prot_F-distichus_contig101219.93.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig101219.93.1
Unique Nameprot_F-distichus_contig101219.93.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length123
Homology
[Close]
BLAST of mRNA_F-distichus_contig101219.93.1 vs. uniprot
Match: D8LQZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQZ7_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 9.770e-27
Identity = 54/94 (57.45%), Postives = 65/94 (69.15%), Query Frame = 0 
Query:   30 PLSPWEMELAKVAGTWKGSGAITNEKERCRQWCQMAKASLGPPRDRXXXXXXXXXXXXXXXXXXXRQRLRKLIDAAELNMSFFLVPGLSDKQVM 123
            PLSPWEMELAK AGTW+G+G + +EKERCRQWC +AKASL    ++                    QRLR+L+DAAELN SFFLVPGL+DKQV+
Sbjct:   87 PLSPWEMELAKAAGTWEGTGGVGDEKERCRQWCMIAKASL-QAEEKEREKDNRRGEGKLTGGTARHQRLRQLVDAAELNSSFFLVPGLNDKQVL 179
[Close]
BLAST of mRNA_F-distichus_contig101219.93.1 vs. uniprot
Match: A0A6H5L231_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L231_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 2.670e-13
Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 0 
Query:   30 PLSPWEMELAKVAGTWKGSGAITNEKERCRQWCQMAKASL 69
            PLSPWEMELAK AGTW+G G + +EKERCRQWC +AKASL
Sbjct:  555 PLSPWEMELAKAAGTWEGPGGVGDEKERCRQWCMIAKASL 594
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101219.93.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQZ7_ECTSI9.770e-2757.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L231_9PHAE2.670e-1377.50Protein kinase domain-containing protein n=1 Tax=E... [more]
back to top
InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 88..108

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 88..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101219contigF-distichus_contig101219:86..1455 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101219.93.1mRNA_F-distichus_contig101219.93.1Fucus distichus monoicousmRNAF-distichus_contig101219 86..1455 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig101219.93.1 ID=prot_F-distichus_contig101219.93.1|Name=mRNA_F-distichus_contig101219.93.1|organism=Fucus distichus monoicous|type=polypeptide|length=123bp
MELDEAEPPLPPPPPARLLQLPPPPPPLPPLSPWEMELAKVAGTWKGSGA
ITNEKERCRQWCQMAKASLGPPRDREREKEGHVSTSILDKDKDRRQRLRK
LIDAAELNMSFFLVPGLSDKQVM
back to top