identity = 49/78 (62.82%), Postives = 67/78 (85.90%), Query Frame = 1
Query: 1 EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIV 234
++G+ PHLLFYGP+G+GKKTR++ALLK +YGPG ER+R+EH SF TPS + +++ T ASNYHIE++P DAG+YDR +V
Sbjct: 31 KEGDFPHLLFYGPSGAGKKTRIMALLKELYGPGVERLRMEHMSFLTPSKKKIDIMTTASNYHIEVNPSDAGMYDRVVV 108
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: A0A1R0GWM7_9FUNG (Replication factor C subunit 5 n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GWM7_9FUNG) HSP 1 Score: 117 bits (292), Expect = 9.940e-32 Identity = 50/79 (63.29%), Postives = 68/79 (86.08%), Query Frame = 1
Query: 1 EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 237
E +IPHL+FYGP GSGKKTR++ALL++I+G GAE++R++ RSF TPS+R VE+ ++SNYHIE++P DAGIYDR +VQ
Sbjct: 46 ETSDIPHLMFYGPEGSGKKTRIMALLRQIFGAGAEKIRMDTRSFSTPSSRTVEINMLSSNYHIEINPSDAGIYDRIVVQ 124
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: A0A7S1ZPB1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZPB1_TRICV) HSP 1 Score: 120 bits (301), Expect = 1.830e-31 Identity = 51/79 (64.56%), Postives = 68/79 (86.08%), Query Frame = 1
Query: 1 EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 237
+ +PHLLFYGP+GSGKKTR++ALL+ IYGPGAER+RL+ R+F TP+ R VE+ ++SNYH+E+SPGDAG+ DRY+VQ
Sbjct: 28 DPASLPHLLFYGPSGSGKKTRIMALLRAIYGPGAERLRLDKRTFTTPTKRTVEVNMISSNYHVEISPGDAGLNDRYVVQ 106
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Match: A0A7S2RDB4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RDB4_9STRA) HSP 1 Score: 118 bits (296), Expect = 3.290e-31 Identity = 52/79 (65.82%), Postives = 67/79 (84.81%), Query Frame = 1
Query: 1 EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYIVQ 237
E G+IPHLLFYGP+G+GKKTRV+ LL+ ++GPG ++VRLEHR+FKT S + +ELTT+ SNYHIEM+P DAG DR +VQ
Sbjct: 30 ETGDIPHLLFYGPSGAGKKTRVMCLLREMFGPGVQKVRLEHRTFKTASGKPIELTTLGSNYHIEMNPSDAGNNDRLVVQ 108 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101294.99.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig101294.99.1 >prot_F-distichus_contig101294.99.1 ID=prot_F-distichus_contig101294.99.1|Name=mRNA_F-distichus_contig101294.99.1|organism=Fucus distichus monoicous|type=polypeptide|length=79bp EDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRback to top mRNA from alignment at F-distichus_contig101294:675..911+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig101294.99.1 ID=mRNA_F-distichus_contig101294.99.1|Name=mRNA_F-distichus_contig101294.99.1|organism=Fucus distichus monoicous|type=mRNA|length=237bp|location=Sequence derived from alignment at F-distichus_contig101294:675..911+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig101294:675..911+ >mRNA_F-distichus_contig101294.99.1 ID=mRNA_F-distichus_contig101294.99.1|Name=mRNA_F-distichus_contig101294.99.1|organism=Fucus distichus monoicous|type=CDS|length=474bp|location=Sequence derived from alignment at F-distichus_contig101294:675..911+ (Fucus distichus monoicous)back to top |